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Oryza sativa
cluster # 3373 cluster # 3373       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3373#0 length = 2129 sequences # 2  

consensusID : consensus_3373#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2129
fasta sequence
                              [AAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGTATTTTGCTCGGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGTGGAATGGATGGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTGGTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGCCTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTTTGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTATTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTTTCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGGTCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACTCATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTGACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCGACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGATGGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTGTTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTGCTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGGCTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACACAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAACCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCATTGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTATGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTGAGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGTTTGTGTACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGCCTATGCAT-GTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATGGCAG-AAAAGGGTCCTA-TTTGGCTGTATGGCA-CCT-CCAAGTCTCCAAC-TTCAAATCTAACTTCAAAACA-TTTTGGA-GTTGGATCT-GGGATT-AGGTTAGGTGCTAATGTGAGACTTTCTGTTCATACTTTGTATTAAGATTAGATTATTAATTCACTTT]

[+] EMBL AK111400             [AAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGTATTTTGCTCGGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGTGGAATGGATGGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTGGTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGCCTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTTTGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTATTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTTTCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGGTCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACTCATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTGACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCGACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGATGGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTGTTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTGCTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGGCTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACACAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAACCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCATTGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTATGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTGAGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGTTTGTGTACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGCCTATGCAT GTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATGGCAG AAAAGGGTCCTA TTTGGCTGTATGGCA CCT CCAAGTCTCCAAC TTCAAATCTAACTTCAAAACA TTTTGGA GTTGGATCT GGGATT AGGTTAGGTGCTAATGTGAGACTTTCTGTTCATACTTTGTATTAAGATTAGATTATTAATTCACTTT]
[+] EMBL CA767145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAGTGCCTGATACGATCTGCAAAACACGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTTAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGGAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCCTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAAGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGGTTGNGTACACGAAANTTACCTGGCTTNCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGNCTATGCATGGTTAATGNACTGGAGACATCCTGTAACTCTATAAGAGATGGCAGAAAAAGGGTCCTATTTTGGCTGGATGGCACCCTNCCAAGTCTCCAACTTTCAAATCTAACTTCAAAACATTTTTGGAGGTTGGATCTGGGGATTAAGGTTAAGGGCcctaa                                                   ]


>consensus_3373#0 AAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGTATTTTGCTC GGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGTGGAATGGAT GGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTG GTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGC CTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTT TGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTA TTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTT TCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGG TCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACT CATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTG ACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCG ACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGAT GGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTG TTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTG CTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGG CTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACA CAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAA CCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCAT TGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTA TGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTG AGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAAT GTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTC AATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTG AAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTC TTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAA GGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCC CGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCA TTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGG CATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCA AAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGG GCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGTTTGTGT ACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAA CTGCCTATGCATGTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATGGCAGAAAA GGGTCCTATTTGGCTGTATGGCACCTCCAAGTCTCCAACTTCAAATCTAACTTCAAAACA TTTTGGAGTTGGATCTGGGATTAGGTTAGGTGCTAATGTGAGACTTTCTGTTCATACTTT GTATTAAGATTAGATTATTAATTCACTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)