Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3690 cluster # 3690       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3690#0 length = 1243 sequences # 2  

consensusID : consensus_3690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1243
fasta sequence
                              [ACCACAGACCAGAGTGAGGCTAGTACATCTCATTTCAATGGCAGGTCAGGCTCCCAACATGTTGGCACCACCGACCGACGACGAGCTGCTGCACGCGCAGGCCGACCTGTGGCGCCACAGCCTCTACTTCGTCACGTCCATGGCGTTCCAGTGCGCCGTCAAGCTCGGCATCCCCACCGCCATCCACCGCGCTGGTGGCACCGCCTCGCTGCCCGACCTTGTCGCCGCCCTGTCCCTCCCGCCCGCCAAGCTCCCATTCCTCCGCCGCCTCATGCGGCTGCTGGTCCACTCGGGCGTCTTCGCCGCCGCCGACGACACCACCGGGTCGGCCGGGACGTACCGCCTCACCCCGCTGTCGTGGCTCCTGGTGGAAGGCGAAGGCGGGGCGCCCGTCGTCGACGGCCACCCGTGCCAGGTGCCCGTGGTGCTCGCCGGGACGTCCAGGCACTTCGTCGAGGCGGCGATGGGGCTCGCGGAGTGGTTCAGGAAGGACGTGCCGGCGGCCGCGCCGCCGTCGCCGTTCGAGGAGGTGCACGGCGCGGTGCTGTTCGACGAGAGCATGGCGAGCCTCCACCCGGAGGTCGACACGGTCTTCAACCAAGCTCTCGCGGCGTACGACCACTCGGGCTTCGCCACGGTTCTGAGGGAGTGTTCCGAGGTGTTCCAGGGGGTGCAGTCGCTGACCGACTGCCGCGGCGGCGATGGCGCAGCGGCGAAGGCCATCGTCGAGGCGTTCCCACATATCAAGTGCACCGTGCTGGACTTTCCCCGGGTGATTGGCAATAAACGCGGTGATGGTGTGGTGAACTATGTAGCGGGTGACATGTTCCGCGCCATCCCACCTGCTCAAGCTGTCATGCTCAAGCTTGTGCTTCACCACTGGAGTGACGAGGATTGTGTGAAAATACTAACTCAATGTAAGAAAGCTATTCCAGCCCGCAAAGATGGAGGGAAGGTGATCATCATTGACATAGTGATTGGAGCTCCTTCTGGACCACTACTGGAAGCCCAACTCCTTATGGATGTGGGTATGATGGTGGCGACCAAAGGCCGACAGCGAGACGAAAATGACTGGCGTGATCTCTTCAAGAAAGCAGGCTTCAATAACTATAAGATTGTGAAAAAATTGAGAGCTCGAGCTGTCTTTGAGGTCTATCCGTAGGGTGCTCCTAAATACCATGGAGGATGTGATCTAAGTAAATAAATGAAGGGAGTGCATACTTTATGAAATAAAGTTTTATAT]

[+] EMBL AK061247             [ACCACAGACCAGAGTGAGGCTAGTACATCTCATTTCAATGGCAGGTCAGGCTCCCAACATGTTGGCACCACCGACCGACGACGAGCTGCTGCACGCGCAGGCCGACCTGTGGCGCCACAGCCTCTACTTCGTCACGTCCATGGCGTTCCAGTGCGCCGTCAAGCTCGGCATCCCCACCGCCATCCACCGCGCTGGTGGCACCGCCTCGCTGCCCGACCTTGTCGCCGCCCTGTCCCTCCCGCCCGCCAAGCTCCCATTCCTCCGCCGCCTCATGCGGCTGCTGGTCCACTCGGGCGTCTTCGCCGCCGCCGACGACACCACCGGGTCGGCCGGGACGTACCGCCTCACCCCGCTGTCGTGGCTCCTGGTGGAAGGCGAAGGCGGGGCGCCCGTCGTCGACGGCCACCCGTGCCAGGTGCCCGTGGTGCTCGCCGGGACGTCCAGGCACTTCGTCGAGGCGGCGATGGGGCTCGCGGAGTGGTTCAGGAAGGACGTGCCGGCGGCCGCGCCGCCGTCGCCGTTCGAGGAGGTGCACGGCGCGGTGCTGTTCGACGAGAGCATGGCGAGCCTCCACCCGGAGGTCGACACGGTCTTCAACCAAGCTCTCGCGGCGTACGACCACTCGGGCTTCGCCACGGTTCTGAGGGAGTGTTCCGAGGTGTTCCAGGGGGTGCAGTCGCTGACCGACTGCCGCGGCGGCGATGGCGCAGCGGCGAAGGCCATCGTCGAGGCGTTCCCACATATCAAGTGCACCGTGCTGGACTTTCCCCGGGTGATTGGCAATAAACGCGGTGATGGTGTGGTGAACTATGTAGCGGGTGACATGTTCCGCGCCATCCCACCTGCTCAAGCTGTCATGCTCAAGCTTGTGCTTCACCACTGGAGTGACGAGGATTGTGTGAAAATACTAACTCAATGTAAGAAAGCTATTCCAGCCCGCAAAGATGGAGGGAAGGTGATCATCATTGACATAGTGATTGGAGCTCCTTCTGGACCACTACTGGAAGCCCAACTCCTTATGGATGTGGGTATGATGGTGGCGACCAAAGGCCGACAGCGAGACGAAAATGACTGGCGTGATCTCTTCAAGAAAGCAGGCTTCAATAACTATAAGATTGTGAAAAAATTGAGAGCTCGAGCTGTCTTTGAGGTCTATCCGTAGGGTGCTCCTAAATACCATGGAGGATGTGATCTAAGTAAATAAATGAAGGGAGTGCATACTTTATGAAATAAAGTTTTATAT]
[+] EMBL AU181055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGTTCGACGAGAGCATGGCGAGCCTCCACCCGGAGGTCGACACGGTCTTCAACCAAGCTCTCGCGGCGTACGACCACTCGGGCTTCGCCACGGTTCTGAGGGAGTGTTCCGAGGTGTTCCAGGGGGTGCAGTCGCTGACCGACTGCCGCGGCGGCGATGGCGCAGCGGCGAAGGCCATCGTCGAGGCGTTCCCACATATCAAGTGCACCGTGCTGGACTTTCCCCGGGTGATTGGCAATAAACGCGGTGATGGTGTGGTGAACTATGTAGCGGGTGACAT                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_3690#0 ACCACAGACCAGAGTGAGGCTAGTACATCTCATTTCAATGGCAGGTCAGGCTCCCAACAT GTTGGCACCACCGACCGACGACGAGCTGCTGCACGCGCAGGCCGACCTGTGGCGCCACAG CCTCTACTTCGTCACGTCCATGGCGTTCCAGTGCGCCGTCAAGCTCGGCATCCCCACCGC CATCCACCGCGCTGGTGGCACCGCCTCGCTGCCCGACCTTGTCGCCGCCCTGTCCCTCCC GCCCGCCAAGCTCCCATTCCTCCGCCGCCTCATGCGGCTGCTGGTCCACTCGGGCGTCTT CGCCGCCGCCGACGACACCACCGGGTCGGCCGGGACGTACCGCCTCACCCCGCTGTCGTG GCTCCTGGTGGAAGGCGAAGGCGGGGCGCCCGTCGTCGACGGCCACCCGTGCCAGGTGCC CGTGGTGCTCGCCGGGACGTCCAGGCACTTCGTCGAGGCGGCGATGGGGCTCGCGGAGTG GTTCAGGAAGGACGTGCCGGCGGCCGCGCCGCCGTCGCCGTTCGAGGAGGTGCACGGCGC GGTGCTGTTCGACGAGAGCATGGCGAGCCTCCACCCGGAGGTCGACACGGTCTTCAACCA AGCTCTCGCGGCGTACGACCACTCGGGCTTCGCCACGGTTCTGAGGGAGTGTTCCGAGGT GTTCCAGGGGGTGCAGTCGCTGACCGACTGCCGCGGCGGCGATGGCGCAGCGGCGAAGGC CATCGTCGAGGCGTTCCCACATATCAAGTGCACCGTGCTGGACTTTCCCCGGGTGATTGG CAATAAACGCGGTGATGGTGTGGTGAACTATGTAGCGGGTGACATGTTCCGCGCCATCCC ACCTGCTCAAGCTGTCATGCTCAAGCTTGTGCTTCACCACTGGAGTGACGAGGATTGTGT GAAAATACTAACTCAATGTAAGAAAGCTATTCCAGCCCGCAAAGATGGAGGGAAGGTGAT CATCATTGACATAGTGATTGGAGCTCCTTCTGGACCACTACTGGAAGCCCAACTCCTTAT GGATGTGGGTATGATGGTGGCGACCAAAGGCCGACAGCGAGACGAAAATGACTGGCGTGA TCTCTTCAAGAAAGCAGGCTTCAATAACTATAAGATTGTGAAAAAATTGAGAGCTCGAGC TGTCTTTGAGGTCTATCCGTAGGGTGCTCCTAAATACCATGGAGGATGTGATCTAAGTAA ATAAATGAAGGGAGTGCATACTTTATGAAATAAAGTTTTATAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)