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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3536 cluster # 3536       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3536#0 length = 722 sequences # 2  

consensusID : consensus_3536#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 722
fasta sequence
                              [TACCAAAAAATGATGCATGTCAAAATTGAATATGCTAACCTTACCATGACTAACAAAACTTACACAAAGAAAACCAAGGTGGGTTCACCCTAATGTCCTCCCTTTTGCAAAGCACCTCAGACTAATACACCTTTGAGATTACATACTATATAA----ATATATATATAACTTTACATGAAACTTGCAGAAAACATTTCTTCTAGTAGAAACAATGATGCTAGAAAAGCATGCATTCACTTGTAGTTTTGGATTATCTTAGATAAAGATGAGTATGTGCCCACACCAGCACAGCAGAGCCCAACAACAATGATGAATACACATAGCAGTAC-CTGATACCAAGTCACTGTTCTCCTAAGGATTGCCAAGAAGCATGCACATGGTAGAATATACGCCACAAACATGGTGAGGAAGGACCCAACTAGTGACATAACAAGTCCGAAGAATGGAACAGAGAGAGCCACAATGAGGGAAGATAGCACAAGTGCTGATCTAAGCATGACTATGTTTGAGTATGTCTGTCGATTAGGAGGTAGCAACTCCTCCATACTAAGGGCAAGAGGAGTCATGGTCAGTGCATTTAGTTATTGGATTTGTCACCGTTGTCCAGACGGCAATCTTGGAAGCTACCAGATTAGATGGCAAGTTCAATGTGAACTGAGATTCTGTTGATTCACCAAACATTATGTATCCCATAATTGCAGCACCAGCAAAACAAAACAGTAGAT]

[+] EMBL CB679151             [TACCAAAAAATGATGCATGTCAAAATTGAATATGCTAACCTTACCATGACTAACAAAACTTACACAAAGAAAACCAAGGTGGGTTCACCCTAATGTCCTCCCTTTTGCAAAGCACCTCAGACTAATACACCTTTGAGATTACATACTATATAA    ATATATATATAACTTTACATGAAACTTGCAGAAAACATTTCTTCTAGTAGAAACAATGATGCTAGAAAAGCATGCATTCACTTGTAGTTTTGGATTATCTTAGATAAAGATGAGTATGTGCCCACACCAGCACAGCAGAGCCCAACAACAATGATGAATACACATAGCAGTAC CTGATACCAAGTCACTGTTCTCCTAAGGATTGCCAAGAAGCATGCACATGGTAGAATATACGCCACAAACATGGTGAGGAAGGACCCAACTAGTGACATAACAAGTCCGAAGAATGGAACAGAGAGAGCCACAATGAGGGAAGATAGCACAAGTGCTGATCTAAGCATGACTATGTTTGAGTATGTCTGTCGATTAGGAGGTAGCAACTCCTCCATACTAAGGGCAAGAGGAGTCATGGTCAGTGCATTTAGTTATTGGATTTGTCACCGTTGTCCAGACGGCAATCTTGGAAGCTACCAGATTAGATGGCAAGTTCAATGTGAACTGAGATTCTGTTGATTCACCAAACATTATGTATCCCATAATTGCAGCACCAGCAAAACAAAACAGTAGAT]
[+] EMBL CB618791             [                                                            TACACAAAGAAAACCAAGGGGGGTTCACCCTAATGTCCTCCCTTTTGCAAAGCCCCTCAGACTAATACACCTTTGAGATTACATACTATATAAATATATATATATATAACTTTACATGAAACTTGCAGAAAACATTTCTTCTAGTAGAAACAATGATGCTAGAAAAGCATGCATTCACTTGGAGTTTTGGATTATCTTAGATAAAGATGAGTATGTGCCCACACCAGCACAGCAGAGCCCAACAACAATGATGAATACACATAGCAGTACTCTGATACCAAGTCACTGTTCTCCTAAGGATTGCTTAGAAGCATGCACATGGTAGAATATACGCCACAAACATGGTGAGGAAGGACCCAACTA                                                                                                                                                                                                                                                                                                                ]


>consensus_3536#0 TACCAAAAAATGATGCATGTCAAAATTGAATATGCTAACCTTACCATGACTAACAAAACT TACACAAAGAAAACCAAGGTGGGTTCACCCTAATGTCCTCCCTTTTGCAAAGCACCTCAG ACTAATACACCTTTGAGATTACATACTATATAAATATATATATAACTTTACATGAAACTT GCAGAAAACATTTCTTCTAGTAGAAACAATGATGCTAGAAAAGCATGCATTCACTTGTAG TTTTGGATTATCTTAGATAAAGATGAGTATGTGCCCACACCAGCACAGCAGAGCCCAACA ACAATGATGAATACACATAGCAGTACCTGATACCAAGTCACTGTTCTCCTAAGGATTGCC AAGAAGCATGCACATGGTAGAATATACGCCACAAACATGGTGAGGAAGGACCCAACTAGT GACATAACAAGTCCGAAGAATGGAACAGAGAGAGCCACAATGAGGGAAGATAGCACAAGT GCTGATCTAAGCATGACTATGTTTGAGTATGTCTGTCGATTAGGAGGTAGCAACTCCTCC ATACTAAGGGCAAGAGGAGTCATGGTCAGTGCATTTAGTTATTGGATTTGTCACCGTTGT CCAGACGGCAATCTTGGAAGCTACCAGATTAGATGGCAAGTTCAATGTGAACTGAGATTC TGTTGATTCACCAAACATTATGTATCCCATAATTGCAGCACCAGCAAAACAAAACAGTAG AT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)