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Oryza sativa
cluster # 369 cluster # 369       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_369#0 length = 1217 sequences # 2  

consensusID : consensus_369#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1217
fasta sequence
                              [ACAAGGGAGGAGAGCCGGCAGCAAGAGCAGCTGTGCGCCATGGTGGAGGCCCCGTCGCGTTCAAGGACGCTGTCGACGTCGACGCCACGCCGGTGCGCCCTCCGACGGAGCTCGCCGCCGCCGTCTCCGCCCTGCCGGCGGGCGTCTCCTACGGCCAGCCGATGCGCTGCTACGGGGGGACCTGGGTGTTCGAGAGCTGGGCGCAGGGCGTGGTCGCCATGCACCGCGGCGGCCTCGTGCCCCGCGCCGGCGACGTCCTCCTCGCCAGCCTCCCCAAGTCGGGGACGACGTGGCTCAAGGCACTCGCGTTCGCCACCATGGCGCGCCGCGCGTGCCCGCCGCCGGCGAGCCCCGACCACCCGCTCCGCCGCCTCAACCCGCACGACTGCGTGCCCCTCCTCGACAGGCTCTTCGCCGCCGGCCGCGACGCGCTTCTCGACGAGCTGCCGTCGCCGAGGCTCATGTGCACGCACATGCCGCTCTCGCTGCTGCCGCCGGCGGTGGCTGACGGCAACTCCAACACCAAGATCATCTACATTTGCAGGGACCAGAAAGATAGATTGGTCTCCATCTGGCACTTTCGGAAACGCAATGTGCCAGATCTGTTGCTCCAAGAAGTGTATGAGTCTATATGTGATGGCACTGGGTTTGCTGGTCCTGTCTGGGATCACTTGCTTGGTTACTGGAGGGCAAGCAAAATAGATCTAGGCCGAGTGCTCTTCTTGAAATATGAGGAGGTGCTTCGAGACCCAGTGAACACCGTTAGAGAGCTCGCACAATTTGTCGGGCAGCCATTCTCTGACACAGAGGAAGAAGCTGGCATTGTTGCGGAGATCGTCAAGCTATGTAGCCTAGAGAGTCTAAGGAGCCAGAAAGCCAACAAAGAAGGCATACAAGGTGTGTACATCAAGTTCTCGCACGACTCGTATTTTAGGAAGGGGGTGGAAGGGGACTGGAGGAACCACATGACTCCTAAGATGGGCGAACATCTGGATTCGATTATGCGAGAAAAGTTTGATGGATCGGGGCTCACCATATGATGCGCCATTATGGCCGGGGTTTCATCTTTTAATTTGTAGTCACAGTTTTCAAGCTATGTGTTTCATAATAAAACAAAGCCTCCTAGCCTGTTTGGAGGCTTAACTTTAACTGTTTATGCTTATAAACAGGTACATCTATGACCTATGTAATTTTCGGTGCACCAAATAAAATCCTTC]

[+] EMBL AK099021             [ACAAGGGAGGAGAGCCGGCAGCAAGAGCAGCTGTGCGCCATGGTGGAGGCCCCGTCGCGTTCAAGGACGCTGTCGACGTCGACGCCACGCCGGTGCGCCCTCCGACGGAGCTCGCCGCCGCCGTCTCCGCCCTGCCGGCGGGCGTCTCCTACGGCCAGCCGATGCGCTGCTACGGGGGGACCTGGGTGTTCGAGAGCTGGGCGCAGGGCGTGGTCGCCATGCACCGCGGCGGCCTCGTGCCCCGCGCCGGCGACGTCCTCCTCGCCAGCCTCCCCAAGTCGGGGACGACGTGGCTCAAGGCACTCGCGTTCGCCACCATGGCGCGCCGCGCGTGCCCGCCGCCGGCGAGCCCCGACCACCCGCTCCGCCGCCTCAACCCGCACGACTGCGTGCCCCTCCTCGACAGGCTCTTCGCCGCCGGCCGCGACGCGCTTCTCGACGAGCTGCCGTCGCCGAGGCTCATGTGCACGCACATGCCGCTCTCGCTGCTGCCGCCGGCGGTGGCTGACGGCAACTCCAACACCAAGATCATCTACATTTGCAGGGACCAGAAAGATAGATTGGTCTCCATCTGGCACTTTCGGAAACGCAATGTGCCAGATCTGTTGCTCCAAGAAGTGTATGAGTCTATATGTGATGGCACTGGGTTTGCTGGTCCTGTCTGGGATCACTTGCTTGGTTACTGGAGGGCAAGCAAAATAGATCTAGGCCGAGTGCTCTTCTTGAAATATGAGGAGGTGCTTCGAGACCCAGTGAACACCGTTAGAGAGCTCGCACAATTTGTCGGGCAGCCATTCTCTGACACAGAGGAAGAAGCTGGCATTGTTGCGGAGATCGTCAAGCTATGTAGCCTAGAGAGTCTAAGGAGCCAGAAAGCCAACAAAGAAGGCATACAAGGTGTGTACATCAAGTTCTCGCACGACTCGTATTTTAGGAAGGGGGTGGAAGGGGACTGGAGGAACCACATGACTCCTAAGATGGGCGAACATCTGGATTCGATTATGCGAGAAAAGTTTGATGGATCGGGGCTCACCATATGATGCGCCATTATGGCCGGGGTTTCATCTTTTAATTTGTAGTCACAGTTTTCAAGCTATGTGTTTCATAATAAAACAAAGCCTCCTAGCCTGTTTGGAGGCTTAACTTTAACTGTTTATGCTTATAAACAGGTACATCTATGACCTATGTAA                           ]
[+] EMBL AK061204             [  AAGGGAGGAGAGCCGGCAGCAAGAGCAGCTGTGCGCCATGGTGGAGGCCCCGTCGCGTTCAAGGACGCTGTCGACGTCGACGCCACGCCGGTGCGCCCTCCGACGGAGCTCGCCGCCGCCGTCTCCGCCCTGCCGGCGGGCGTCTCCTACGGCCAGCCGATGCGCTGCTACGGGGGGACCTGGGTGTTCGAGAGCTGGGCGCAGGGCGTGGTCGCCATGCACCGCGGCGGCCTCGTGCCCCGCGCCGGCGACGTCCTCCTCGCCAGCCTCCCCAAGTCGGGGACGACGTGGCTCAAGGCACTCGCGTTCGCCACCATGGCGCGCCGCGCGTGCCCGCCGCCGGCGAGCCCCGACCACCCGCTCCGCCGCCTCAACCCGCACGACTGCGTGCCCCTCCTCGACAGGCTCTTCGCCGCCGGCCGCGACGCGCTTCTCGACGAGCTGCCGTCGCCGAGGCTCATGTGCACGCACATGCCGCTCTCGCTGCTGCCGCCGGCGGTGGCTGACGGCAACTCCAACACCAAGATCATCTACATTTGCAGGGACCAGAAAGATAGATTGGTCTCCATCTGGCACTTTCGGAAACGCAATGTGCCAGATCTGTTGCTCCAAGAAGTGTATGAGTCTATATGTGATGGCACTGGGTTTGCTGGTCCTGTCTGGGATCACTTGCTTGGTTACTGGAGGGCAAGCAAAATAGATCTAGGCCGAGTGCTCTTCTTGAAATATGAGGAGGTGCTTCGAGACCCAGTGAACACCGTTAGAGAGCTCGCACAATTTGTCGGGCAGCCATTCTCTGACACAGAGGAAGAAGCTGGCATTGTTGCGGAGATCGTCAAGCTATGTAGCCTAGAGAGTCTAAGGAGCCAGAAAGCCAACAAAGAAGGCATACAAGGTGTGTACATCAAGTTCTCGCACGACTCGTATTTTAGGAAGGGGGTGGAAGGGGACTGGAGGAACCACATGACTCCTAAGATGGGCGAACATCTGGATTCGATTATGCGAGAAAAGTTTGATGGATCGGGGCTCACCATATGATGCGCCATTATGGCCGGGGTTTCATCTTTTAATTTGTAGTCACAGTTTTCAAGCTATGTGTTTCATAATAAAACAAAGCCTCCTAGCCTGTTTGGAGGCTTAACTTTAACTGTTTATGCTTATAAACAGGTACATCTATGACCTATGTAATTTTCGGTGCACCAAATAAAATCCTTC]


>consensus_369#0 ACAAGGGAGGAGAGCCGGCAGCAAGAGCAGCTGTGCGCCATGGTGGAGGCCCCGTCGCGT TCAAGGACGCTGTCGACGTCGACGCCACGCCGGTGCGCCCTCCGACGGAGCTCGCCGCCG CCGTCTCCGCCCTGCCGGCGGGCGTCTCCTACGGCCAGCCGATGCGCTGCTACGGGGGGA CCTGGGTGTTCGAGAGCTGGGCGCAGGGCGTGGTCGCCATGCACCGCGGCGGCCTCGTGC CCCGCGCCGGCGACGTCCTCCTCGCCAGCCTCCCCAAGTCGGGGACGACGTGGCTCAAGG CACTCGCGTTCGCCACCATGGCGCGCCGCGCGTGCCCGCCGCCGGCGAGCCCCGACCACC CGCTCCGCCGCCTCAACCCGCACGACTGCGTGCCCCTCCTCGACAGGCTCTTCGCCGCCG GCCGCGACGCGCTTCTCGACGAGCTGCCGTCGCCGAGGCTCATGTGCACGCACATGCCGC TCTCGCTGCTGCCGCCGGCGGTGGCTGACGGCAACTCCAACACCAAGATCATCTACATTT GCAGGGACCAGAAAGATAGATTGGTCTCCATCTGGCACTTTCGGAAACGCAATGTGCCAG ATCTGTTGCTCCAAGAAGTGTATGAGTCTATATGTGATGGCACTGGGTTTGCTGGTCCTG TCTGGGATCACTTGCTTGGTTACTGGAGGGCAAGCAAAATAGATCTAGGCCGAGTGCTCT TCTTGAAATATGAGGAGGTGCTTCGAGACCCAGTGAACACCGTTAGAGAGCTCGCACAAT TTGTCGGGCAGCCATTCTCTGACACAGAGGAAGAAGCTGGCATTGTTGCGGAGATCGTCA AGCTATGTAGCCTAGAGAGTCTAAGGAGCCAGAAAGCCAACAAAGAAGGCATACAAGGTG TGTACATCAAGTTCTCGCACGACTCGTATTTTAGGAAGGGGGTGGAAGGGGACTGGAGGA ACCACATGACTCCTAAGATGGGCGAACATCTGGATTCGATTATGCGAGAAAAGTTTGATG GATCGGGGCTCACCATATGATGCGCCATTATGGCCGGGGTTTCATCTTTTAATTTGTAGT CACAGTTTTCAAGCTATGTGTTTCATAATAAAACAAAGCCTCCTAGCCTGTTTGGAGGCT TAACTTTAACTGTTTATGCTTATAAACAGGTACATCTATGACCTATGTAATTTTCGGTGC ACCAAATAAAATCCTTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)