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Oryza sativa
cluster # 3639 cluster # 3639       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3639#0 length = 755 sequences # 2  

consensusID : consensus_3639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 755
fasta sequence
                              [AACCAAGGCCTACAACACAACACCGATCATTAATCTCAAATCATTCATGTCTCCATTCCACATACTTGCTGTTCTACCATGGCTCTCCACAGCGGTATCGGCAGGTGATCTGCCGCCCAACTGTGAGAGAAGTTGCGGTGGCGTAGAGATCCCTTACCCGTTTGGCCTAGACCCTGCCTGCGCCTTGCCCGGCTTCAACCTCACCTGCAACACTACAGGAGATGGCAAGCCGTATCACCATGATGTGGAGGTTCTCAACATCTCGCTGCTAGGAGGTCAAGTTCGGATGAGGATGGACATCTCCTCTTATTGCTACAACAGTACTACTGATGAGATAAGCGAAATAGACTGGAAGCTGAACTTAGCGAACACACCATACAGATTCTCTGACTCCGGGAACAAGTTCACGGCCATTGGGTGCCGAACGCTCGCTTACATTGATGCAGTTGGCTTGCTAACCACTGGGTGTGTGGCCACATGCCAGGAAGACGACCTCAAGACACTCATAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCAGACAGCCATCCCCAAAGGTCTACAGTACTACAAGGTCTCGTTTGACTCAGGCTTCAATACAACTGAGATCTACAACATGAGCCGTTGCAGCTATGCAGCACTCATAGAGTCATCCAGCTTCAACTTCTCCAAGAACTACTCTACTTCTTCATCGTTCAATGATCATTATGGTGGACAGGCTCCGCTGCTCGTGGATTGNGCCATCGGTAACGAGA]

[+] EMBL CB627931             [AACCAAGGCCTACAACACAACACCGATCATTAATCTCAAATCATTCATGTCTCCATTCCACATACTTGCTGTTCTACCATGGCTCTCCACAGCGGTATCGGCAGGTGATCTGCCGCCCAACTGTGAGAGAAGTTGCGGTGGCGTAGAGATCCCTTACCCGTTTGGCCTAGACCCTGCCTGCGCCTTGCCCGGCTTCAACCTCACCTGCAACACTACAGGAGATGGCAAGCCGTATCACCATGATGTGGAGGTTCTCAACATCTCGCTGCTAGGAGGTCAAGTTCGGATGAGGATGGACATCTCCTCTTATTGCTACAACAGTACTACTGATGAGATAAGCGAAATAGACTGGAAGCTGAACTTAGCGAACACACCATACAGATTCTCTGACTCCGGGAACAAGTTCACGGCCATTGGGTGCCGAACGCTCGCTTACATTGATGCAGTTGGCTTGCTAACCACTGGGTGTGTGGCCACATGCCAGGAAGACGACCTCAAGACACTCATAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCAGACAGCCATCCCCAAAGGTCTACAGTACTACAAGGTCTCGTTTGACTCAGGCTTCAATACAACTGAGATCTACAACATGAGCCGTTGCAGCTATGCAGCACTCATAGAGTCATCCAGCTTCAACTTCTCCAAGAACTACTCTACTTCTTCATCGTTCAATGATCATTATGGTGGACAGGCTCCGCTGCTCGTGGATTGNGCCATCGGTAACGAGA]
[+] EMBL CB629682             [      GGCCTCCAACACAACACCGATCATTAATCTCAAATCATTCATGTCTCCATTCCACATACTTGCTGTTCTACCATGGCTCTCCACAGCGGTATCGGCAGGTGATCTGCCGCCCAACTGTGAGAGAAGTTGCGGTGGCGTAGAGATCCCTTACCCGTTTGGCCTAGACCCTGCCTGCGCCTTGCCCGGCTTCAACCTCACCTGCAACACTACAGGAGATGGCAAGCCGTATCACCATGATGTGGAGGTTCTCAACATCTCGCTGCTAGGAGGTCAAGTTCGGATGAGGATGGACATCTCCTCTTATTGCTACAACAGTACTACTGATGAGATAAGCGAAATAGACTGGAAGCTGAACTTAGCGAACACACCATACAGATTCTCTGACTCCGGGAACAAGTTCACGGCCATTGGGTGCCGAACGCTCGCTTACATTGATGCAGTTGGCTTGCTAACCACTGGGTGTGTGGCCACATGCCAGGAAGACGACCTCAAGACACTCATAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCAGACAGCCATCCCCAAAGGTCTACAGTACTACAAGGTCTCGTTTGACTCAGGCTTCAATACAACTGAGATCTACAACATGAGCCGTTGCAGCTATGCAGCACTCATAGAGTCATCCAGCTTCAACTTCTCCAAGAACTACTCTACTTCTTCATCGTTCAATGATCATTATGGTGGACAGGCTCCGCTGCTCGTGGATTGGGCCATCGGTAACGAGA]


>consensus_3639#0 AACCAAGGCCTACAACACAACACCGATCATTAATCTCAAATCATTCATGTCTCCATTCCA CATACTTGCTGTTCTACCATGGCTCTCCACAGCGGTATCGGCAGGTGATCTGCCGCCCAA CTGTGAGAGAAGTTGCGGTGGCGTAGAGATCCCTTACCCGTTTGGCCTAGACCCTGCCTG CGCCTTGCCCGGCTTCAACCTCACCTGCAACACTACAGGAGATGGCAAGCCGTATCACCA TGATGTGGAGGTTCTCAACATCTCGCTGCTAGGAGGTCAAGTTCGGATGAGGATGGACAT CTCCTCTTATTGCTACAACAGTACTACTGATGAGATAAGCGAAATAGACTGGAAGCTGAA CTTAGCGAACACACCATACAGATTCTCTGACTCCGGGAACAAGTTCACGGCCATTGGGTG CCGAACGCTCGCTTACATTGATGCAGTTGGCTTGCTAACCACTGGGTGTGTGGCCACATG CCAGGAAGACGACCTCAAGACACTCATAGACGGTGTCTGCTCCGGGATAGGTTGCTGCCA GACAGCCATCCCCAAAGGTCTACAGTACTACAAGGTCTCGTTTGACTCAGGCTTCAATAC AACTGAGATCTACAACATGAGCCGTTGCAGCTATGCAGCACTCATAGAGTCATCCAGCTT CAACTTCTCCAAGAACTACTCTACTTCTTCATCGTTCAATGATCATTATGGTGGACAGGC TCCGCTGCTCGTGGATTGNGCCATCGGTAACGAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)