These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3373#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2129 fasta sequence [AAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGTATTTTGCTCGGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGTGGAATGGATGGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTGGTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGCCTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTTTGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTATTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTTTCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGGTCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACTCATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTGACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCGACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGATGGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTGTTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTGCTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGGCTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACACAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAACCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCATTGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTATGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTGAGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGTTTGTGTACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGCCTATGCAT-GTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATGGCAG-AAAAGGGTCCTA-TTTGGCTGTATGGCA-CCT-CCAAGTCTCCAAC-TTCAAATCTAACTTCAAAACA-TTTTGGA-GTTGGATCT-GGGATT-AGGTTAGGTGCTAATGTGAGACTTTCTGTTCATACTTTGTATTAAGATTAGATTATTAATTCACTTT] [+] EMBL AK111400 [AAACACACTCACATCGACAATTTTGCTGCTGGTTATTTTTGTTGTAGTAGTATTTTGCTCGGTGGCTATTGTTTTGTAGCAAGCAGGAGTTGTTCAGCCCTCAGATGGTGTGGAATGGATGGAATCTGAAATGATCTTCTGATTGTTTTTTAATTTTTTTTTGTGCAGCTGTGCTAATTGGTCCAATTGCTGCCGCCATCATCTTTTTGGGGAATTCTGCTGTTATTATCGGCCTGTGGCCTGCTCATTTCATATGGACATACTACTGTGTTCTGAAAGCGGAGCGTATTGGACTAGTTTTGAAGATCCTTGCTGCGATACTGCTGCCATTGCCTTTGCTCCTGTTGCCAGTACTTGCTATTTCTGGGAGCCTTCTGGGTGGTATAGGATATGGAGTTTTCATTCCACTAATGGCAACTTTCGAGGCTGTGGGTGAGGGTGTCGCGGACAAGCTCACCCATTGTTTTTTGGATGGCACGGTCAGTACAACAGCCGGAGCTTGCACGGTGGTGCGTGATGCTACCGATTTCTGCTTCCACTCATACTTCTCTCTTATGGATGAGCTCATAAGAAAATTGGGAGATAATGAAACTCCTCTTGACATCAAACTGTCTTATCTACCACACAGCATGCTTGCTGTTCTTATTGCTGTTCCTTTCGACGTATTCATGATAAGTGGAGTGGCATTGTGGAAAAGCCCCTGCATGTTGTTGAAAGGATGGCAAAGGCTGTGCGAGGACTTGGTTGGAAGGGAAGGACCGTTTCTAGAAACAGTCTGTGTTCCTTTCGCTGGTTTGTCTATCATATTATGGCCACTTGCTGTAATTGGGGCAGTAGTTGCTTCATTTCTTAGCAGCTTCTTTTTTGGTATGCGTGCTGGATTAATTGCTTATCAGGAGGCTTCTCTCCAAATGGGACTAGCATATATGGTTTCAGCAGTAGCATTGTTCGACGAATACACAAATGATATGCTTTACTTAAGAGAAGGCTCATGTTTTCCAAGGCCCAAGTACCGAAAAACCGATAGGATGAATAACGAGACTGGTCAGAACAATGAAGTGCGCAATGCTACATCTCCATTGGGAGAAAAGAAACACCACCATAAAACCATGAAGGCTTTGCAGCGATCAAAGACATTTATGGAAGCTATCCAGCGGCTTAGACCAATTCAAATATGGGATTGGCTCTTCCGATCTTGTGAGCTGAATGGAAGGATATTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAATGCCTGATACGATCTGCAAAACATGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTCAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGAAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCGTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAGGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGTTTGTGTACACGAAATTTACCTGGCTTCCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGCCTATGCAT GTTAATGTACTGGAGACATCCTGTAACTCTGTAAGAGATGGCAG AAAAGGGTCCTA TTTGGCTGTATGGCA CCT CCAAGTCTCCAAC TTCAAATCTAACTTCAAAACA TTTTGGA GTTGGATCT GGGATT AGGTTAGGTGCTAATGTGAGACTTTCTGTTCATACTTTGTATTAAGATTAGATTATTAATTCACTTT] [+] EMBL CA767145 [ TTACTGGGTGAGGGATTGATTAGTGCTGAGGACATGGAAGAATGTATCATCAAAGGAAAATGCAAGAAATTAAGCATAAAGTTGCCTGCCTGGTGCATCCTTCAGTGCCTGATACGATCTGCAAAACACGATTCGCATGGTTTGCTCATATCTGACGATGTTGAAGTGACAAACTTTAACTGGCCTAAAGACAAAGTGTTTGACTGGATGCTTGGACCACTTCTTGTTATTAAGGAGCAAATGGAGCAATTAGAGCTAACTGAAGATGAGGAACTATGCTTAAGGAGGCTCATCATGACAAATAACAATGATAAACCATCTGACTGGGACGATTGTGGTTTCCCGTCAAGCGATAATATAAGGAGAGCTCGGCTGCAAGCGATAATCAGAAGGTTGCAAGGCATTGTTGTCAATTTGTCCTGGGTACCGAGCTTCAGGAGACGATTCATCGATCTGGTTAAGGCATTGTATCTCGAGGCGGTCGAGGCAGGCGCGATCGACGGCTCAAGGAGCGTGAAGCGCAAAATCGAGGCTGATGCTGCTTCTGCTCCTGGAAGCAAGTTTGATGACAAAGATGGGGAAGGCTCATCAAAGGGCGCAGCAGCAGTGGGCATTGATGCAGTGTGATATCTACTGGTTGNGTACACGAAANTTACCTGGCTTNCATCATGCATTCTGCTGGGCCTTTTTTTTTTTCTGGTAACTGNCTATGCATGGTTAATGNACTGGAGACATCCTGTAACTCTATAAGAGATGGCAGAAAAAGGGTCCTATTTTGGCTGGATGGCACCCTNCCAAGTCTCCAACTTTCAAATCTAACTTCAAAACATTTTTGGAGGTTGGATCTGGGGATTAAGGTTAAGGGCcctaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||