Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3484 cluster # 3484       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3484#0 length = 815 sequences # 2  

consensusID : consensus_3484#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 815
fasta sequence
                              [TCAGTGGCAAATCGTAGACGTGCGACAAAGTCAGTGGCATATAATGGATTATCTCTTAAAAAAATCAAAACGGAGAGGCCCACTTGCCATCCCCATATGCTTTTTCCTTTATTTTTCCTGCTCTAATTTTTCCCCTTTCCTCCTCGGCCGTTGCCGTTGCCGTTGCTCCCCACCATCTTTCTCTCTCTCTCTCTCTCTCTCCTCCTGCCAGTAGCCGCTGCCGCCGCCGGCGAGCGATTCCGCGGTGATGTTCGCCTGGCTCCTCCGCGGCTGCCGCGACGAGTGCTCCGCCTCCGACCAGCTCAAGCAGGCCCGTGATGTCTTCGTGGCAAAAGAGGCAGTTCTGCAAAAGAAGATCTCTCAGGAGATGGAACGTGCCAAGGAGTTCACAAAATCAGGAAATAAGCAAGCAGCAATGCAGTGCTTGAAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAGTGTCCAGTTGCGCATTAATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGAAGACAAGTGAAATCAGAGTTCTGAATGTATGCCTCTTTCTGTTACTTATATTTGCTTGGATCAGATACATAATCTTGTGTGGTTAGCATAGTGTAGCATAGTTTCTTTTACCAACAATGCAAATTGAATTTAACATTGATGTGCCCTTCCATAATTTATGAAAGTGGCTGCTTTAGATCTTTGTTCTTTCACTCTTTATTGGAGAAAAGTGAATCTCATAAACTGCAGTGTTTATGATTTATGTGAACCATGAGCATAAAATTTCATANACCANANTGCNNAAA]

[+] EMBL AK108737             [TCAGTGGCAAATCGTAGACGTGCGACAAAGTCAGTGGCATATAATGGATTATCTCTTAAAAAAATCAAAACGGAGAGGCCCACTTGCCATCCCCATATGCTTTTTCCTTTATTTTTCCTGCTCTAATTTTTCCCCTTTCCTCCTCGGCCGTTGCCGTTGCCGTTGCTCCCCACCATCTTTCTCTCTCTCTCTCTCTCTCTCCTCCTGCCAGTAGCCGCTGCCGCCGCCGGCGAGCGATTCCGCGGTGATGTTCGCCTGGCTCCTCCGCGGCTGCCGCGACGAGTGCTCCGCCTCCGACCAGCTCAAGCAGGCCCGTGATGTCTTCGTGGCAAAAGAGGCAGTTCTGCAAAAGAAGATCTCTCAGGAGATGGAACGTGCCAAGGAGTTCACAAAATCAGGAAATAAGCAAGCAGCAATGCAGTGCTTGAAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAGTGTCCAGTTGCGCATTAATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGAAGACAAGTGAAATCAGAGTTCTGAATGTATGCCTCTTTCTGTTACTTATATTTGCTTGGATCAGATACATAATCTTGTGTGGTTAGCATAGTGTAGCATAGTTTCTTTTACCAACAATGCAAATTGAATTTAACATTGATGTGCCCTTCCATAATTTATGAAAGTGGCTGCTTTAGATCTTTGTTCTTTCACTCTTTATTGGAGAAAAGTGAATCTCATAAACTGCAGTGTTTATGATTTATGTGAACCATGAGCATAAAATTTCAT                 ]
[+] EMBL CB096508             [                                                                                                                                                                                                                                                                                                                                                                                                         atacGGAAATAAGCAAGCAGCAATGTAGTGCTTGAAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAGTGTCCAGTTGCGCATTAATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGAAGACAAGTGAAATCAGAGTTCTGAATGTATGCCTCTTTCTGTTACTTATATTTGCTTGGATCAGATACATAATCTTGTGTGGTTAGCATAGTGTAGCATAGTTTCTTTTACCAACAATGCAAATTGAATTTAACATTGATGTGCCCTTCCATAATTTATGAAAGTGGCTGCTTTAGATCTTTGTTCTTTCACTCTTTATTGGAGAAAAGTGAATCTCATAAACTGCAGNGTTTATGACTTATGNGAACCATGAGCATAAAATTTCAAANACCANANTGCNNAAA]


>consensus_3484#0 TCAGTGGCAAATCGTAGACGTGCGACAAAGTCAGTGGCATATAATGGATTATCTCTTAAA AAAATCAAAACGGAGAGGCCCACTTGCCATCCCCATATGCTTTTTCCTTTATTTTTCCTG CTCTAATTTTTCCCCTTTCCTCCTCGGCCGTTGCCGTTGCCGTTGCTCCCCACCATCTTT CTCTCTCTCTCTCTCTCTCTCCTCCTGCCAGTAGCCGCTGCCGCCGCCGGCGAGCGATTC CGCGGTGATGTTCGCCTGGCTCCTCCGCGGCTGCCGCGACGAGTGCTCCGCCTCCGACCA GCTCAAGCAGGCCCGTGATGTCTTCGTGGCAAAAGAGGCAGTTCTGCAAAAGAAGATCTC TCAGGAGATGGAACGTGCCAAGGAGTTCACAAAATCAGGAAATAAGCAAGCAGCAATGCA GTGCTTGAAGAGGAAGAAATACTATGAAAGCCAAATGAATCAGGTTGGAAGTGTCCAGTT GCGCATTAATACCAAGGAGAAGATGATTGCTGATCATAGCGGGAATAAAGAAGACAAGTG AAATCAGAGTTCTGAATGTATGCCTCTTTCTGTTACTTATATTTGCTTGGATCAGATACA TAATCTTGTGTGGTTAGCATAGTGTAGCATAGTTTCTTTTACCAACAATGCAAATTGAAT TTAACATTGATGTGCCCTTCCATAATTTATGAAAGTGGCTGCTTTAGATCTTTGTTCTTT CACTCTTTATTGGAGAAAAGTGAATCTCATAAACTGCAGTGTTTATGATTTATGTGAACC ATGAGCATAAAATTTCATANACCANANTGCNNAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)