cluster # 3420

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Oryza sativa
cluster # 3420 cluster # 3420 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3420#0 length = 2118 sequences # 2
consensusID : consensus_3420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2118
fasta sequence
                              [AGATCGCTCCCCCCCTAATTCCCGCCTTGCCCCCTCCTCCCCATGTCGCCGCCGGTGGCCGGCGCCGCCTCCTCCGGCGACGGGCCGCCGGGGCGCCCGCCGCGCGAGCTCTACACCATCCCTGCCTCCTCGGGTTGGTTCCAGTGGGATGAGATCCACGAGACGGAGCGGCGGGCGCTGCCGGAGTTCTTCGGCGGCGCCGGGGGGAGCGGGTTCGGGACGGCGTCGCGGAACCCGCGGATCTACAGGGAGTACCGCGACTACATCATCAGCAGGTACCGCGAGGACACCTCCCGCCGCCTCACCTTCACCGAGGTCCGCAAGGCGCTCGTCGGCGACGTCACGCTCCTCCGGAAGCTCTTCGCCTTCCTCGACTCCTCGGGCCTCATCAACTTCTCCGCCTCCCCCTCCCGCCCCGAGGCGCAGCAGCAGCAGCGGCAGACGGAGGCGGAGGCCGTCGTGGAGGCGCCCGTGGGGCTGCAGGTGACGCCACGGCCGCCGCCGTCGTACTTCGCGGAGGAGAAGGGAGGAGGGGGCAACGAGAACGGATTCCGTTTGCCGCCGCTGACCTCGTATAGTGATGTATTTGGAGAGTGGGCGCCTGGGATGGCGCCTATATGTGGGCTCTGTGGCATGGAGTGCAGAGACGGGAATGCCCAAATATTGAAGGATGGTTTTAAAGTATGCTCAAAATGTTATGCCAATAATGATAATAAGGGTGAAGCAAATATACATCCAGGTGACAAAAAGGAGCGGATCGACAATCATTCTTCTAGTGCATGGACAGATGCAGAAACTCTCCTTCTCTTGGAAGGTGTACTAAAACATGGAGATGACTGGGATCTCATCGCCCAGCATGTCCGCACAAAGAATAAATCAGAATGCATTGCAAGGCTAATTCAGTTGCCTTTTGGTGAACATATGCTGGGCACAGTAAATGGTAAATTGGATAACAGACTCCATAAAATCCAAACAACCGATGGAAAAGTGAACAAGTCCACTGTGAAGGAGTCTTCAAGTCAACCAACTGAAACAGTTGATGACATGCAGATTGATGGAAATGAAGATGGCGCTGATAAATCTGTTGAAGAACATCCTACAAAACATAGACGGTTGTTTTCTTCAATAGATATCACTGTCTCATTAATGGAGCAGTTAGCGCATCTTACCACATCGACAAGCCCAGATGTTGTTGCTGCAGCTGCTGATGCCGCAATTAAAGCACTGGGTAATGAAAACCCCCAAGCAAGGAGAGCTTTTCAACTCAGTGAGAAAGAGTACCAAACCAGGGCATTCTCTTCTAACCATGCCCGGCAGAGTGATGATGTTGGTGGTGGTGATCGGGATGTAGAAATGCACGGGCACCCAGATAAAAAGCAGGGGAAGATGTTTATTTCTACCACATATCAAGTAAGGGCAGCTGTTGCTACGTCCATAGGTGTAGCTGCTGCCCGTGCTAAAATGCTTGCAGACCAGGAAGAACGGGAAATGGAGCTCCTAATGGCGTCCATAATAGAAACTCAGCTAAAAAAGATCCAATACAAGATCAAACACTTTGAGGAGCTAGAGTTGATCATGGATCAGGAATACGCTACTCTACAGCAAATGAAGTCTTCCCTTGTCGATGAATGGCAAAAGGTCCTCAAGCGAGCATTTGAGACTGGAGTACCAATATCGAGGGATGAAGTGCTTATAAAGTTGTTCCAAAACAAGCCAAATCTGTAGAGAAATTGACCAAAGTCGGTTAGATCTCCATGAGGGAGCATTGGAGGTTGGGATATCTGTACTGAGGGATGTGCTGTTCGAGTAACATCCCTATTCCTTAGAGAAGTTGACTGGAGTCGATTATCCCTCCTCTGATCTGCCTCTCCATAGAGCAGTCATCTAGCAGTTTAACATTGTGGTGTCAGAGCGTGGCTGTAAATGTGCTGATTGAGCTTTGGGTTGATCTCAAAATTTTGCGTTTGAGATCACATCGATCCTCTGTAGTTTGTATCATCCTATGCGATTGCACGTGATTGCTCCGTTATACTATCCAACTAGGTTAGACAAGTAGTGTTGCTAATAGCTTCCTGTACCTGTCTACATTTCGTTGATTTCATTTGTTGGGATGTGCAA]

[+] EMBL AK102453             [AGATCGCTCCCCCCCTAATTCCCGCCTTGCCCCCTCCTCCCCATGTCGCCGCCGGTGGCCGGCGCCGCCTCCTCCGGCGACGGGCCGCCGGGGCGCCCGCCGCGCGAGCTCTACACCATCCCTGCCTCCTCGGGTTGGTTCCAGTGGGATGAGATCCACGAGACGGAGCGGCGGGCGCTGCCGGAGTTCTTCGGCGGCGCCGGGGGGAGCGGGTTCGGGACGGCGTCGCGGAACCCGCGGATCTACAGGGAGTACCGCGACTACATCATCAGCAGGTACCGCGAGGACACCTCCCGCCGCCTCACCTTCACCGAGGTCCGCAAGGCGCTCGTCGGCGACGTCACGCTCCTCCGGAAGCTCTTCGCCTTCCTCGACTCCTCGGGCCTCATCAACTTCTCCGCCTCCCCCTCCCGCCCCGAGGCGCAGCAGCAGCAGCGGCAGACGGAGGCGGAGGCCGTCGTGGAGGCGCCCGTGGGGCTGCAGGTGACGCCACGGCCGCCGCCGTCGTACTTCGCGGAGGAGAAGGGAGGAGGGGGCAACGAGAACGGATTCCGTTTGCCGCCGCTGACCTCGTATAGTGATGTATTTGGAGAGTGGGCGCCTGGGATGGCGCCTATATGTGGGCTCTGTGGCATGGAGTGCAGAGACGGGAATGCCCAAATATTGAAGGATGGTTTTAAAGTATGCTCAAAATGTTATGCCAATAATGATAATAAGGGTGAAGCAAATATACATCCAGGTGACAAAAAGGAGCGGATCGACAATCATTCTTCTAGTGCATGGACAGATGCAGAAACTCTCCTTCTCTTGGAAGGTGTACTAAAACATGGAGATGACTGGGATCTCATCGCCCAGCATGTCCGCACAAAGAATAAATCAGAATGCATTGCAAGGCTAATTCAGTTGCCTTTTGGTGAACATATGCTGGGCACAGTAAATGGTAAATTGGATAACAGACTCCATAAAATCCAAACAACCGATGGAAAAGTGAACAAGTCCACTGTGAAGGAGTCTTCAAGTCAACCAACTGAAACAGTTGATGACATGCAGATTGATGGAAATGAAGATGGCGCTGATAAATCTGTTGAAGAACATCCTACAAAACATAGACGGTTGTTTTCTTCAATAGATATCACTGTCTCATTAATGGAGCAGTTAGCGCATCTTACCACATCGACAAGCCCAGATGTTGTTGCTGCAGCTGCTGATGCCGCAATTAAAGCACTGGGTAATGAAAACCCCCAAGCAAGGAGAGCTTTTCAACTCAGTGAGAAAGAGTACCAAACCAGGGCATTCTCTTCTAACCATGCCCGGCAGAGTGATGATGTTGGTGGTGGTGATCGGGATGTAGAAATGCACGGGCACCCAGATAAAAAGCAGGGGAAGATGTTTATTTCTACCACATATCAAGTAAGGGCAGCTGTTGCTACGTCCATAGGTGTAGCTGCTGCCCGTGCTAAAATGCTTGCAGACCAGGAAGAACGGGAAATGGAGCTCCTAATGGCGTCCATAATAGAAACTCAGCTAAAAAAGATCCAATACAAGATCAAACACTTTGAGGAGCTAGAGTTGATCATGGATCAGGAATACGCTACTCTACAGCAAATGAAGTCTTCCCTTGTCGATGAATGGCAAAAGGTCCTCAAGCGAGCATTTGAGACTGGAGTACCAATATCGAGGGATGAAGTGCTTATAAAGTTGTTCCAAAACAAGCCAAATCTGTAGAGAAATTGACCAAAGTCGGTTAGATCTCCATGAGGGAGCATTGGAGGTTGGGATATCTGTACTGAGGGATGTGCTGTTCGAGTAACATCCCTATTCCTTAGAGAAGTTGACTGGAGTCGATTATCCCTCCTCTGATCTGCCTCTCCATAGAGCAGTCATCTAGCAGTTTAACATTGTGGTGTCAGAGCGTGGCTGTAAATGTGCTGATTGAGCTTTGGGTTGATCTCAAAATTTTGCGTTTGAGATCACATCGATCCTCTGTAGTTTGTATCATCCTATGCGATTGCACGTGATTGCTCCGTTATACTATCCAACTAGGTTAGACAAGTAGTGTTGCTAATAGCTTCCTGTACCTGTCTACATTTCGTTGATTTCATTTGTTGGGATGTGCAA]
[+] EMBL CA882908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGAGATGACTGGGATCTCATCGCCCAGCATGTCCGCACAAAGAATAAATCAGAATGCATTGCAAGGCTAATTCAGTTGCCTTTTGGTGAACATATGCTGGGCACAGTAAATGGTAAATTGGATAACAGACTCCATAAAATCCAAACAACCGATGGAAAAGTGAACAAGTCCACTGTGAAGGAGTCTTCAAGTCAACCAACTGAAACAGTTGATGACATGCAGATTGATGGAAATGAAGATGGCGCTGATAAATCTGTTGAAGAACATCCTACAAAACATAGACGGTTGTTTTCTTCAATAGATATCACTGTCTCATTAATGGAGCAGTTAGCGCATCTTACCACATCGACAAGCCCAGATGTTGTTGCTGCAGCTGCTGATGCCGCAATTAAAGCACTGGGTAATGAAAACCCCCAAGCAAGGAGAGCTTTTCAACTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_3420#0
AGATCGCTCCCCCCCTAATTCCCGCCTTGCCCCCTCCTCCCCATGTCGCCGCCGGTGGCC
GGCGCCGCCTCCTCCGGCGACGGGCCGCCGGGGCGCCCGCCGCGCGAGCTCTACACCATC
CCTGCCTCCTCGGGTTGGTTCCAGTGGGATGAGATCCACGAGACGGAGCGGCGGGCGCTG
CCGGAGTTCTTCGGCGGCGCCGGGGGGAGCGGGTTCGGGACGGCGTCGCGGAACCCGCGG
ATCTACAGGGAGTACCGCGACTACATCATCAGCAGGTACCGCGAGGACACCTCCCGCCGC
CTCACCTTCACCGAGGTCCGCAAGGCGCTCGTCGGCGACGTCACGCTCCTCCGGAAGCTC
TTCGCCTTCCTCGACTCCTCGGGCCTCATCAACTTCTCCGCCTCCCCCTCCCGCCCCGAG
GCGCAGCAGCAGCAGCGGCAGACGGAGGCGGAGGCCGTCGTGGAGGCGCCCGTGGGGCTG
CAGGTGACGCCACGGCCGCCGCCGTCGTACTTCGCGGAGGAGAAGGGAGGAGGGGGCAAC
GAGAACGGATTCCGTTTGCCGCCGCTGACCTCGTATAGTGATGTATTTGGAGAGTGGGCG
CCTGGGATGGCGCCTATATGTGGGCTCTGTGGCATGGAGTGCAGAGACGGGAATGCCCAA
ATATTGAAGGATGGTTTTAAAGTATGCTCAAAATGTTATGCCAATAATGATAATAAGGGT
GAAGCAAATATACATCCAGGTGACAAAAAGGAGCGGATCGACAATCATTCTTCTAGTGCA
TGGACAGATGCAGAAACTCTCCTTCTCTTGGAAGGTGTACTAAAACATGGAGATGACTGG
GATCTCATCGCCCAGCATGTCCGCACAAAGAATAAATCAGAATGCATTGCAAGGCTAATT
CAGTTGCCTTTTGGTGAACATATGCTGGGCACAGTAAATGGTAAATTGGATAACAGACTC
CATAAAATCCAAACAACCGATGGAAAAGTGAACAAGTCCACTGTGAAGGAGTCTTCAAGT
CAACCAACTGAAACAGTTGATGACATGCAGATTGATGGAAATGAAGATGGCGCTGATAAA
TCTGTTGAAGAACATCCTACAAAACATAGACGGTTGTTTTCTTCAATAGATATCACTGTC
TCATTAATGGAGCAGTTAGCGCATCTTACCACATCGACAAGCCCAGATGTTGTTGCTGCA
GCTGCTGATGCCGCAATTAAAGCACTGGGTAATGAAAACCCCCAAGCAAGGAGAGCTTTT
CAACTCAGTGAGAAAGAGTACCAAACCAGGGCATTCTCTTCTAACCATGCCCGGCAGAGT
GATGATGTTGGTGGTGGTGATCGGGATGTAGAAATGCACGGGCACCCAGATAAAAAGCAG
GGGAAGATGTTTATTTCTACCACATATCAAGTAAGGGCAGCTGTTGCTACGTCCATAGGT
GTAGCTGCTGCCCGTGCTAAAATGCTTGCAGACCAGGAAGAACGGGAAATGGAGCTCCTA
ATGGCGTCCATAATAGAAACTCAGCTAAAAAAGATCCAATACAAGATCAAACACTTTGAG
GAGCTAGAGTTGATCATGGATCAGGAATACGCTACTCTACAGCAAATGAAGTCTTCCCTT
GTCGATGAATGGCAAAAGGTCCTCAAGCGAGCATTTGAGACTGGAGTACCAATATCGAGG
GATGAAGTGCTTATAAAGTTGTTCCAAAACAAGCCAAATCTGTAGAGAAATTGACCAAAG
TCGGTTAGATCTCCATGAGGGAGCATTGGAGGTTGGGATATCTGTACTGAGGGATGTGCT
GTTCGAGTAACATCCCTATTCCTTAGAGAAGTTGACTGGAGTCGATTATCCCTCCTCTGA
TCTGCCTCTCCATAGAGCAGTCATCTAGCAGTTTAACATTGTGGTGTCAGAGCGTGGCTG
TAAATGTGCTGATTGAGCTTTGGGTTGATCTCAAAATTTTGCGTTTGAGATCACATCGAT
CCTCTGTAGTTTGTATCATCCTATGCGATTGCACGTGATTGCTCCGTTATACTATCCAAC
TAGGTTAGACAAGTAGTGTTGCTAATAGCTTCCTGTACCTGTCTACATTTCGTTGATTTC
ATTTGTTGGGATGTGCAA
clustalw multiple alignements is not computed in this case