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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3675 cluster # 3675       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3675#0 length = 801 sequences # 2  

consensusID : consensus_3675#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 801
fasta sequence
                              [CTTCACCCGCGGGTTCCCGCGCCGATCTCCATCATCGGGAGCGGCGGCGCCGACGGCGTCCACCGCATACTCTCGCCTCTGAATCTTTGCGCCCAAGTCGATCTACCCGTTCCCTCGGCCTCAACTCCCATCTCCTGCGAGTTCGTCGCCGCCTCCGCCGATCTCCATCAGGCGAGCAGCGGTGCCGTCGTCGTGCTGCTTCCGCCTCCGCCCTCCGTGCTGAGAAGATGCGGAGCGGTCGTTATGATCTCAGAAGTAACTTGAAGAGGGATGAAAAAACTGATTTTGTCATGACGTATTCAAAGAAGCATAGAATAAAGGAGGACATAGTTTGCAATGAAGGAGAGATAGCTGAGTCCTTGGTTTCAGGTGACTTGCCCTGCGAATCGAATCAAGGTGTCTTCTGGAGTGAGCTCAGTGGAGAAGTTGCATCTAATCTGTCCAAAAGTGTTGTTTCACTTGCCCTGCACGATGGAAACACAATGTTATTTGTATGCTCGGGCATAGCTGTACACCGTAATGGACATGTTATAAAATTGCTGACCTCAGCAAGCTTGCTTAAAGCTTTTAATGACGCAAGAAAAGATCATGATAACTTGAAGGTTGAAGTGCACCATGAAGACACTGTTGTCATAGGGTTTTTGAGAGAATATAATTTAGATCACAACATGGCTGCTGTCATTGTGGAGAACTTACCTGATCTTCGTCCTGTGCCTTTNCACAATGTTCAGAAATTTGTACCGCATAGCAAGGTAGTAGCTCTAGGCCGTGATATCTCTGGCAAATTAATGACCACAAGTG]

[+] EMBL CB631987             [CTTCACCCGCGGGTTCCCGCGCCGATCTCCATCATCGGGAGCGGCGGCGCCGACGGCGTCCACCGCATACTCTCGCCTCTGAATCTTTGCGCCCAAGTCGATCTACCCGTTCCCTCGGCCTCAACTCCCATCTCCTGCGAGTTCGTCGCCGCCTCCGCCGATCTCCATCAGGCGAGCAGCGGTGCCGTCGTCGTGCTGCTTCCGCCTCCGCCCTCCGTGCTGAGAAGATGCGGAGCGGTCGTTATGATCTCAGAAGTAACTTGAAGAGGGATGAAAAAACTGATTTTGTCATGACGTATTCAAAGAAGCATAGAATAAAGGAGGACATAGTTTGCAATGAAGGAGAGATAGCTGAGTCCTTGGTTTCAGGTGACTTGCCCTGCGAATCGAATCAAGGTGTCTTCTGGAGTGAGCTCAGTGGAGAAGTTGCATCTAATCTGTCCAAAAGTGTTGTTTCACTTGCCCTGCACGATGGAAACACAATGTTATTTGTATGCTCGGGCATAGCTGTACACCGTAATGGACATGTTATAAAATTGCTGACCTCAGCAAGCTTGCTTAAAGCTTTTAATGACGCAAGAAAAGATCATGATAACTTGAAGGTTGAAGTGCACCATGAAGACACTGTTGTCATAGGGTTTTTGAGAGAATATAATTTAGATCACAACATGGCTGCTGTCATTGTGGAGAACTTACCTGATCTTCGTCCTGTGCCTTTNCACAATGTTCAGAAATTTGTACCGCATAGCAAGGTAGTAGCTCTAGGCCGTGATATCTCTGGCAAATTAATGACCACAAGTG]
[+] EMBL CB629051             [                                              gagggGACGGCGCCCACCCTTTAATCTCGCCTCTGAATCTTTGCGCCCAAGTCGATCTACCCGTTCCCTCGGCCTCAACTCCCATCTCCTGCAAGTTCGTCGCCGCCTCCGCCGATCTCCATTAGGCGAGCAGCGGTGCCGTCGTCGTGCTGCTTCCGCCTCCGCCCTCCGTGCTGATAAGATGCGGAGCGGTCGATATGATCTCAGAAGTAACTTGAAGAGGGATGAAAAAACTGATTTTGTCATGACGTATTCAAAGAAGCATAAAATAAAGGAGGACATAGTTTGCAATGAAGGAGAGATAGCTGAGTCCTTGGTTTCAGGTGACTTGTCCTGCGAATCGAATCAAGGTGGCTTCTGGAGTGAGCTCAGTGGAGAAGTTGCATCTAATCTGTCCAAAAGTGTTGTTTCACTTGCCCTGCACGATGGAAACACAATGTTATTTGTATGCTCGGGCATAGCTGTACACCGGAATGGACATGTTATAAAATTGCTGACCTCAGCAAGCTTGCTTAAAGCTTTTAATGACGCAAGAAAAGATCATGATAACTTGAAGGTTGAAGTGCACCATGAAGACACTGTTGTCATAGGGTTTTTGAGAGAATATAATTTAGATCACAACATGGC                                                                                                                                ]


>consensus_3675#0 CTTCACCCGCGGGTTCCCGCGCCGATCTCCATCATCGGGAGCGGCGGCGCCGACGGCGTC CACCGCATACTCTCGCCTCTGAATCTTTGCGCCCAAGTCGATCTACCCGTTCCCTCGGCC TCAACTCCCATCTCCTGCGAGTTCGTCGCCGCCTCCGCCGATCTCCATCAGGCGAGCAGC GGTGCCGTCGTCGTGCTGCTTCCGCCTCCGCCCTCCGTGCTGAGAAGATGCGGAGCGGTC GTTATGATCTCAGAAGTAACTTGAAGAGGGATGAAAAAACTGATTTTGTCATGACGTATT CAAAGAAGCATAGAATAAAGGAGGACATAGTTTGCAATGAAGGAGAGATAGCTGAGTCCT TGGTTTCAGGTGACTTGCCCTGCGAATCGAATCAAGGTGTCTTCTGGAGTGAGCTCAGTG GAGAAGTTGCATCTAATCTGTCCAAAAGTGTTGTTTCACTTGCCCTGCACGATGGAAACA CAATGTTATTTGTATGCTCGGGCATAGCTGTACACCGTAATGGACATGTTATAAAATTGC TGACCTCAGCAAGCTTGCTTAAAGCTTTTAATGACGCAAGAAAAGATCATGATAACTTGA AGGTTGAAGTGCACCATGAAGACACTGTTGTCATAGGGTTTTTGAGAGAATATAATTTAG ATCACAACATGGCTGCTGTCATTGTGGAGAACTTACCTGATCTTCGTCCTGTGCCTTTNC ACAATGTTCAGAAATTTGTACCGCATAGCAAGGTAGTAGCTCTAGGCCGTGATATCTCTG GCAAATTAATGACCACAAGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)