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Oryza sativa
cluster # 3588 cluster # 3588       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3588#0 length = 1349 sequences # 2  

consensusID : consensus_3588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1349
fasta sequence
                              [CTCTTTCTTCCTCCTCTCATCCTTCCGGTCGCCGCCGCCGCTGGTCCACCTTCCCTCCCCTCCCTCCCTTCTCCACCCAGAACCTTCCCCTGCATCTCTCTCCCGTTTCTCTCCGGGTCACGCATCGATCGGCCTCCCGGCGCCGTACTGCCTCTCTTCCTCGCCGCGCTGCACCGAGCGCTGGGTCCGCCGATTCGGCTGTGGCGCGGGTCAACCGCACCGACGCGGCGCCGCGCCTCGACGCCCGGAAGCTGCTCCTCTCCCCCCGCGCAACGCGCCGCGGACCTCGTGGCGGAGGCTCTGGTTAGTCGTCGTCGTTACCGGGGCTTCTCATGTTGGACCCAAGATCGGAAATCTACCCCACCATAGCGTATCGTCCTATCCAGCCTTCCGATCTCGAGGTTCTTGAGAATATTCACCTCGCGCTGTTTCCCATAAGATACGAGAGAGAGTTCTTCTTGAACGTGGTCAACGGCAATGGTATTATTTCTTGGGGTGCTGTGGATACCAGCAGATCAGATGACCGCAGAGATGAGCTGATAGGCTTTGTAACCACGAGAATAATTGCAGCACAAGATAGCGAGGTATGACATGCAAGATTGCATCGATCTTACTGATGAGCTCGGTGGAACTAATAATTTGGCTTGCAGATTGAGGACTTGTTTAGGTATAACAGCTCACGCAAAGATCTGACACTTCTGTATATCCTGACGCTCGGTGTAGTGGAGAGCTACAGAAACCTCGGCATAGCATCCTCACTGGTCCGAGAGGTGATTAGATATGCTGCAAGTATCTCAAATTGCAGGGGTGTCTATTTGCATGTCATCTCATATAACCAACCTGCTATCAGCTTTTACAATAAGATGCTATTTAAGCTTGTCAGACGACTTCCACATTTCTATTACATAAGAGGGCAGCATTATGATTCATACTTGTTTGTGTACTATGTCAATGGGGGCCGTTCGCCTTGCTCACCACTGGAGGTCATAACTTCATTTGTTGTTGACTTCAGGGCTTTCCTGAAGATGGTGGTTGCCAGGTTCTGGAACAAAGAGGAGAGAAGTACACCCAGATGGTCCAGGTGCAAGGAATCGACCACTCTCTTGGTATCTCAGAATAACAAGAGGATCATTGGTGGTGATGATACGAGATGTCATGTCTAACTTTAGGTGCAGCTGGGATTTTGTTTTCTCTTGTTTTTGTGGAAACCTCAGTTTGTTTAAAAACCGTAGCTTGCTACGTTGTTGTATCTGATAAGTTAGCAAACCAGGTACATAATTTCTCGATAGTCATAGTCACATTCATTTGTAAAGAGAGGAAAACTGAAAGGAGAGAAATAAATGTCACCT]

[+] EMBL CB622753             [CTCTTTCTTCCTCCTCTCATCCTTCCGGTCGCCGCCGCCGCTGGTCCACCTTCCCTCCCCTCCCTCCCTTCTCCACCCAGAACCTTCCCCTGCATCTCTCTCCCGTTTCTCTCCGGGTCACGCATCGATCGGCCTCCCGGCGCCGTACTGCCTCTCTTCCTCGCCGCGCTGCACCGAGCGCTGGGTCCGCCGATTCGGCTGTGGCGCGGGTCAACCGCACCGACGCGGCGCCGCGCCTCGACGCCCGGAAGCTGCTCCTCTCCCCCCGCGCAACGCGCCGCGGACCTCGTGGCGGAGGCTCTGGTTAGTCGTCGTCGTTACCGGGGCTTCTCATGTTGGACCCAAGATCGGAAATCTACCCCACCATAGCGTATCGTCCTATCCAGCCTTCCGATCTCGAGGTTCTTGAGAATATTCACCTCGCGCTGTTTCCCATAAGATACGAGAGAGAGTTCTTCTTGAACGTGGTCAACGGCAATGGTATTATTTCTTGGGGTGCTGTGGATACCAGCAGATCAGATGACCGCAGAGATGAGCTGATAGGCTTTGTAACCACGAGAATAATTGCAGCACAAGATAGCGAGGTATGACATGCAAGATTGCATCGATCTTACTGATGAGCTCGGTGGAACTAATAATTTGGCTTGCAGATTGAGGACTTGTTTAGGTATAACAGCTCACGCAAAGATCTGACACTTCTGTATATCCTGACGCTCGGTGTAGTGGAGAGCTACAGAAACCTCGGCATAGCATCCTCACTGGTCCGAGAGGTGATTAGATATGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB622754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCGAGGTATGACATGCAAGATTGCATCGATCTTACTGATGAGCTCGGTGGAACTAATAATTTGGCTTGCAGATTGAGGACTTGTTTAGGTATAACAGCTCACGCAAAGATCTGACACTTCTGTATATCCTGACGCTCGGTGTAGTGGAGAGCTACAGAAACCTCGGCATAGCATCCTCACTGGTCCGAGAGGTGATTAAATATGCTGCAAGTATCTCAAATTGCAGGGGTGTCTATTTGCATGTCATCTCATATAACCAACCTGCTATCAGCTTTTACAATAAGATGCTATTTAAGCTTGTCAGACGACTTCCACATTTCTATTACATAAGAGGGCAGCATTATGATTCATACTTGTTTGTGTACTATGTCAATGGGGGCCGTTCGCCTTGCTCACCACTGGAGGTCATAACTTCATTTGTTGTTGACTTCAGGGCTTTCCTGAAGATGGTGGTTGCCAGGTTCTGGAACAAAGAGGAGAGAAGTACACCCAGATGGTCCAGGTGCAAGGAATCGACCACTCTCTTGGTATCTCAGAATAACAAGAGGATCATTGGTGGTGATGATACGAGATGTCATGTCTAACTTTAGGTGCAGCTGGGATTTTGTTTTCTCTTGTTTTTGTGGAAACCTCAGTTTGTTTAAAAACCGTAGCTTGCTACGTTGTTGTATCTGATAAGTTAGCAAACCAGGTACATAATTTCTCGATAGTCATAGTCACATTCATTTGTAAAGAGAGGAAAACTGAAAGGAGAGAAATAAATGTCACCT]


>consensus_3588#0 CTCTTTCTTCCTCCTCTCATCCTTCCGGTCGCCGCCGCCGCTGGTCCACCTTCCCTCCCC TCCCTCCCTTCTCCACCCAGAACCTTCCCCTGCATCTCTCTCCCGTTTCTCTCCGGGTCA CGCATCGATCGGCCTCCCGGCGCCGTACTGCCTCTCTTCCTCGCCGCGCTGCACCGAGCG CTGGGTCCGCCGATTCGGCTGTGGCGCGGGTCAACCGCACCGACGCGGCGCCGCGCCTCG ACGCCCGGAAGCTGCTCCTCTCCCCCCGCGCAACGCGCCGCGGACCTCGTGGCGGAGGCT CTGGTTAGTCGTCGTCGTTACCGGGGCTTCTCATGTTGGACCCAAGATCGGAAATCTACC CCACCATAGCGTATCGTCCTATCCAGCCTTCCGATCTCGAGGTTCTTGAGAATATTCACC TCGCGCTGTTTCCCATAAGATACGAGAGAGAGTTCTTCTTGAACGTGGTCAACGGCAATG GTATTATTTCTTGGGGTGCTGTGGATACCAGCAGATCAGATGACCGCAGAGATGAGCTGA TAGGCTTTGTAACCACGAGAATAATTGCAGCACAAGATAGCGAGGTATGACATGCAAGAT TGCATCGATCTTACTGATGAGCTCGGTGGAACTAATAATTTGGCTTGCAGATTGAGGACT TGTTTAGGTATAACAGCTCACGCAAAGATCTGACACTTCTGTATATCCTGACGCTCGGTG TAGTGGAGAGCTACAGAAACCTCGGCATAGCATCCTCACTGGTCCGAGAGGTGATTAGAT ATGCTGCAAGTATCTCAAATTGCAGGGGTGTCTATTTGCATGTCATCTCATATAACCAAC CTGCTATCAGCTTTTACAATAAGATGCTATTTAAGCTTGTCAGACGACTTCCACATTTCT ATTACATAAGAGGGCAGCATTATGATTCATACTTGTTTGTGTACTATGTCAATGGGGGCC GTTCGCCTTGCTCACCACTGGAGGTCATAACTTCATTTGTTGTTGACTTCAGGGCTTTCC TGAAGATGGTGGTTGCCAGGTTCTGGAACAAAGAGGAGAGAAGTACACCCAGATGGTCCA GGTGCAAGGAATCGACCACTCTCTTGGTATCTCAGAATAACAAGAGGATCATTGGTGGTG ATGATACGAGATGTCATGTCTAACTTTAGGTGCAGCTGGGATTTTGTTTTCTCTTGTTTT TGTGGAAACCTCAGTTTGTTTAAAAACCGTAGCTTGCTACGTTGTTGTATCTGATAAGTT AGCAAACCAGGTACATAATTTCTCGATAGTCATAGTCACATTCATTTGTAAAGAGAGGAA AACTGAAAGGAGAGAAATAAATGTCACCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)