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Oryza sativa
cluster # 3426 cluster # 3426       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3426#0 length = 1474 sequences # 2  

consensusID : consensus_3426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1474
fasta sequence
                              [GAGAAGATGGACGCCGCCCGCGCCTCCCTCCTCTTGGCCGGCGGCCTCGCCGTATCCACCTCCACCTCCGCCGTCGCCACTGCCGCCCAAACCGTCTCGATTCCTCACCTATCGCCGCACACCCGCCGAAGGCGACAGCGCCGCTTCCTCCGCCTGGCCTCCGCTGCGGCGTCGTCTCCCCCGCCGCTCCCCGCTGCTTCGGCGCAGCCGCATTGCTCTAGGTGGGTCGTGGTGATGGAGAGACCCCCCGCGCCAGCGGGAGGCGGCGAGGTGTCCCGTGCGGAGGCCGTCGACCACTACGTCGCCACACTGGCCAGGGTATTGGGGAGCCAGGAGGAAGCACAGATGCGCATATACGATGCTTCGTGGGATGGGAGCTACGAGTTCAGCTGCGAGATCGACGATGAAGCGTCAAGGAACCTTGCGAAAATGCCCGGGGTATTAGCTGTTAAGCCAGATACGGATAAGGTTGATATGTCAGAGAAGGATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGATGCTGTTTCCAATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGAGAAGCCTGGGGTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCTCATGAAAGTGTTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGAGAGGGATTATGGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGTTTCTGGAGTGTTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAAAGGTGATGACAGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGACTTTTTGTTACAGGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCCTTTTGGTGAACTAGTTGAAGTGAAGATAATAATGGACAAGATATCAAAAAGATCAAAAGGGTATGCTTTCATAGAATACACCACAGAAGAAGCTGGAGGTGCTGCTCTGAAAGCAATGAACGGACAGATAATAAATGGCTGGATGATAGTTGTCGATGTTGCTAAACATAGATCGAGGGACCGTCAACCCCCGTATAGTGCATCAGGTAGATCCAATCAAGTGCTTCGATCGCGTTATCATACTGGATGAACAAAGCATGACACCTAGAGATTAGACACAAGATTAGCAGTGAGTACGAAGTAGAAACCATAGTTTTCCGGTGGTGTTGTATTTTTGCGTGGCCTGCTATTCTAATGTTTCCAAGAGATGATAGCGGGCTACAGATTCCATAAGTTTAGTAATATCTAACATGTACTGGATTGATGCAATATCTTTTGATACTGCATTGGTAATATGAGCTTGAATAGATAATCTCATGTAACATATTTCTATCAACAAATAATGTGAAAAAAAGAGA]

[+] EMBL AK066980             [GAGAAGATGGACGCCGCCCGCGCCTCCCTCCTCTTGGCCGGCGGCCTCGCCGTATCCACCTCCACCTCCGCCGTCGCCACTGCCGCCCAAACCGTCTCGATTCCTCACCTATCGCCGCACACCCGCCGAAGGCGACAGCGCCGCTTCCTCCGCCTGGCCTCCGCTGCGGCGTCGTCTCCCCCGCCGCTCCCCGCTGCTTCGGCGCAGCCGCATTGCTCTAGGTGGGTCGTGGTGATGGAGAGACCCCCCGCGCCAGCGGGAGGCGGCGAGGTGTCCCGTGCGGAGGCCGTCGACCACTACGTCGCCACACTGGCCAGGGTATTGGGGAGCCAGGAGGAAGCACAGATGCGCATATACGATGCTTCGTGGGATGGGAGCTACGAGTTCAGCTGCGAGATCGACGATGAAGCGTCAAGGAACCTTGCGAAAATGCCCGGGGTATTAGCTGTTAAGCCAGATACGGATAAGGTTGATATGTCAGAGAAGGATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGATGCTGTTTCCAATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGAGAAGCCTGGGGTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCTCATGAAAGTGTTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGAGAGGGATTATGGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGTTTCTGGAGTGTTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAAAGGTGATGACAGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGACTTTTTGTTACAGGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCCTTTTGGTGAACTAGTTGAAGTGAAGATAATAATGGACAAGATATCAAAAAGATCAAAAGGGTATGCTTTCATAGAATACACCACAGAAGAAGCTGGAGGTGCTGCTCTGAAAGCAATGAACGGACAGATAATAAATGGCTGGATGATAGTTGTCGATGTTGCTAAACATAGATCGAGGGACCGTCAACCCCCGTATAGTGCATCAGGTAGATCCAATCAAGTGCTTCGATCGCGTTATCATACTGGATGAACAAAGCATGACACCTAGAGATTAGACACAAGATTAGCAGTGAGTACGAAGTAGAAACCATAGTTTTCCGGTGGTGTTGTATTTTTGCGTGGCCTGCTATTCTAATGTTTCCAAGAGATGATAGCGGGCTACAGATTCCATAAGTTTAGTAATATCTAACATGTACTGGATTGATGCAATATCTTTTGATACTGCATTGGTAATATGAGCTTGAATAGATAATCTCATGTAACATATTTCTATCAACAAATAATGTGAAAAAAAGAGA]
[+] EMBL CA997988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAGAGAAGGATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGATGCTGTTTCCAATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGAGAAGCCTGGGGTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCTCATGAAAGTGTTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGAGAGGGATTATGGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGTTTCTGGAGTGTTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAAAGGTGATGACAGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGGCTTTTTGTTACAGGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCCTTTTTGTGAACTAGTTGAAGTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_3426#0 GAGAAGATGGACGCCGCCCGCGCCTCCCTCCTCTTGGCCGGCGGCCTCGCCGTATCCACC TCCACCTCCGCCGTCGCCACTGCCGCCCAAACCGTCTCGATTCCTCACCTATCGCCGCAC ACCCGCCGAAGGCGACAGCGCCGCTTCCTCCGCCTGGCCTCCGCTGCGGCGTCGTCTCCC CCGCCGCTCCCCGCTGCTTCGGCGCAGCCGCATTGCTCTAGGTGGGTCGTGGTGATGGAG AGACCCCCCGCGCCAGCGGGAGGCGGCGAGGTGTCCCGTGCGGAGGCCGTCGACCACTAC GTCGCCACACTGGCCAGGGTATTGGGGAGCCAGGAGGAAGCACAGATGCGCATATACGAT GCTTCGTGGGATGGGAGCTACGAGTTCAGCTGCGAGATCGACGATGAAGCGTCAAGGAAC CTTGCGAAAATGCCCGGGGTATTAGCTGTTAAGCCAGATACGGATAAGGTTGATATGTCA GAGAAGGATAATCATGGCTCAGGCCTCTCAGCAGCTAACCTAGGAAATTTCAGTGATGCT GTTTCCAATCACTCTTCTTCTAGTGGGGAAAATGAGTTTTGGCTTGTGCGAATGGAGAAG CCTGGGGTTGAAGTTGTGACAAAGGCACAAATGGTGGATCATTATACCCAAACCCTCATG AAAGTGTTGGGGAATGAAAAGGATGCACAAGTCAGCATATATCACATTTCATGGGAGAGG GATTATGGCTTCTGCTGTCACATTGACGAAGAATGTGCCAAGGAGCTAGCTGATGTTTCT GGAGTGTTATCTGTTCAACCGGACACAAATTTTGGATCCGACAACAAAAATTACAAAGGT GATGACAGCTTCAAATCGTCTGAAGCTACTCAGGCTGAAGTCAAAACTAAAAGACTTTTT GTTACAGGTCTTTCATTTTATACATCTGAGAAAACTTTGCGGGCTGCCTTTGAGCCTTTT GGTGAACTAGTTGAAGTGAAGATAATAATGGACAAGATATCAAAAAGATCAAAAGGGTAT GCTTTCATAGAATACACCACAGAAGAAGCTGGAGGTGCTGCTCTGAAAGCAATGAACGGA CAGATAATAAATGGCTGGATGATAGTTGTCGATGTTGCTAAACATAGATCGAGGGACCGT CAACCCCCGTATAGTGCATCAGGTAGATCCAATCAAGTGCTTCGATCGCGTTATCATACT GGATGAACAAAGCATGACACCTAGAGATTAGACACAAGATTAGCAGTGAGTACGAAGTAG AAACCATAGTTTTCCGGTGGTGTTGTATTTTTGCGTGGCCTGCTATTCTAATGTTTCCAA GAGATGATAGCGGGCTACAGATTCCATAAGTTTAGTAATATCTAACATGTACTGGATTGA TGCAATATCTTTTGATACTGCATTGGTAATATGAGCTTGAATAGATAATCTCATGTAACA TATTTCTATCAACAAATAATGTGAAAAAAAGAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)