These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3363#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3157 fasta sequence [TTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAATCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGGGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGGAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTCGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTATTCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTACACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGCACACTACTGAAGACGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAA-GGAAGATGCCAGAT-GGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAG-AATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCAT-GCGGA-GTGCTCTCAGTGAAACAGACTTGGC-GGAGCTG-AAGGACA-GGTTTGCTGTACACTT-GTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAAGATTCTCGTTGTTAATGTACATCCATCATGATTTCCAATTCAGTTTCTTCTTAGCGTTGAAGTGAAATACCGTTGTGATTGAGGCTGCTAATATGCTATGAATGACTGGAGCCCAACTTACAGTGAATGCACATGAAAGTAAC] [+] EMBL AK065797 [TTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAATCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGGGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGGAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTCGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTATTCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTACACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGCACACTACTGAAGACGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAA GGAAGATGCCAGAT GGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAG AATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCAT GCGGA GTGCTCTCAGTGAAACAGACTTGGC GGAGCTG AAGGACA GGTTTGCTGTACACTT GTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAAGATTCTCGTTGTTAATGTACATCCATCATGATTTCCAATTCAGTTTCTTCTTAGCGTTGAAGTGAAATACCGTTGTGATTGAGGCTGCTAATATGCTATGAATGACTGGAGCCCAACTTACAGTGAATGCACATGAAAGTAAC] [+] EMBL CA767069 [ AAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGAACACTACTGAAGATGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGAGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTNCAGAGCCTGAGAAAGGTTCAATTACTAATTATGTGAAAACAAAGAAAAGGGAAGATGCCAGATGGGAATTTGTGAANGAATGCCTGAGATGGTTTCAGNTACTAATGATGNGGAAACAAAGAAGAGGAAGATGNCAGATAGAAATTTGNGAAGGAATGATGCTTGNACAGAACGGTCTCAAGATCATGGCGGAGGGGCTCTCAGNGNAACANACTTGGCGGGAGCTGAAAGGACAGGGTTTGCTGTACACTTGGTCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||