cluster # 3405

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Oryza sativa
cluster # 3405 cluster # 3405 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3405#0 length = 793 sequences # 2

consensusID : consensus_3405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 793
fasta sequence

                              [CAGAGGACGAGACAAGGGGGTCTTAAGAGAAAACAACCAAAAACAAACATGCGAATTATTATGGAAAATTAACTTAAAACAAAAACAAGCTAAATTGGTATTAAACAACAAAATTATATTGCAAATAGATTGGGAAAATAATTCCAATCAAAATACAACCATTCAAATTAAAATGCAAACTGATAATTTGAAAAAAAAGATGAGAATTATAACCGATTATCAAAACGGAAAAATTGAAATCACAAACTTTGAAAATGACAAGATACAATCAAATTACGTTGTTTCCGTTTTAAAAGAAAAGAACACTTTATTAGCAATCGAAATGCACAAGAAACAAGGTAGCAAAATGGAAAAGGTTGCATTTATCCAAATTGTGAAAGACAGTTTAAATTACGCTAAAGTACATTTGAAAATTGAAAAAAGTTTACTCTATGAATTTGAAAGTTCAATAGATCAAATCAAAAATACAGTAAAACCATTAGTTAAAAGACATGTTAGAGAATTTACATTAATTCCTAAACAACAATATGATAATTTAAAATTACAAGAACAAGCCGAAAATACTGCTAAATATGTTGAAGAAATTAACAAAGATTACACTCAAATTGTTAACGATTTTACAAGATTCTTACAAAAAAATTTACCAGGATTTTTTGAAA-GCATTCAAAACATCTACCAAAAAATCTGTGGACATTTACGTGAAGTTTATTATGTAAATCTAG-AAAAAATAATCGCTGAATTTATT-GGTGAATTTTTTGAAACATTAGAACATTTACAAAACCCATGGNAATAC]

[+] EMBL CA767526             [CAGAGGACGAGACAAGGGGGTCTTAAGAGAAAACAACCAAAAACAAACATGCGAATTATTATGGAAAATTAACTTAAAACAAAAACAAGCTAAATTGGTATTAAACAACAAAATTATATTGCAAATAGATTGGGAAAATAATTCCAATCAAAATACAACCATTCAAATTAAAATGCAAACTGATAATTTGAAAAAAAAGATGAGAATTATAACCGATTATCAAAACGGAAAAATTGAAATCACAAACTTTGAAAATGACAAGATACAATCAAATTACGTTGTTTCCGTTTTAAAAGAAAAGAACACTTTATTAGCAATCGAAATGCACAAGAAACAAGGTAGCAAAATGGAAAAGGTTGCATTTATCCAAATTGTGAAAGACAGTTTAAATTACGCTAAAGTACATTTGAAAATTGAAAAAAGTTTACTCTATGAATTTGAAAGTTCAATAGATCAAATCAAAAATACAGTAAAACCATTAGTTAAAAGACATGTTAGAGAATTTACATTAATTCCTAAACAACAATATGATAATTTAAAATTACAAGAACAAGCCGAAAATACTGCTAAATATGTTGAAGAAATTAACAAAGATTACACTCAAATTGTTAACGATTTTACAAGATTCTTACAAAAAAATTTACCAGGATTTTTTGAAA GCATTCAAAACATCTACCAAAAAATCTGTGGACATTTACGTGAAGTTTATTATGTAAATCTAG AAAAAATAATCGCTGAATTTATT GGTGAATTTTTTGAAACATTAGAACATTTACAAAACCCATGGNAATAC]
[+] EMBL CB097030             [                           AGAAAACAACCAAAAACAAACATGCGAATTATTATGGAAAATTAACTTAAAACAAAAACAAGCTAAATTGGTATTAAACAACAAAATTATATTGCAAATAGATTGGGAAAATAATTCCAATCAAAATACAACCATTCAAATTAAAATGCAAACTGATAATTTGAAAAAAAAGATGAGAATTATAACCGATTATCAAAACGGAAAAATTGAAATCACAAACTTTGAAAATGACAAGATACAATCAAATTACGTTGTTTCCGTTTTAAAAGAAAAGAACACTTTATTAGCAATCGAAATGCACAAGAAACAAGGTAGCAAAATGGAAAAGGTTGCATTTATCCAAATTGTGAAAGACAGTTTAAATTACGCTAAAGTACATTTGAAAATTGAAAAAAGTTTACTCTATGAATTTGAAAGTTCAATAGATCAAATCAAAAATACAGTAAAACCATTAGTTAAAAGACATGTTAGAGAATTTACATTAATTCCTAAACAACAATATGATAATTTAAAATTACAAGAACAAGCCGAAAATACTGCTAAATATGTTGAAGAAATTAACAAAGATTACACTCAAATTGTTAACGATTTTACAAGATTCTTACAAAAAAATTTACCAGGATTTTTTGAAAGGCATTCAAAACATCTACCAAAAAATCTGTGGACATTTACGTGAAGGTTATNATGTAAATCTAGNAAAAAATAATCGCTGAATTTATTGGGGGAATTTTTTGNAACATTAGAACATTTtcc                ]




>consensus_3405#0
CAGAGGACGAGACAAGGGGGTCTTAAGAGAAAACAACCAAAAACAAACATGCGAATTATT
ATGGAAAATTAACTTAAAACAAAAACAAGCTAAATTGGTATTAAACAACAAAATTATATT
GCAAATAGATTGGGAAAATAATTCCAATCAAAATACAACCATTCAAATTAAAATGCAAAC
TGATAATTTGAAAAAAAAGATGAGAATTATAACCGATTATCAAAACGGAAAAATTGAAAT
CACAAACTTTGAAAATGACAAGATACAATCAAATTACGTTGTTTCCGTTTTAAAAGAAAA
GAACACTTTATTAGCAATCGAAATGCACAAGAAACAAGGTAGCAAAATGGAAAAGGTTGC
ATTTATCCAAATTGTGAAAGACAGTTTAAATTACGCTAAAGTACATTTGAAAATTGAAAA
AAGTTTACTCTATGAATTTGAAAGTTCAATAGATCAAATCAAAAATACAGTAAAACCATT
AGTTAAAAGACATGTTAGAGAATTTACATTAATTCCTAAACAACAATATGATAATTTAAA
ATTACAAGAACAAGCCGAAAATACTGCTAAATATGTTGAAGAAATTAACAAAGATTACAC
TCAAATTGTTAACGATTTTACAAGATTCTTACAAAAAAATTTACCAGGATTTTTTGAAAG
CATTCAAAACATCTACCAAAAAATCTGTGGACATTTACGTGAAGTTTATTATGTAAATCT
AGAAAAAATAATCGCTGAATTTATTGGTGAATTTTTTGAAACATTAGAACATTTACAAAA
CCCATGGNAATAC

clustalw multiple alignements is not computed in this case