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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3472 cluster # 3472       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3472#0 length = 830 sequences # 2  

consensusID : consensus_3472#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 830
fasta sequence
                              [ACTCGCCTGGTTGCCCTGTTGGACCTCAGGTCTTCGACAGGCTTGAGAGGAAGTACAATAAGATATCTGCATGGCCAAGACCAGAAAGGAGGCTTCTGTTTGATCTTGCAAATACTGTTCTTTCTGAGATCCTTGCACCATGGAAATCCAGTAGACGGTGTTGTCCTGTTTGGGGCCCTGAAGGGCCTGTTGAGGTGGTTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAGGACATCCTGATGACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATACGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGGAGTTCCTCTCAGGATGTGTTGCTTCATGAGGAAAATTAGTTTCTACTTCGTGCTACACCAATACTAACAGTACTCGAGTTCAATGGCATTACTGCAAAGCCAGAGTTTTGCCTGAAGAAACTTGAACCACATTGTTCGGTGCCAGTAACAGCGTTTCAAAGTGCACATATGTTGCCCTTTTCTGGTCCATATGATAGAGGCTCTGTTTGACATTTCATTACACCTTGGGGCCTTAATATACAGGGTCTGAAGGGACAAAAGATGTATGCACATACCTTGACGTGTGTAGAAATGTGATCTTTTAGGATATCTTTGCTTGTTATCGGGGTTTCAAACTGTTCAAAAATCTTAAGGCAAATGTGTAGCACATTTTAGAGTAAACTAACATCTGAAGTCTTGTAATTTGTTCAGTATGTAATCTGCAATCGCAAAATATTTAAACAGGAGAATAGGTGAAGAACTGACGTGTT]

[+] EMBL AK058301             [ACTCGCCTGGTTGCCCTGTTGGACCTCAGGTCTTCGACAGGCTTGAGAGGAAGTACAATAAGATATCTGCATGGCCAAGACCAGAAAGGAGGCTTCTGTTTGATCTTGCAAATACTGTTCTTTCTGAGATCCTTGCACCATGGAAATCCAGTAGACGGTGTTGTCCTGTTTGGGGCCCTGAAGGGCCTGTTGAGGTGGTTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAGGACATCCTGATGACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATACGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGGAGTTCCTCTCAGGATGTGTTGCTTCATGAGGAAAATTAGTTTCTACTTCGTGCTACACCAATACTAACAGTACTCGAGTTCAATGGCATTACTGCAAAGCCAGAGTTTTGCCTGAAGAAACTTGAACCACATTGTTCGGTGCCAGTAACAGCGTTTCAAAGTGCACATATGTTGCCCTTTTCTGGTCCATATGATAGAGGCTCTGTTTGACATTTCATTACACCTTGGGGCCTTAATATACAGGGTCTGAAGGGACAAAAGATGTATGCACATACCTTGACGTGTGTAGAAATGTGATCTTTTAGGATATCTTTGCTTGTTATCGGGGTTTCAAACTGTTCAAAAATCTTAAGGCAAATGTGTAGCACATTTTAGAGTAAACTAACATCTGAAGTCTTGTAATTTGTTCAGTATGTAATCTGCAATCGCAAAATATTTAAACAGGAGAATAGGTGAAGAACTGACGTGTT]
[+] EMBL CB000677             [                                                                                                                                                                                                      TTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAGGACATCCTGATGACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATACGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGGAGTTCCTCTCAGGATGTGTTGCTTCATGAGGAAAATTAGTTTCTACTTCGTGCTACATCAATACTAACAGTACTCGAGTTCAATGGCATTACTGCAAAGCCAGAGTTTTGCCTGAAGAAACTTGAACCACATTGTTCGGTGCCAGTAACAGCGTTTCAAAGTGCACATATGT                                                                                                                                                                                                                                                                                                          ]


>consensus_3472#0 ACTCGCCTGGTTGCCCTGTTGGACCTCAGGTCTTCGACAGGCTTGAGAGGAAGTACAATA AGATATCTGCATGGCCAAGACCAGAAAGGAGGCTTCTGTTTGATCTTGCAAATACTGTTC TTTCTGAGATCCTTGCACCATGGAAATCCAGTAGACGGTGTTGTCCTGTTTGGGGCCCTG AAGGGCCTGTTGAGGTGGTTTGGCAAACAATGGTCAGGCGGCAGGAAGAGCTTGCAGTAG GACATCCTGATGACAAAGTTCTTGATCCAGAATGGCTGGAAGTTGGTGAGGACATCAATA CGGTGGGAAAGCAGATAGCCAAGATGTTACATGGTGATCTCTTGGATGAAATTATATTGG AGTTCCTCTCAGGATGTGTTGCTTCATGAGGAAAATTAGTTTCTACTTCGTGCTACACCA ATACTAACAGTACTCGAGTTCAATGGCATTACTGCAAAGCCAGAGTTTTGCCTGAAGAAA CTTGAACCACATTGTTCGGTGCCAGTAACAGCGTTTCAAAGTGCACATATGTTGCCCTTT TCTGGTCCATATGATAGAGGCTCTGTTTGACATTTCATTACACCTTGGGGCCTTAATATA CAGGGTCTGAAGGGACAAAAGATGTATGCACATACCTTGACGTGTGTAGAAATGTGATCT TTTAGGATATCTTTGCTTGTTATCGGGGTTTCAAACTGTTCAAAAATCTTAAGGCAAATG TGTAGCACATTTTAGAGTAAACTAACATCTGAAGTCTTGTAATTTGTTCAGTATGTAATC TGCAATCGCAAAATATTTAAACAGGAGAATAGGTGAAGAACTGACGTGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)