cluster # 3515

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Oryza sativa
cluster # 3515 cluster # 3515 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3515#0 length = 679 sequences # 2

consensusID : consensus_3515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 679
fasta sequence

                              [TTTTTTTTTTTTTGCAAACAATAAAAGCAAATGGACTAGTGTAGAACGATAACTATTACTGACATCTTTTCATATATTTTTTTCAAACAAGAAA-TGCAAA-TGGAGGTGGCTAAAAGTACCCAAATAAAACAGGAACGGACAACAATCTA-TGGCTTGACATACAACAAA-TGCATACAAAGTACAATCTTATGTCTCCAGGGAGTGCAACCACCAAAAAGAGTCGGCCAATAGATTATCTCCTTTATGAGATAATCTACTGCTGGTAGCGGAAATAAATTGTTGGTCATTTGAATTATAAAATATAGGTTTATCTCCAACCACACGTCATATCTGCATGTGGTATAAAGAAGTCATCCAGTACAGCACCATATTTTCATCTTGGTAAAGGTTTTTACAAGCATCCTATAAAATAAAATATAGCACAGAAACACAGATGTT-GAT-TCAAATTTAAAAACCA-TGCAGAGCCCAACTTCAATGTAAAGATATTGCACAGACACTTTAAAGCGGCCCAGTTTTACCACCATCAAACGATTTATGAGAACTATAATGCTGCACACACAAATGAGCAAAAATGAATTGATGTCAGGACTACCCTGAATCACTTGAGTTCGGCCAAACATTTGAAATTAATCCCAAAGAAATGGGCGTAAACATTATTGCAGAACATTATGCTGCTACA]

[+] EMBL CA761576             [TTTTTTTTTTTTTGCAAACAATAAAAGCAAATGGACTAGTGTAGAACGATAACTATTACTGACATCTTTTCATATATTTTTTTCAAACAAGAAA TGCAAA TGGAGGTGGCTAAAAGTACCCAAATAAAACAGGAACGGACAACAATCTA TGGCTTGACATACAACAAA TGCATACAAAGTACAATCTTATGTCTCCAGGGAGTGCAACCACCAAAAAGAGTCGGCCAATAGATTATCTCCTTTATGAGATAATCTACTGCTGGTAGCGGAAATAAATTGTTGGTCATTTGAATTATAAAATATAGGTTTATCTCCAACCACACGTCATATCTGCATGTGGTATAAAGAAGTCATCCAGTACAGCACCATATTTTCATCTTGGTAAAGGTTTTTACAAGCATCCTATAAAATAAAATATAGCACAGAAACACAGATGTT GAT TCAAATTTAAAAACCA TGCAGAGCCCAACTTCAATGTAAAGATATTGCACAGACACTTTAAAGCGGCCCAGTTTTACCACCATCAAACGATTTATGAGAACTATAATGCTGCACACACAAATGAGCAAAAATGAATTGATGTCAGGACTACCCTGAATCACTTGAGTTCGGCCAAACATTTGAAATTAATCCCAAAGAAATGGGCGTAAACATTATTGCAGAACATTATGCTGCTACA]
[-] EMBL BI804621             [  TTTTTTTTTTGGGAAACAATAAAAGCAAAGGGACTAGGGTAGAACGATGACTATTACTGACATCTTTTCATATATTTTTTTCAAACAAGAAAGTGCAAAGTGGAGGGGGCTAAAAGTACCCAAATAAAACAGGAACGGACAACAATCTAGTGGCTGGACATACAACAAAGTGCATACGAAGTACAATCTTATGTCTCCAGGGAGTGCAACCACCAAAAAGAGTCGGCCAATAGATTATCTCCTTTATGAGATAATCTACTGGTGGTAGCGGAAATAAATGGTGGGTCATTTGAATTATAAAATATAGGTTTATCTCCAACCACACGTCATATCTGCATGTGGTATAAAGAAGTCATCCAGTACAGCACCATATTTTCATCTGGGTAAAGGTTTTTACAAGCATCCTATAAAATAAAATATAGCACAGAAACACAGATATTGGGTCTCCAATTTAAAAACCAGTGGAAAGGCC                                                                                                                                                                                                                    ]




>consensus_3515#0
TTTTTTTTTTTTTGCAAACAATAAAAGCAAATGGACTAGTGTAGAACGATAACTATTACT
GACATCTTTTCATATATTTTTTTCAAACAAGAAATGCAAATGGAGGTGGCTAAAAGTACC
CAAATAAAACAGGAACGGACAACAATCTATGGCTTGACATACAACAAATGCATACAAAGT
ACAATCTTATGTCTCCAGGGAGTGCAACCACCAAAAAGAGTCGGCCAATAGATTATCTCC
TTTATGAGATAATCTACTGCTGGTAGCGGAAATAAATTGTTGGTCATTTGAATTATAAAA
TATAGGTTTATCTCCAACCACACGTCATATCTGCATGTGGTATAAAGAAGTCATCCAGTA
CAGCACCATATTTTCATCTTGGTAAAGGTTTTTACAAGCATCCTATAAAATAAAATATAG
CACAGAAACACAGATGTTGATTCAAATTTAAAAACCATGCAGAGCCCAACTTCAATGTAA
AGATATTGCACAGACACTTTAAAGCGGCCCAGTTTTACCACCATCAAACGATTTATGAGA
ACTATAATGCTGCACACACAAATGAGCAAAAATGAATTGATGTCAGGACTACCCTGAATC
ACTTGAGTTCGGCCAAACATTTGAAATTAATCCCAAAGAAATGGGCGTAAACATTATTGC
AGAACATTATGCTGCTACA

clustalw multiple alignements is not computed in this case