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Oryza sativa
cluster # 3644 cluster # 3644       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3644#0 length = 1204 sequences # 2  

consensusID : consensus_3644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1204
fasta sequence
                              [GTGTTTGTTGACTACTAGTATGGCGGGAAAGGAGCGGAGCCACGTGCACTTGTGCCTCACCGACTACAGGGACGGCACCTACACCTACACGGTGCACCACATCGACGTCGCCCCCTTCTTCCTCCGCTCCGACGACCCCGACGTCCCAGACCCGGGAGCCATGGAGGAGGCTGTCCTGCCCCCACCCGCCACGCGCCTCGCCACGCGCCCGGAGACCAACGGCCTCGAGTTCCACCACCTCCTCCGCGCCGCCGACGGAGGCGACATGATCGTGGCCACCGACGACCAGCGCCGCACCCTCATCTACGACGTCGCCGCCCGCGCCGTCGGCCCGGGGCACATGCTGCTCTCCGACAAGCGCGTCCCGGTCTCCGCCGCCGTCGCCGACCGCCTCTACGTCCTCGACACCTCGCACGCCGCCCGGCGCGCCACCTGCTTCGAGGCCCTCGTGTACGACGGCGTCGAGGACCCGCTGCGCGCCGACTGGTACTGGCGCCGCCTCCCGGGCCCTCCCTACGCCGACGACGGCATCGGCCGCCCTCTCCCCGGCTCCCGTGTCACCGCCCTCGCGGTGGTCGGCGCAGGCATCTGGACCACGACGGCGCCGGCGGAGGACGGCGTCGCCTCCGTCCGCCCCTGCTCCCGGCTCGACCCCAGGCGCGGCGTCTGGACGACGCCCAAGGGCGCCGGCGCCGGCCCCGGCACCTACTCGTTCGACACCGAGCGGCAAGCCTGGAGGAGAGAGGGCGACTGGGAGCTGCCGTTCGCCGGCAAGGCCGAGCTCGTCCCGGGCTGCAACCTGTGGTTCGGCTTCTCCCGCGCCGACGGGTCGTCGTCGCTCTGCGCCGCCGACCTCGCCGCGGCGCCGCACAGGGCGTGCGGTGTGTGGGAGGACTTCCGCCCGCCCAAGGAGTGGTTCAGCTGCGGCCGCCACCTCGTCAGCCTCGGCTCCGGCAAGCTCTGCGTCGTCAGGTTCTTCGCCACCGACCCCCTCGACAAATGGAGGCGTAGGGACCCTGTCGCCATCATCACCGCCATGGAGGTGCGGACTATGCCTGCTTGCGACGGCGACGACGACGGCGGAAGAGGAGGAGAACGGCGGATCAAGGTGGTGAAGCACATGTCTAGGTGTATCAAGCTCCCAAATTACAATAAAGGCAGAAATTGGGTCCTCTAATACTCGTTAAATTTCACTCTAAAATGC]

[+] EMBL AK106433             [GTGTTTGTTGACTACTAGTATGGCGGGAAAGGAGCGGAGCCACGTGCACTTGTGCCTCACCGACTACAGGGACGGCACCTACACCTACACGGTGCACCACATCGACGTCGCCCCCTTCTTCCTCCGCTCCGACGACCCCGACGTCCCAGACCCGGGAGCCATGGAGGAGGCTGTCCTGCCCCCACCCGCCACGCGCCTCGCCACGCGCCCGGAGACCAACGGCCTCGAGTTCCACCACCTCCTCCGCGCCGCCGACGGAGGCGACATGATCGTGGCCACCGACGACCAGCGCCGCACCCTCATCTACGACGTCGCCGCCCGCGCCGTCGGCCCGGGGCACATGCTGCTCTCCGACAAGCGCGTCCCGGTCTCCGCCGCCGTCGCCGACCGCCTCTACGTCCTCGACACCTCGCACGCCGCCCGGCGCGCCACCTGCTTCGAGGCCCTCGTGTACGACGGCGTCGAGGACCCGCTGCGCGCCGACTGGTACTGGCGCCGCCTCCCGGGCCCTCCCTACGCCGACGACGGCATCGGCCGCCCTCTCCCCGGCTCCCGTGTCACCGCCCTCGCGGTGGTCGGCGCAGGCATCTGGACCACGACGGCGCCGGCGGAGGACGGCGTCGCCTCCGTCCGCCCCTGCTCCCGGCTCGACCCCAGGCGCGGCGTCTGGACGACGCCCAAGGGCGCCGGCGCCGGCCCCGGCACCTACTCGTTCGACACCGAGCGGCAAGCCTGGAGGAGAGAGGGCGACTGGGAGCTGCCGTTCGCCGGCAAGGCCGAGCTCGTCCCGGGCTGCAACCTGTGGTTCGGCTTCTCCCGCGCCGACGGGTCGTCGTCGCTCTGCGCCGCCGACCTCGCCGCGGCGCCGCACAGGGCGTGCGGTGTGTGGGAGGACTTCCGCCCGCCCAAGGAGTGGTTCAGCTGCGGCCGCCACCTCGTCAGCCTCGGCTCCGGCAAGCTCTGCGTCGTCAGGTTCTTCGCCACCGACCCCCTCGACAAATGGAGGCGTAGGGACCCTGTCGCCATCATCACCGCCATGGAGGTGCGGACTATGCCTGCTTGCGACGGCGACGACGACGGCGGAAGAGGAGGAGAACGGCGGATCAAGGTGGTGAAGCACATGTCTAGGTGTATCAAGCTCCCAAATTACAATAAAGGCAGAAATTGGGTCCTCTAATACTCGTTAAATTTCACTCTAAAATGC]
[+] EMBL D43120               [                           AAAGGNGCGGA CCACGTGCACTTNT NCTCACCGACTACAGGGACGGCACCTACACCTACACGGTGCACCACATCGACGTCGCCCCCTTNTTCCTCCGCTCCGACGACCCCGACGTNCCGGNCCCGGGAGCCATGGAGGAGGCTGTTCTGCCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_3644#0 GTGTTTGTTGACTACTAGTATGGCGGGAAAGGAGCGGAGCCACGTGCACTTGTGCCTCAC CGACTACAGGGACGGCACCTACACCTACACGGTGCACCACATCGACGTCGCCCCCTTCTT CCTCCGCTCCGACGACCCCGACGTCCCAGACCCGGGAGCCATGGAGGAGGCTGTCCTGCC CCCACCCGCCACGCGCCTCGCCACGCGCCCGGAGACCAACGGCCTCGAGTTCCACCACCT CCTCCGCGCCGCCGACGGAGGCGACATGATCGTGGCCACCGACGACCAGCGCCGCACCCT CATCTACGACGTCGCCGCCCGCGCCGTCGGCCCGGGGCACATGCTGCTCTCCGACAAGCG CGTCCCGGTCTCCGCCGCCGTCGCCGACCGCCTCTACGTCCTCGACACCTCGCACGCCGC CCGGCGCGCCACCTGCTTCGAGGCCCTCGTGTACGACGGCGTCGAGGACCCGCTGCGCGC CGACTGGTACTGGCGCCGCCTCCCGGGCCCTCCCTACGCCGACGACGGCATCGGCCGCCC TCTCCCCGGCTCCCGTGTCACCGCCCTCGCGGTGGTCGGCGCAGGCATCTGGACCACGAC GGCGCCGGCGGAGGACGGCGTCGCCTCCGTCCGCCCCTGCTCCCGGCTCGACCCCAGGCG CGGCGTCTGGACGACGCCCAAGGGCGCCGGCGCCGGCCCCGGCACCTACTCGTTCGACAC CGAGCGGCAAGCCTGGAGGAGAGAGGGCGACTGGGAGCTGCCGTTCGCCGGCAAGGCCGA GCTCGTCCCGGGCTGCAACCTGTGGTTCGGCTTCTCCCGCGCCGACGGGTCGTCGTCGCT CTGCGCCGCCGACCTCGCCGCGGCGCCGCACAGGGCGTGCGGTGTGTGGGAGGACTTCCG CCCGCCCAAGGAGTGGTTCAGCTGCGGCCGCCACCTCGTCAGCCTCGGCTCCGGCAAGCT CTGCGTCGTCAGGTTCTTCGCCACCGACCCCCTCGACAAATGGAGGCGTAGGGACCCTGT CGCCATCATCACCGCCATGGAGGTGCGGACTATGCCTGCTTGCGACGGCGACGACGACGG CGGAAGAGGAGGAGAACGGCGGATCAAGGTGGTGAAGCACATGTCTAGGTGTATCAAGCT CCCAAATTACAATAAAGGCAGAAATTGGGTCCTCTAATACTCGTTAAATTTCACTCTAAA ATGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)