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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3395 cluster # 3395       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3395#0 length = 913 sequences # 2  

consensusID : consensus_3395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 913
fasta sequence
                              [GCACACTCTTCCGGTCTTCCCCACCGTTTGTCGCCTTTCATGTCGCCGGAGAAATCGCCGGAGTCCTCAGTAGTTCGGGAACAAAGAGTTACAATTTCAAACAAGCATGGGGAAAATCTTGTTGGTCTACTGCATCAAGCATGTTCAAAGAATCTTGTGATCCTTTGCCATGGATTCCGAGCTACAAAGGATGATAGCATCTTGGTTGACCTTGCTTATGCACTAACAAGGGAAGGTGTTAGTGCTTTTCGGTTTGGTTTTGCTGGAAATGGGGAAAGTGAGGGTCAGTTCCAGTATGGAAACTACCGAAGAGAGGCAGATGACTTGCACTCTGTTGTATCATACTTCACAGAACAGGAATATAATATAATTGGTCTTGTTGGGCACAGCAAAGGAGGAAATGCCGTGCTTTTGTATGCTTCCATGAACCATGATATTCCTGTCATTGTCAACATTTCTGGACGCTTTGCGTTAGAGCGTGGTATTGATGGGCGCCTGGGGAAAAATTTCATGCAGAGAATAAAGAAAGATGGATACATAGATGTCAGGAACAGAAAAGGGGAGTTTGAGTACCAGGTGACAGAGGAAAGTCTGAAAGATCGGCTGAGCACAGATACCCTTCTTTCAAGCCGNTCCATAAGCAAATGCTGCAGGGTCCTCACAATCCATGGCTNCAAGGATGAAATTGNTCCGGTGGAAGACGCCCCTGATGTTCGCGGCAAATATNCCCAACCATGAGCTGCACATAATCGCAGAAGCCAATCATCGCTACACAGGCCATGGAGAAAGAGCTGNAAGCATTTGTACTGGACTTCATCAAGTCCCAANCCAATTTNTCGTCGTCCTTGCGCCCGAAGTTGTAACTGTTTGACCTTTGCAATCCTTGATGCTTGAAGTTTAAATGTCATACTTT]

[+] EMBL CA767404             [GCACACTCTTCCGGTCTTCCCCACCGTTTGTCGCCTTTCATGTCGCCGGAGAAATCGCCGGAGTCCTCAGTAGTTCGGGAACAAAGAGTTACAATTTCAAACAAGCATGGGGAAAATCTTGTTGGTCTACTGCATCAAGCATGTTCAAAGAATCTTGTGATCCTTTGCCATGGATTCCGAGCTACAAAGGATGATAGCATCTTGGTTGACCTTGCTTATGCACTAACAAGGGAAGGTGTTAGTGCTTTTCGGTTTGGTTTTGCTGGAAATGGGGAAAGTGAGGGTCAGTTCCAGTATGGAAACTACCGAAGAGAGGCAGATGACTTGCACTCTGTTGTATCATACTTCACAGAACAGGAATATAATATAATTGGTCTTGTTGGGCACAGCAAAGGAGGAAATGCCGTGCTTTTGTATGCTTCCATGAACCATGATATTCCTGTCATTGTCAACATTTCTGGACGCTTTGCGTTAGAGCGTGGTATTGATGGGCGCCTGGGGAAAAATTTCATGCAGAGAATAAAGAAAGATGGATACATAGATGTCAGGAACAGAAAAGGGGAGTTTGAGTACCAGGTGACAGAGGAAAGTCTGAAAGATCGGCTGAGCACAGATACCCTTCTTTCAAGCCGNTCCATAAGCAAATGCTGCAGGGTCCTCACAATCCATGGCTNCAAGGATGAAATTGNTCCGGTGGAAGACGCCCCTGATGTTCGCGGCAAATATNCCCAACCATGAGCTGCACATAATCGCAGAAGCCAATCATCGCTACACAGGCCATGGAGAAAGAGCTGNAAGCATTTGTACTGGACTTCATCAAGTCCCAANCCAATTTNTCGTCGTCCTTGCGCCCGAAGT                                                       ]
[+] EMBL AK103672             [                    CCACCGTTTGTCGCCTTTCATGTCGCCGGAGAAATCGCCGGAGTCCTCAGTAGTTCGGGAACAAAGAGTTACAATTTCAAACAAGCATGGGGAAAATCTTGTTGGTCTACTGCATCAAGCATGTTCAAAGAATCTTGTGATCCTTTGCCATGGATTCCGAGCTACAAAGGATGATAGCATCTTGGTTGACCTTGCTTATGCACTAACAAGGGAAGGTGTTAGTGCTTTTCGGTTTGATTTTGCTGGAAATGGGGAAAGTGAGGGTCAGTTCCAGTATGGAAACTACCGAAGAGAGGCAGATGACTTGCACTCTGTTGTATCATACTTCACAGAACAGGAATATAATATAATTGGTCTTGTTGGGCACAGCAAAGGAGGAAATGCCGTGCTTTTGTATGCTTCCATGAACCATGATATTCCTGTCATTGTCAACATTTCTGGACGCTTTGCGTTAGAGCGTGGTATTGATGGGCGCCTGGGGAAAAATTTCATGCAGAGAATAAAGAAAGATGGATACATAGATGTCAGGAACAGAAAAGGGGAGTTTGAGTACCAGGTGACAGAGGAAAGTCTGAAAGATCGGCTGAGCACAGATACCCTTCTTTCAAGCCGTTCCATAAGCAAATGCTGCAGGGTCCTCACAATCCATGGCTCCAAGGATGAAATTGTTCCGGTGGAAGACG CCCTGATGTTCGCGGCAAATATCCCCAACCATGAGCTGCACATAATCGCAGAAGCCAATCATCGCTACACAGGCCAT GAGAAAGAGCTGAAAGCATTTGTACTGGACTTCATCAAGTCCCAACCCAATTTCTCGTCGTCCTTGCGCCCGAAGTTGTAACTGTTTGACCTTTGCAATCCTTGATGCTTGAAGTTTAAATGTCATACTTT]


>consensus_3395#0 GCACACTCTTCCGGTCTTCCCCACCGTTTGTCGCCTTTCATGTCGCCGGAGAAATCGCCG GAGTCCTCAGTAGTTCGGGAACAAAGAGTTACAATTTCAAACAAGCATGGGGAAAATCTT GTTGGTCTACTGCATCAAGCATGTTCAAAGAATCTTGTGATCCTTTGCCATGGATTCCGA GCTACAAAGGATGATAGCATCTTGGTTGACCTTGCTTATGCACTAACAAGGGAAGGTGTT AGTGCTTTTCGGTTTGGTTTTGCTGGAAATGGGGAAAGTGAGGGTCAGTTCCAGTATGGA AACTACCGAAGAGAGGCAGATGACTTGCACTCTGTTGTATCATACTTCACAGAACAGGAA TATAATATAATTGGTCTTGTTGGGCACAGCAAAGGAGGAAATGCCGTGCTTTTGTATGCT TCCATGAACCATGATATTCCTGTCATTGTCAACATTTCTGGACGCTTTGCGTTAGAGCGT GGTATTGATGGGCGCCTGGGGAAAAATTTCATGCAGAGAATAAAGAAAGATGGATACATA GATGTCAGGAACAGAAAAGGGGAGTTTGAGTACCAGGTGACAGAGGAAAGTCTGAAAGAT CGGCTGAGCACAGATACCCTTCTTTCAAGCCGNTCCATAAGCAAATGCTGCAGGGTCCTC ACAATCCATGGCTNCAAGGATGAAATTGNTCCGGTGGAAGACGCCCCTGATGTTCGCGGC AAATATNCCCAACCATGAGCTGCACATAATCGCAGAAGCCAATCATCGCTACACAGGCCA TGGAGAAAGAGCTGNAAGCATTTGTACTGGACTTCATCAAGTCCCAANCCAATTTNTCGT CGTCCTTGCGCCCGAAGTTGTAACTGTTTGACCTTTGCAATCCTTGATGCTTGAAGTTTA AATGTCATACTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)