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Oryza sativa
cluster # 3605 cluster # 3605       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3605#0 length = 2284 sequences # 1  
consensus_3605#1 length = 2060 sequences # 1  

consensusID : consensus_3605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2284
fasta sequence
                              [ACCGAGTTTGTATACTCGATAAATTAAGAGCGAAGCTGAGGCCGGCGCGTGCTGTGCCCCGCCCGGGGTCGGGCTCAGCCGCCGCGCTCAAGGCGCTACGGCTCGTGCTCTTTGCCGCTGCCATGGCCGCAGCGCGTGCAGCCGTGGACGAACCGTCGCTGCGGTGGACGTCACCAACCGGTAACCGTTACGACCTGAACGGGTTGGCGGACCCGGCGCTGAGCCCTGCGGTGAGCACATGGACGCAGCCAACGCGATGGCCCAATTTGGACGGGCTCATGAACGTCGTCGCGTACGACGTCGGTCGCGGCGCCATGCGCTTTCGGTTGGGGCCACTGGGATTGGCCGGCGCCGGTGACGACGCACGCTGTGATGCGATGTTGTGCGTTTACCCGCGCACTAACCCCAAACTCCGTGCTTTGCCTCTGTCGGCCAACGCCACGACCGCGTATGTGGAGGACCCGGCCGTCGTCGCGCTGCCGGCGGGCGGTGCGCGCCCATGGTCGATGGCGCCGCGTCCGCTGGTGCTGTGGAACGCGTCGACACCGCCGGCGTTCACGGAGTCCGATGATCCGGAGTTGCGCTCTGTGACGCTCAGTTTCGCGCGAAACGCATCCGCTGCTGCCGGTACGTGTTGGACCGACGAGTGGGCCGACACCGGCGGCGCGCACGCGCTCGATCTACTCGTCGTTTGCGCTGACGATGCGTTCGCTTACGCGTACACACGCGAAATGCCGCCGCCGTTTCCCACACCCGACGACCTCTGGTGGCAGTGGTATGTGGACGGCCGACGCGAATGGCGCAAGCGCTGTGACGCGTTCAACGCAACCGGAGAGCTGTACGGCGCCGATGTGAGCTTTGGTCTGATGAAGTCCTCCGGCGAAGCTGATTGTACCACTTCGCTGTTGGCCGTTGTGGTGTCGCCTTTGGGCTGTCCGAACCGGACCGTTGCGTCGGTGGCCGCTGCCCACACCGCACGCACGGGCCAGCCCGTTGCGCCACCCGCCGTCGACGGCTGTGCGCGGTACCACGCGTGTGGGCATGGTAGCACGTGCCGCGTCGACACGACGGCACCGCGCCACAGCGGCGCGTACAACTGCACGTGCAGTCCGCTGCTGCCGTTCGGTGGGCGGAACTGCACGACGCTGTGGCATTGCGCGCGCGACTTTGCCGGTGTCGCGACGCAGCGCTGTTCCGCGTCCGGTGCGTGCGATGCGGTGACGGGCGAGTGCCGGTGCGCGCCGGGCCGCACGCGCTTCGACTGCAGCGTCACAGCGGCAGCGCTGACGGACGCACAGGTGGAGGTGACACACCACACGTCGCTCAGCCCTACGCGTTTGCAGCTGCAGCTGTGCGAATGGATGGGTGTCGCGCGTGATGCGTGCAGCAGCGATGTGCTGCGGGTGGCTGTCCGGCCCGGCCCGCGGTACACGACGGTGTCGGTTTGGGGCCTCACAGCGGCTGCAATCGCGGCGTGTCCGTTTGCACTGCTCACTCTCGAAACGCTCGCCGCCACGGCCGACGCCGAACACATGACGGCAGCCGGTGTGGCCGCCATCCGCCTTGGCGTGGCGCAGCCGTGGATATGGGTGGACCTAACGGTGCAGTCACAGTGCAGCGCATCGTCCGGTGCTCCGGGCGGCGCGGAGTGCGCCCAAACGGATTGGTTTCAGAGTCGCGGTACTGCGAACGCGAACACAAATGACATACCCGCCGATCTGGCGGTCATGTGGGCACTGCTGGTCGCGGCGGTGCTGCTAACCACCGGCTTTGTGGTGCTGCGCTGGCGCTGGGCCATGAGCGGTGCGCTGTTGGAGCGCTGGCGGCAGTCGCGCACGTTCAGCGCCGCCAACGCCGAAGCGCATGCCCGGCATCACGCGCAGTTGCAACAGCCGCAACAGCAACCGCAAGCCGCCATAGCCATCGTACAAGCGTCAGGGCCTGAGCAACCGGTGCCGCCCGCAGCGCCAGCACCAGCGCCAGTGCTCGTGTCCGTACCGCCACCGGCCGTTGTGCCCTGTGAGCCGCCGCCGATGTGGGCGTTCACCCGTTTTGTACCGCCCGCCGCCGCAGCGTACCTGCAGTCGGCGCCGCGCGCTGTGGTTGTGGTGAACGAAGACGAACGCGGCGAATGGTACGAATAAGCTCACTCGCCGCAGAGACTCCTTTAGTTTCGTGTTTGCGTCTCAGTGCTGTATTTTTCAATATCATCTGTCTGTCATGTTCTGTCTGTTTGTAGTTCACGCGCGAGCGCACAGTTTCGATCCGCCGCTCAACTCAGCCA]

[+] EMBL AK110324             [ACCGAGTTTGTATACTCGATAAATTAAGAGCGAAGCTGAGGCCGGCGCGTGCTGTGCCCCGCCCGGGGTCGGGCTCAGCCGCCGCGCTCAAGGCGCTACGGCTCGTGCTCTTTGCCGCTGCCATGGCCGCAGCGCGTGCAGCCGTGGACGAACCGTCGCTGCGGTGGACGTCACCAACCGGTAACCGTTACGACCTGAACGGGTTGGCGGACCCGGCGCTGAGCCCTGCGGTGAGCACATGGACGCAGCCAACGCGATGGCCCAATTTGGACGGGCTCATGAACGTCGTCGCGTACGACGTCGGTCGCGGCGCCATGCGCTTTCGGTTGGGGCCACTGGGATTGGCCGGCGCCGGTGACGACGCACGCTGTGATGCGATGTTGTGCGTTTACCCGCGCACTAACCCCAAACTCCGTGCTTTGCCTCTGTCGGCCAACGCCACGACCGCGTATGTGGAGGACCCGGCCGTCGTCGCGCTGCCGGCGGGCGGTGCGCGCCCATGGTCGATGGCGCCGCGTCCGCTGGTGCTGTGGAACGCGTCGACACCGCCGGCGTTCACGGAGTCCGATGATCCGGAGTTGCGCTCTGTGACGCTCAGTTTCGCGCGAAACGCATCCGCTGCTGCCGGTACGTGTTGGACCGACGAGTGGGCCGACACCGGCGGCGCGCACGCGCTCGATCTACTCGTCGTTTGCGCTGACGATGCGTTCGCTTACGCGTACACACGCGAAATGCCGCCGCCGTTTCCCACACCCGACGACCTCTGGTGGCAGTGGTATGTGGACGGCCGACGCGAATGGCGCAAGCGCTGTGACGCGTTCAACGCAACCGGAGAGCTGTACGGCGCCGATGTGAGCTTTGGTCTGATGAAGTCCTCCGGCGAAGCTGATTGTACCACTTCGCTGTTGGCCGTTGTGGTGTCGCCTTTGGGCTGTCCGAACCGGACCGTTGCGTCGGTGGCCGCTGCCCACACCGCACGCACGGGCCAGCCCGTTGCGCCACCCGCCGTCGACGGCTGTGCGCGGTACCACGCGTGTGGGCATGGTAGCACGTGCCGCGTCGACACGACGGCACCGCGCCACAGCGGCGCGTACAACTGCACGTGCAGTCCGCTGCTGCCGTTCGGTGGGCGGAACTGCACGACGCTGTGGCATTGCGCGCGCGACTTTGCCGGTGTCGCGACGCAGCGCTGTTCCGCGTCCGGTGCGTGCGATGCGGTGACGGGCGAGTGCCGGTGCGCGCCGGGCCGCACGCGCTTCGACTGCAGCGTCACAGCGGCAGCGCTGACGGACGCACAGGTGGAGGTGACACACCACACGTCGCTCAGCCCTACGCGTTTGCAGCTGCAGCTGTGCGAATGGATGGGTGTCGCGCGTGATGCGTGCAGCAGCGATGTGCTGCGGGTGGCTGTCCGGCCCGGCCCGCGGTACACGACGGTGTCGGTTTGGGGCCTCACAGCGGCTGCAATCGCGGCGTGTCCGTTTGCACTGCTCACTCTCGAAACGCTCGCCGCCACGGCCGACGCCGAACACATGACGGCAGCCGGTGTGGCCGCCATCCGCCTTGGCGTGGCGCAGCCGTGGATATGGGTGGACCTAACGGTGCAGTCACAGTGCAGCGCATCGTCCGGTGCTCCGGGCGGCGCGGAGTGCGCCCAAACGGATTGGTTTCAGAGTCGCGGTACTGCGAACGCGAACACAAATGACATACCCGCCGATCTGGCGGTCATGTGGGCACTGCTGGTCGCGGCGGTGCTGCTAACCACCGGCTTTGTGGTGCTGCGCTGGCGCTGGGCCATGAGCGGTGCGCTGTTGGAGCGCTGGCGGCAGTCGCGCACGTTCAGCGCCGCCAACGCCGAAGCGCATGCCCGGCATCACGCGCAGTTGCAACAGCCGCAACAGCAACCGCAAGCCGCCATAGCCATCGTACAAGCGTCAGGGCCTGAGCAACCGGTGCCGCCCGCAGCGCCAGCACCAGCGCCAGTGCTCGTGTCCGTACCGCCACCGGCCGTTGTGCCCTGTGAGCCGCCGCCGATGTGGGCGTTCACCCGTTTTGTACCGCCCGCCGCCGCAGCGTACCTGCAGTCGGCGCCGCGCGCTGTGGTTGTGGTGAACGAAGACGAACGCGGCGAATGGTACGAATAAGCTCACTCGCCGCAGAGACTCCTTTAGTTTCGTGTTTGCGTCTCAGTGCTGTATTTTTCAATATCATCTGTCTGTCATGTTCTGTCTGTTTGTAGTTCACGCGCGAGCGCACAGTTTCGATCCGCCGCTCAACTCAGCCA]


>consensus_3605#0 ACCGAGTTTGTATACTCGATAAATTAAGAGCGAAGCTGAGGCCGGCGCGTGCTGTGCCCC GCCCGGGGTCGGGCTCAGCCGCCGCGCTCAAGGCGCTACGGCTCGTGCTCTTTGCCGCTG CCATGGCCGCAGCGCGTGCAGCCGTGGACGAACCGTCGCTGCGGTGGACGTCACCAACCG GTAACCGTTACGACCTGAACGGGTTGGCGGACCCGGCGCTGAGCCCTGCGGTGAGCACAT GGACGCAGCCAACGCGATGGCCCAATTTGGACGGGCTCATGAACGTCGTCGCGTACGACG TCGGTCGCGGCGCCATGCGCTTTCGGTTGGGGCCACTGGGATTGGCCGGCGCCGGTGACG ACGCACGCTGTGATGCGATGTTGTGCGTTTACCCGCGCACTAACCCCAAACTCCGTGCTT TGCCTCTGTCGGCCAACGCCACGACCGCGTATGTGGAGGACCCGGCCGTCGTCGCGCTGC CGGCGGGCGGTGCGCGCCCATGGTCGATGGCGCCGCGTCCGCTGGTGCTGTGGAACGCGT CGACACCGCCGGCGTTCACGGAGTCCGATGATCCGGAGTTGCGCTCTGTGACGCTCAGTT TCGCGCGAAACGCATCCGCTGCTGCCGGTACGTGTTGGACCGACGAGTGGGCCGACACCG GCGGCGCGCACGCGCTCGATCTACTCGTCGTTTGCGCTGACGATGCGTTCGCTTACGCGT ACACACGCGAAATGCCGCCGCCGTTTCCCACACCCGACGACCTCTGGTGGCAGTGGTATG TGGACGGCCGACGCGAATGGCGCAAGCGCTGTGACGCGTTCAACGCAACCGGAGAGCTGT ACGGCGCCGATGTGAGCTTTGGTCTGATGAAGTCCTCCGGCGAAGCTGATTGTACCACTT CGCTGTTGGCCGTTGTGGTGTCGCCTTTGGGCTGTCCGAACCGGACCGTTGCGTCGGTGG CCGCTGCCCACACCGCACGCACGGGCCAGCCCGTTGCGCCACCCGCCGTCGACGGCTGTG CGCGGTACCACGCGTGTGGGCATGGTAGCACGTGCCGCGTCGACACGACGGCACCGCGCC ACAGCGGCGCGTACAACTGCACGTGCAGTCCGCTGCTGCCGTTCGGTGGGCGGAACTGCA CGACGCTGTGGCATTGCGCGCGCGACTTTGCCGGTGTCGCGACGCAGCGCTGTTCCGCGT CCGGTGCGTGCGATGCGGTGACGGGCGAGTGCCGGTGCGCGCCGGGCCGCACGCGCTTCG ACTGCAGCGTCACAGCGGCAGCGCTGACGGACGCACAGGTGGAGGTGACACACCACACGT CGCTCAGCCCTACGCGTTTGCAGCTGCAGCTGTGCGAATGGATGGGTGTCGCGCGTGATG CGTGCAGCAGCGATGTGCTGCGGGTGGCTGTCCGGCCCGGCCCGCGGTACACGACGGTGT CGGTTTGGGGCCTCACAGCGGCTGCAATCGCGGCGTGTCCGTTTGCACTGCTCACTCTCG AAACGCTCGCCGCCACGGCCGACGCCGAACACATGACGGCAGCCGGTGTGGCCGCCATCC GCCTTGGCGTGGCGCAGCCGTGGATATGGGTGGACCTAACGGTGCAGTCACAGTGCAGCG CATCGTCCGGTGCTCCGGGCGGCGCGGAGTGCGCCCAAACGGATTGGTTTCAGAGTCGCG GTACTGCGAACGCGAACACAAATGACATACCCGCCGATCTGGCGGTCATGTGGGCACTGC TGGTCGCGGCGGTGCTGCTAACCACCGGCTTTGTGGTGCTGCGCTGGCGCTGGGCCATGA GCGGTGCGCTGTTGGAGCGCTGGCGGCAGTCGCGCACGTTCAGCGCCGCCAACGCCGAAG CGCATGCCCGGCATCACGCGCAGTTGCAACAGCCGCAACAGCAACCGCAAGCCGCCATAG CCATCGTACAAGCGTCAGGGCCTGAGCAACCGGTGCCGCCCGCAGCGCCAGCACCAGCGC CAGTGCTCGTGTCCGTACCGCCACCGGCCGTTGTGCCCTGTGAGCCGCCGCCGATGTGGG CGTTCACCCGTTTTGTACCGCCCGCCGCCGCAGCGTACCTGCAGTCGGCGCCGCGCGCTG TGGTTGTGGTGAACGAAGACGAACGCGGCGAATGGTACGAATAAGCTCACTCGCCGCAGA GACTCCTTTAGTTTCGTGTTTGCGTCTCAGTGCTGTATTTTTCAATATCATCTGTCTGTC ATGTTCTGTCTGTTTGTAGTTCACGCGCGAGCGCACAGTTTCGATCCGCCGCTCAACTCA GCCA



consensusID : consensus_3605#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2060
fasta sequence
                              [ACCGAGTTTGTATACTCGATAAATTAAGGCGATGCTGAGGGCTGTAGCGATTGCTCTCAGTGTGCTGCTGGTCGCGACGGGCGCGGCGGCAGCGGCCGGTGACTACGTGGTGGTGGCGACGAACCAGCGCGTGCGTTGCCCCACGTCGGGCCTCGTCCACGCGGAGATGGTGGATGAGCTGCCGACCGCGACGGAGTTGGCGGCGGAGGCGCAGGTGAACGTGCATTCGCTCGACTCCGCGAATGGTATCGTGACGTCGCATTCGGTGGACTCTGCGGAGCTGCATCCGCTGCGCAATGGCGTGGCCACTACCGTGTTCGCGTCGGCGCCGATTCTGTCCGCCGAAGCGCAGGCCGAAGCGGACACGCGCGCGCAGGAGCCAGGGTTGTTCACACCCGACGCGGTGCAGAGCGACGGGCTGGCGCACTCGGCGTATGTGGAGGTGGAGGAGGGCGTGCAGCTGCTGACGGAGACCGAGCGCCTTGCGATGATGGAGACCGCTGCGAACGCGCACACGCACGCGCAGGTCGGAGTCGGCAGCGGCCCGCGCAAGTACCTGGTGCACGCGGGGATGAACAACGGCGGCAGCGTGTTGGCGCGCTTCGAGAAGCAGACCGCCGCGACCTGTCAGGAGCGGTGTGAGGGCGACGCGCAGTGCGTCGGCTTCAGCGTCGTCCGTAACCCGCAGAAGCGCAAGGGCCTGTGTACGCTGCGGAGCACGTGGGGGTCGGCACTGGACAATCCGGATTTCGACTCGTATCAGGCGCACGACTACAGCGTCGCGCCGACGCCGTTTCAGGACATTGAGACGCACGTGAAGACGGCCATTCCCGGGCAGCAGCTGCTGGTTTTGGCGGACTTCGCGCGCGTCAAGCCCGCGCGCAATCAGAAGACGGCGGAGCTGCTGGTCAGCGTCGACCACAACCAGCCCGACGCCGTGTGGACGAACGTGCCGTCGAACTACCGCGACGCCAACTCGTTCCGCGCACCGTCCGTTGCGGGCGTCACGAACCCGCTCAAGTCGGCCGGTGACCACACCGTTCGCATCGATTACTCGCGCGCGTTTGAGACGCCCGCTCAGATGGACGACCGCAGCGGCTGCCAGCAGCAGCGCCTGACGGCCATTCCCTTCCCCATTGAGCTGTCGGCCACGCGCGTGTTCGACGTCGTCGGGCAGCACTGGAACCTGGCGCCTGCCTCCTCCATCACTGCGAAGAACTTCGTCGCCATCCCCGGGGGCGTTCCGGAGGGGGATGTGGAGGGCGACGGCGGTGCCAGCGCGGCGGGCGATGCGGGTTCGATGAGCATCAAACTCGCAGTGCCGGAGGACGGCGCGCGTGTGCTCGTGTTCGCCGACATCTCGCGCGTGCAGCACTCGCACGGATGGACGAACTCCGTCTTCCGCATTACCGTCGACAATCAGGAAATCGCATTCACCAACACCGGTGAGCACTACGGTTTCCAGTACCGCGCCATTGCACTGCGCGGCGCTTCGGGCAGTCTGAAGAAGGGAGAGCACACGATCGCGGTACAGGCCAAGACGCAGCGCGGCAAACTGTTCTTTATCTCTGACGGTAACGGGTTCCAGCAGCGGCGCCTGACGGCACTGGTCGTGCCGAAGGGCAATCTGTGGAACAAGAAGTGAAACCTCAGCACGGCGTGGCTCAAGCCCTCGAAGTGGGCGGAGCTGCCGGGCGCGCCCATGCGCCTCACAGTGACGACGGAGCAGATGGGGCAGCTGCTCGTCACCGTCGGCATCAGCCGCGTGCAGTCGTGGGGTAACGGCAACGTCGAGCTGCGGCTGGTGGTGAGCGGCGAAAAGGACGACGTCGCAGAGGGCGAGGGCTACGAGATCGCGCGTACGAACACGGGCAACGTCAATGGGTGGCGCTATCAGGACGTGTCGTTCCACGCCGTCACGCCGCTGCTGACGCCGGGCACCCACACAGTGCGCGTTCAGGTGCGCAGCAAATCGGGCTCAACGGTCGTGTTTTATAACGACGGCAATGGCATGCAGCAGCGCCGCCTCTCAGCCGTGCTCATACCGCCGTCGGCCGGGC]

[+] EMBL AK110484             [ACCGAGTTTGTATACTCGATAAATTAAGGCGATGCTGAGGGCTGTAGCGATTGCTCTCAGTGTGCTGCTGGTCGCGACGGGCGCGGCGGCAGCGGCCGGTGACTACGTGGTGGTGGCGACGAACCAGCGCGTGCGTTGCCCCACGTCGGGCCTCGTCCACGCGGAGATGGTGGATGAGCTGCCGACCGCGACGGAGTTGGCGGCGGAGGCGCAGGTGAACGTGCATTCGCTCGACTCCGCGAATGGTATCGTGACGTCGCATTCGGTGGACTCTGCGGAGCTGCATCCGCTGCGCAATGGCGTGGCCACTACCGTGTTCGCGTCGGCGCCGATTCTGTCCGCCGAAGCGCAGGCCGAAGCGGACACGCGCGCGCAGGAGCCAGGGTTGTTCACACCCGACGCGGTGCAGAGCGACGGGCTGGCGCACTCGGCGTATGTGGAGGTGGAGGAGGGCGTGCAGCTGCTGACGGAGACCGAGCGCCTTGCGATGATGGAGACCGCTGCGAACGCGCACACGCACGCGCAGGTCGGAGTCGGCAGCGGCCCGCGCAAGTACCTGGTGCACGCGGGGATGAACAACGGCGGCAGCGTGTTGGCGCGCTTCGAGAAGCAGACCGCCGCGACCTGTCAGGAGCGGTGTGAGGGCGACGCGCAGTGCGTCGGCTTCAGCGTCGTCCGTAACCCGCAGAAGCGCAAGGGCCTGTGTACGCTGCGGAGCACGTGGGGGTCGGCACTGGACAATCCGGATTTCGACTCGTATCAGGCGCACGACTACAGCGTCGCGCCGACGCCGTTTCAGGACATTGAGACGCACGTGAAGACGGCCATTCCCGGGCAGCAGCTGCTGGTTTTGGCGGACTTCGCGCGCGTCAAGCCCGCGCGCAATCAGAAGACGGCGGAGCTGCTGGTCAGCGTCGACCACAACCAGCCCGACGCCGTGTGGACGAACGTGCCGTCGAACTACCGCGACGCCAACTCGTTCCGCGCACCGTCCGTTGCGGGCGTCACGAACCCGCTCAAGTCGGCCGGTGACCACACCGTTCGCATCGATTACTCGCGCGCGTTTGAGACGCCCGCTCAGATGGACGACCGCAGCGGCTGCCAGCAGCAGCGCCTGACGGCCATTCCCTTCCCCATTGAGCTGTCGGCCACGCGCGTGTTCGACGTCGTCGGGCAGCACTGGAACCTGGCGCCTGCCTCCTCCATCACTGCGAAGAACTTCGTCGCCATCCCCGGGGGCGTTCCGGAGGGGGATGTGGAGGGCGACGGCGGTGCCAGCGCGGCGGGCGATGCGGGTTCGATGAGCATCAAACTCGCAGTGCCGGAGGACGGCGCGCGTGTGCTCGTGTTCGCCGACATCTCGCGCGTGCAGCACTCGCACGGATGGACGAACTCCGTCTTCCGCATTACCGTCGACAATCAGGAAATCGCATTCACCAACACCGGTGAGCACTACGGTTTCCAGTACCGCGCCATTGCACTGCGCGGCGCTTCGGGCAGTCTGAAGAAGGGAGAGCACACGATCGCGGTACAGGCCAAGACGCAGCGCGGCAAACTGTTCTTTATCTCTGACGGTAACGGGTTCCAGCAGCGGCGCCTGACGGCACTGGTCGTGCCGAAGGGCAATCTGTGGAACAAGAAGTGAAACCTCAGCACGGCGTGGCTCAAGCCCTCGAAGTGGGCGGAGCTGCCGGGCGCGCCCATGCGCCTCACAGTGACGACGGAGCAGATGGGGCAGCTGCTCGTCACCGTCGGCATCAGCCGCGTGCAGTCGTGGGGTAACGGCAACGTCGAGCTGCGGCTGGTGGTGAGCGGCGAAAAGGACGACGTCGCAGAGGGCGAGGGCTACGAGATCGCGCGTACGAACACGGGCAACGTCAATGGGTGGCGCTATCAGGACGTGTCGTTCCACGCCGTCACGCCGCTGCTGACGCCGGGCACCCACACAGTGCGCGTTCAGGTGCGCAGCAAATCGGGCTCAACGGTCGTGTTTTATAACGACGGCAATGGCATGCAGCAGCGCCGCCTCTCAGCCGTGCTCATACCGCCGTCGGCCGGGC]


>consensus_3605#1 ACCGAGTTTGTATACTCGATAAATTAAGGCGATGCTGAGGGCTGTAGCGATTGCTCTCAG TGTGCTGCTGGTCGCGACGGGCGCGGCGGCAGCGGCCGGTGACTACGTGGTGGTGGCGAC GAACCAGCGCGTGCGTTGCCCCACGTCGGGCCTCGTCCACGCGGAGATGGTGGATGAGCT GCCGACCGCGACGGAGTTGGCGGCGGAGGCGCAGGTGAACGTGCATTCGCTCGACTCCGC GAATGGTATCGTGACGTCGCATTCGGTGGACTCTGCGGAGCTGCATCCGCTGCGCAATGG CGTGGCCACTACCGTGTTCGCGTCGGCGCCGATTCTGTCCGCCGAAGCGCAGGCCGAAGC GGACACGCGCGCGCAGGAGCCAGGGTTGTTCACACCCGACGCGGTGCAGAGCGACGGGCT GGCGCACTCGGCGTATGTGGAGGTGGAGGAGGGCGTGCAGCTGCTGACGGAGACCGAGCG CCTTGCGATGATGGAGACCGCTGCGAACGCGCACACGCACGCGCAGGTCGGAGTCGGCAG CGGCCCGCGCAAGTACCTGGTGCACGCGGGGATGAACAACGGCGGCAGCGTGTTGGCGCG CTTCGAGAAGCAGACCGCCGCGACCTGTCAGGAGCGGTGTGAGGGCGACGCGCAGTGCGT CGGCTTCAGCGTCGTCCGTAACCCGCAGAAGCGCAAGGGCCTGTGTACGCTGCGGAGCAC GTGGGGGTCGGCACTGGACAATCCGGATTTCGACTCGTATCAGGCGCACGACTACAGCGT CGCGCCGACGCCGTTTCAGGACATTGAGACGCACGTGAAGACGGCCATTCCCGGGCAGCA GCTGCTGGTTTTGGCGGACTTCGCGCGCGTCAAGCCCGCGCGCAATCAGAAGACGGCGGA GCTGCTGGTCAGCGTCGACCACAACCAGCCCGACGCCGTGTGGACGAACGTGCCGTCGAA CTACCGCGACGCCAACTCGTTCCGCGCACCGTCCGTTGCGGGCGTCACGAACCCGCTCAA GTCGGCCGGTGACCACACCGTTCGCATCGATTACTCGCGCGCGTTTGAGACGCCCGCTCA GATGGACGACCGCAGCGGCTGCCAGCAGCAGCGCCTGACGGCCATTCCCTTCCCCATTGA GCTGTCGGCCACGCGCGTGTTCGACGTCGTCGGGCAGCACTGGAACCTGGCGCCTGCCTC CTCCATCACTGCGAAGAACTTCGTCGCCATCCCCGGGGGCGTTCCGGAGGGGGATGTGGA GGGCGACGGCGGTGCCAGCGCGGCGGGCGATGCGGGTTCGATGAGCATCAAACTCGCAGT GCCGGAGGACGGCGCGCGTGTGCTCGTGTTCGCCGACATCTCGCGCGTGCAGCACTCGCA CGGATGGACGAACTCCGTCTTCCGCATTACCGTCGACAATCAGGAAATCGCATTCACCAA CACCGGTGAGCACTACGGTTTCCAGTACCGCGCCATTGCACTGCGCGGCGCTTCGGGCAG TCTGAAGAAGGGAGAGCACACGATCGCGGTACAGGCCAAGACGCAGCGCGGCAAACTGTT CTTTATCTCTGACGGTAACGGGTTCCAGCAGCGGCGCCTGACGGCACTGGTCGTGCCGAA GGGCAATCTGTGGAACAAGAAGTGAAACCTCAGCACGGCGTGGCTCAAGCCCTCGAAGTG GGCGGAGCTGCCGGGCGCGCCCATGCGCCTCACAGTGACGACGGAGCAGATGGGGCAGCT GCTCGTCACCGTCGGCATCAGCCGCGTGCAGTCGTGGGGTAACGGCAACGTCGAGCTGCG GCTGGTGGTGAGCGGCGAAAAGGACGACGTCGCAGAGGGCGAGGGCTACGAGATCGCGCG TACGAACACGGGCAACGTCAATGGGTGGCGCTATCAGGACGTGTCGTTCCACGCCGTCAC GCCGCTGCTGACGCCGGGCACCCACACAGTGCGCGTTCAGGTGCGCAGCAAATCGGGCTC AACGGTCGTGTTTTATAACGACGGCAATGGCATGCAGCAGCGCCGCCTCTCAGCCGTGCT CATACCGCCGTCGGCCGGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3605#0      ACCGAGTTTGTATACTCGATAAATTAAGAGCGAAGCTGAGGCCGGCGCGTGCTGTGCCCC 60
consensus_3605#1      ACCGAGTTTGTATACTCGATAAATTAAG-GCGATGCTGAGGGCTGTAGCGATTGCTCTCA 59
                      **************************** **** ******* * *       **  * * 

consensus_3605#0      GCCCGGGGTCGGGCTCAGCCGCCGCGCTCAAGGCGCTACGGCTCGTGCTCTTTGCCGCTG 120
consensus_3605#1      GTGTGCTGCTGGTCGCGACGGGCGCG-----GCGGCAGCGGCCGGTG---------ACTA 105
                      *   *  *  ** * *  * * ****     *  **  ****  ***          ** 

consensus_3605#0      CCATGGCCGCAGCGCGTGCAGCCGTGGACGAACCGTCGCTGCGGTGGACGTCACCAACCG 180
consensus_3605#1      C-GTGGTGGTGGCG-ACGAACCAGCGCGTGCGTTGCC-CCACGTCGGGCCTCGTCCACGC 162
                      *  ***  *  ***   * * * * *   *    * * *  **  ** * **  * **  

consensus_3605#0      GTAACCGTTACGACCTGAACGGGTTGGCGGACCCGGCGCTGAGCCCTGCGGTGAGCACAT 240
consensus_3605#1      GGAGATGG-------TGGATGAGCTGCCGACCGCGACG--GAGTTG-GCGGCGGAGGCGC 212
                      * *   *        ** * * * ** **  * ** **  ***    **** *    *  

consensus_3605#0      GGACGCAGCCAACGCGATGGCCCAATTT---GGACGGGCTCATGAACGTCGTCGCGTACG 297
consensus_3605#1      AGGTGAAC---GTGCATTCGCTCGACTCCGCGAATGGTATCGTGA----CGTCGCATTCG 265
                       *  * *      **  * ** * * *    * * **  ** ***    ****** * **

consensus_3605#0      ACGTCGGTCGCGGCGC--CATGCGCTTTCGGTTGGGGCCACTGGGATTG-GCCGGCGCCG 354
consensus_3605#1      GTGGACTCTGCGGAGCTGCATCCGCTGCGCAATGGCGTGGCCACTACCGTGTTCGCGTCG 325
                        *      **** **  *** ****      *** *   *    *  * *   *** **

consensus_3605#0      GTGACGAC---GCACGCTGTGATGCGATGTTGTGCGTTTACCCGCGCACTAACCCCAAAC 411
consensus_3605#1      GCGCCGATTCTGTCCGCCGAAGCGCAGGCCGAAGCGGACACGCGCGCGCAGGAGCCAGGG 385
                      * * ***    *  *** *    **        ***   ** ***** *     ***   

consensus_3605#0      TCCGTGCTTTGCCTCTGTCGGCCAACGCCACGACCGCGTATGTGGAGGACCCGGCCGTCG 471
consensus_3605#1      TT-GTTCACACCCGACGCGGTGCAGAGCGACGGGC-------TGGCGCACTCGGCGTATG 437
                      *  ** *    **   *  *  **  ** ***  *       *** * ** ****    *

consensus_3605#0      TCGCGCTGCCGGCGGGCGGTGCGCGCCCATGGTCGATGGCGCCGCGTCCGCTGGTGCTGT 531
consensus_3605#1      TGGAGGT---GGAGGAGGGCGTGCAGCTGCTGACGGAGACCGAGCGCCTTGCGATGATGG 494
                      * * * *   ** **  ** * **  *    * **  * *   *** *    * ** ** 

consensus_3605#0      GGAACGCGTCGACACCGCCGGCGTTCACGGAGTCCGATGATCCGGAGTTGCGCTCTGTGA 591
consensus_3605#1      AGACCGCTGCGAACGCGCACACGCACGCGCAGGTCG--GAGTCGGCAGCGGCCCGCGCAA 552
                       ** ***  ***   ***   **  * ** **  **  **  ***    *  *   *  *

consensus_3605#0      CGCTCAGTTTCGCGCGAAACGCATCCGCTGCTGCCGGTACGTGTTGGACCGACGAGTGG- 650
consensus_3605#1      GTACCTGGTGCACGCGGGG---ATGAACAACGGCGGCAGCGTGTTGGCGCGCTTCGAGAA 609
                          * * * * ****      **   *  * ** *   ********  **    * *  

consensus_3605#0      GCCGACACCGGCGGCGCGCACGCGCTCGATCTACTCGTCGTTTGCGCTGACGATGCGTTC 710
consensus_3605#1      GCAGACCGCCGCGACCTGTCAG-----GAGCGGTGTGAGGGCGACGC--GCAGTGCGTCG 662
                      ** ***  * *** *  *   *     ** *     *  *    ***   *  *****  

consensus_3605#0      GCTTACGCGTACACACGCGAAATGCCGCCGCCGTTTCCCACACCCGACGACCTCTGGTGG 770
consensus_3605#1      GCTTCAGCGT---CGTCCGTAAC----CCGCAG------AAGCGCAAGGGCCTGTGTACG 709
                      ****  ****   *   ** **     **** *      *  * * * * *** **   *

consensus_3605#0      CAGTGGTATGTG-GACGGCCGACGC-GAATGGCGCAAGCGCTGTGACGCGTTCAACGCAA 828
consensus_3605#1      CTGCGGAGCACGTGGGGGTCGGCACTGGACAATCCGGATTTCGACTCGTATCAGGCGCAC 769
                      * * **     * *  ** ** * * * *     *       *   **  *    **** 

consensus_3605#0      CCGGAGAGCTGTACGGCGCCGATGTGAGCTTTGGTCTGATGAAGTCCTCCGGCGAAGCTG 888
consensus_3605#1      ---GACTACAGCGTCGCGCCGACGCCGTTTCAGGAC--ATTGAGACGCACGTGAAGACGG 824
                         **   * *    ******* *     *  ** *  **  ** *   **   *  * *

consensus_3605#0      ATTGTACCACTTCGCTGTTGGCCGTTGTGGTGTCGCCTTTGGGCTGTCCGAACCGGACCG 948
consensus_3605#1      CCATTCCCGGGCAGCAGCTGCTGGTTTTGGCG--GACTTCGCG-----CGCGTCAAGCCC 877
                          * **     ** * **   *** *** *  * *** * *     **   *   ** 

consensus_3605#0      TTGCGTCGGTGGCCGCTGCCCACACCGCACGCACGGGCCAGCCCGTTGCGCCACCCGCCG 1008
consensus_3605#1      GCGCGCAATCAGAAGACGGCGGAGCTGCTGGTCAGCGTCGACCA--CAACCAGCCCGACG 935
                        ***      *  *  * *    * **  *   * * *  **       *  **** **

consensus_3605#0      TCG-ACGGCTGTGCGCGGTACCACGCGTGTGGGCATGGTAGCACGTGCCGCGTCGACACG 1067
consensus_3605#1      CCGTGTGGACGAACGTGCCGTCGAAC-TACCGCGACGCCAACTCGTTCCGCGCACCGTCC 994
                       **   **  *  ** *    *   * *   *  * *  * * *** *****      * 

consensus_3605#0      ACGGCACCGCGCCACAGCGGCGCGTACAACTGCACGTGCAGTCCGCTGCTGCCGTTCGGT 1127
consensus_3605#1      GTTGCGG-GCGTCACGAACCCGCTCAAGTCGGCCGGTG-ACCACACCGTTCGCATCGATT 1052
                         **   *** ***     ***  *   * **  *** *   * * * *  * *    *

consensus_3605#0      GGGCGGAACTGCACGACGCTGTGGCATTGCGCGCGCGACTTTGCCGGTGTCGCGACGCAG 1187
consensus_3605#1      ACTCGCGCGCGTTTGAGACGCCCGC-TCAGATGGACGACCGCAGCGGCTGCCAGCAGCAG 1111
                         **     *   **  *    ** *     *  ****     ***   *  *  ****

consensus_3605#0      CGCTGTTCCGCGTCCGGTGCGTGCGATGCGGTGACGGGCGAGTGCCGGTGCGCGCCGGGC 1247
consensus_3605#1      CGCCTGACGGCCATTCCCTTCCCCATTGAGCTGTCGGCCACGCGC--GTGTTCGAC--GT 1167
                      ***    * **            *  ** * ** *** *  * **  ***  ** *  * 

consensus_3605#0      CGCACGCGCTTCGACTGCAGCGTCACAGCGGCAGCGCTGACGGACGCACAGGTGGAGGT- 1306
consensus_3605#1      CGT-CGGGCAGC-ACTGGAACCTGGCGCCTGCCTCCTCCATCACTGCGAAGAACTTCGTC 1225
                      **  ** **  * **** * * *  *  * **  *    *     **  **      ** 

consensus_3605#0      GACACACCACACGTCGCTCAGCCCTACG-CGTTTGCAGCTGCAGCTGTGCGAATG-GATG 1364
consensus_3605#1      GCCATCCCCGGGGGCGTTCCGGAGGGGGATGTGGAGGGCGACGGCGGTGCCAGCGCGGCG 1285
                      * **  **    * ** ** *      *  **     **  * ** **** *  * *  *

consensus_3605#0      GGTGTCGCGCGTGATGCGTGCAGCAGCGATGTGCTGCGGGTGGCTGTCCGGCCCG-GCCC 1423
consensus_3605#1      GGCGATGCGGGTTCGATGAGCATCAAACTCGCAGTGCCGGAGGACGGCGCGCGTGTGCTC 1345
                      ** *  *** **     * *** **     *   *** ** **  * *  **  * ** *

consensus_3605#0      GCGGTACACGACGGTGTCGGTTTGGGGC-CTCACAGCGGCTGCAATCGCGGCGTGTCCGT 1482
consensus_3605#1      GTGTTCGCCGACATCTCGCGCGTGCAGCACTCGCA-CGGATGGACGAACTCCGTCTTCCG 1404
                      * * *   ****       *  **  ** *** ** *** ** *    *  *** * *  

consensus_3605#0      TTGCACTGCTCACTCTCGAAACGCTCGCCGCCACGGCCGACGCCGAACACATGACGGCAG 1542
consensus_3605#1      CATTACCGTCGACAATCAGGA-AATCGCATTCACCAACACCGGTGAGCAC--TACGGTTT 1461
                          ** *   **  **   *   ****   ***   *  **  ** ***   ****   

consensus_3605#0      CCGGTGTGGCCGCCATCCGCCTTGGCGTGGCGCAGCCGTGGATATGGGTGGACCTAACGG 1602
consensus_3605#1      CCAGTACCGC-GCCATTGCACT--GCGCGGCGCTTCGGGCAGTCTGAAGAAGGGAGAGCA 1518
                      ** **   ** *****    **  *** *****  * *    * **          *   

consensus_3605#0      TGCAGTCACAGTGCAGCGCATCGTCCGGTGCTCCGGGCGGCGCGGAGTGCGCCCAAACGG 1662
consensus_3605#1      CACGATCGCGGTACAGGCCAAGACGCAGCGCGGCAAACTGTTCTT--TATCTCTGACGGT 1576
                        *  ** * ** ***  **     * * **  *   * *  *    *    *  *  * 

consensus_3605#0      ATTGGTTTCAGAGTCGCGGTACTGCGAACGCGAACACAAATGACATACCCGCCGATCTGG 1722
consensus_3605#1      AACGGGTTCC-AGCAGCGGCGC--CTGACGGCACTGGTCGTGCCGAAG--GGCAATCTGT 1631
                      *  ** ***  **  ****  *  *  ***  *       ** *  *   * * ***** 

consensus_3605#0      CGGTCATGTGGGCACTGCTGGTCGCGGCGGTGCTGCTAACCACCGGCTTTGTGGTGCTGC 1782
consensus_3605#1      GGAACAAGAAGTGAAACCTCAGCACGGCGTGGCTCAAGCCCTCGAAGTGGGCGGAGCTGC 1691
                       *  ** *  *  *   **   * *****  ***     ** *    *  * ** *****

consensus_3605#0      GCTGGCGCTGGGCCATGAGCGGTGCGCTGTTG---GAGCGCTGGCGGCAGTCGCGCACGT 1839
consensus_3605#1      -CGGGCGC--GCCCATGCGCCTCACAGTGACGACGGAGCAGATGGGGCAGCTGCTCG--- 1745
                       * *****  * ***** **    *  **  *   ****    * *****  ** *    

consensus_3605#0      TCAGCGCCGCCAACGCCGAAGCGCATGCCCGGCATCACGCGCAGTTGCAACAGCCGCAAC 1899
consensus_3605#1      TCACCGTCGGCATCAGCCGCGTGCAGTCGTGGGGTAACG-GCAACGTCG--AGCTGCGGC 1802
                      *** ** ** ** *  *   * ***  *  **  * *** ***    *   *** **  *

consensus_3605#0      AGCAACCGCAAGCCGCCATAGCCATCGTACAAGCGTCAGGGCCTGAGCAACCGGTGCCGC 1959
consensus_3605#1      TGGTGGTGAGCGGCGAAAAGGACGACGTCGCAG----AGGGCGAGGGCTACGAG-ATCGC 1857
                       *     *   * **  *  * *  ***   **    *****  * ** **  *   ***

consensus_3605#0      CCGCAGCGCCAGCACCAGCGCCAGTGCTCGTGTCCGTACCGCCACCGGCCGTTGTGCCCT 2019
consensus_3605#1      GCGTACGAACACGGGCAACGTCAATGG--GTGGCGCTATCAGGACGTGTCGTTCCACGCC 1915
                       ** *    **    ** ** ** **   *** *  ** *   **  * ****   * * 

consensus_3605#0      GTGAGCCGCCGCCGATGTGGGCGTTCACCCGTTTTGTAC-CGCCCGCCGCCGCAGCGTAC 2078
consensus_3605#1      GTCA--CGCCGCTGCTGACGCCGGGCACCCACACAGTGCGCGTTCAGGTGCGCAGCAAAT 1973
                      ** *  ****** * **  * **  *****     ** * **  *     ******  * 

consensus_3605#0      CTGCAGTCGGCGCCGCGCGCTGTGGTTGTGGTGAACGAAGACGAACGCGGCGAATGGTAC 2138
consensus_3605#1      CGGGCTCAACGGTCGTGTTTTATAACGACGGCAATGGCATGCAGCAGCGCCGCCT--CTC 2031
                      * *        * ** *   * *      **  *  * *  *    *** **  *    *

consensus_3605#0      GAATAAGCTCAC-TCGCCGCAGAGACTCCTTTAGTTTCGTGTTTGCGTCTCAGTGCTGTA 2197
consensus_3605#1      AGCCGTGCTCATACCGCCGTCGGCCGGGC------------------------------- 2060
                            *****   *****  *      *                               

consensus_3605#0      TTTTTCAATATCATCTGTCTGTCATGTTCTGTCTGTTTGTAGTTCACGCGCGAGCGCACA 2257
consensus_3605#1      ------------------------------------------------------------
                                                                                  

consensus_3605#0      GTTTCGATCCGCCGCTCAACTCAGCCA 2284
consensus_3605#1      ---------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)