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Oryza sativa
cluster # 3691 cluster # 3691       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3691#0 length = 1471 sequences # 2  

consensusID : consensus_3691#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1471
fasta sequence
                              [CAAAGACAGAGTATTCAAAGATGACAATATGAACAGAGCTAAGCTAACAGCAGCCTCAGGTCCAAGCAGCAGAAAAAACAGTAGCATCATACTATCAGTAAATAATTAAACTAGACTTAACCCTTCCTTCCAAATTAAGTTGTGTTTTTGTGGGTCCCTTGAAGCCTTTCCTTCCCTTAAATACCTCCTCTGCCTCCCCCCCCAATCCTACTCATTCCATTCCATCAACCCCTTCGCTAGTTTAGCCAATTAAGCTAATCAGCCCCTCGAAACCTCACAAAATTAACAACCAGTCCCTTCTCCGATCCGTTAGCCTTCGTTTTTCTCTTTAGTGTGTGTGTGTTGCGTTTTTGCAAATACACCCCTGAGTATTATTATTATTGGGTAAAATTGATGGATCTCGCGACGACGCCGGCGCGGCGGCCCATGGAGGCCGGGATGGCGCGGCGGCTGTGGCACGTCGTCCTCGCCGTGTGCCACATGCTCCGGCGAGGCCTCTGCCGGAAGCGCCTCATGGTGGACCTCCACGTCCTCCTCGGCCGCGGCAAGCTCGCCGGCAAGGCGCTCCGCGGCCTCCTCGCCCACCACGCCGCCGCGGGGCACGGCCACCACCTCGCGGCGTCGTCGTCGTCGTCCGCCGCGCTGGCGTCGTTCTACGGCCGCCGCCCGCGGGAGGTGGAGTTCAGCTGCACCACCACGCCGTCGTCGTACCCGCACTACGGGCTGTTCCCCTTCAAGAGCCGCGGCGGCGGCGGTGGCCGCCGCGGCGGCGGAGGCGGCGGCGAGTATGGCGGCCTCGACGCGGCGGCGGTGGCGCGGGCGTTCGAGATGATGAGCGCCGAGGTGGAAGGCACGCCGTCGTCGTCGGCGGCGGCGGTGCAGGGCGGCGGCGGCGGCGGCTGGGCCACCGCGACTCCGTCGCCGATGGTGGCGTGGATCCTGGGGCGAAGCCCCGCCGGTGTCCGGCCGCTCCGCGTCACCGACTCGCCGTTCCCCGCCGTGCCGGAGAACGGCGGCGGCGGCGGCGGCGAGCAGCGCGTGGACGACGCCGAGTTCGAGGACTTCATCAACAAGTTCTACGAGCAGCTGCGGATGCAGCCGTCCGCCGCCACGCCGGACTGCCAGCTGCGCCGCCGCGGCAGGTAGCCGGCCGGCGGCGGCCGTGCTCCCTAGCTAGCTCGATATACCACCGCTGGCGTTGCTGCGGCGGCGCCGTCGCCGGCGCCGCCAAGCTCTAGCATGCGCGCGGCGGCGACGTGGCGTGAGCTTGTACGTTCGATTGTGTTGTTGCATGCATGCATGGGGCGATGGCGATGCGGATGCAGCGGAGGATTCTACATACTTGGCAGCGTATACGAGCGTTCGTACGTACATACGTGCGTACACGAATTAAATTGTTATTATACCATGATATTGGTGTCTGGCTACATGGGGAGTATTTTTCATGCATTTGTATCAAATTTGAGATCGT]

[-] EMBL AK110599             [CAAAGACAGAGTATTCAAAGATGACAATATGAACAGAGCTAAGCTAACAGCAGCCTCAGGTCCAAGCAGCAGAAAAAACAGTAGCATCATACTATCAGTAAATAATTAAACTAGACTTAACCCTTCCTTCCAAATTAAGTTGTGTTTTTGTGGGTCCCTTGAAGCCTTTCCTTCCCTTAAATACCTCCTCTGCCTCCCCCCCCAATCCTACTCATTCCATTCCATCAACCCCTTCGCTAGTTTAGCCAATTAAGCTAATCAGCCCCTCGAAACCTCACAAAATTAACAACCAGTCCCTTCTCCGATCCGTTAGCCTTCGTTTTTCTCTTTAGTGTGTGTGTGTTGCGTTTTTGCAAATACACCCCTGAGTATTATTATTATTGGGTAAAATTGATGGATCTCGCGACGACGCCGGCGCGGCGGCCCATGGAGGCCGGGATGGCGCGGCGGCTGTGGCACGTCGTCCTCGCCGTGTGCCACATGCTCCGGCGAGGCCTCTGCCGGAAGCGCCTCATGGTGGACCTCCACGTCCTCCTCGGCCGCGGCAAGCTCGCCGGCAAGGCGCTCCGCGGCCTCCTCGCCCACCACGCCGCCGCGGGGCACGGCCACCACCTCGCGGCGTCGTCGTCGTCGTCCGCCGCGCTGGCGTCGTTCTACGGCCGCCGCCCGCGGGAGGTGGAGTTCAGCTGCACCACCACGCCGTCGTCGTACCCGCACTACGGGCTGTTCCCCTTCAAGAGCCGCGGCGGCGGCGGTGGCCGCCGCGGCGGCGGAGGCGGCGGCGAGTATGGCGGCCTCGACGCGGCGGCGGTGGCGCGGGCGTTCGAGATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK110596             [                                                                                                                                                                                                                          ATTCCATCAACCCCTTCGCTAGTTTAGCCAATTAAGCTAATCAGCCCCTCGAAACCTCACAAAATTAACAACCAGTCCCTTCTCCGATCCGTTAGCCTTCGTTTTTCTCTTTAGTGTGTGTGTGTTGCGTTTTTGCAAATACACCCCTGAGTATTATTATTATTGGGTAAAATTGATGGATCTCGCGACGACGCCGGCGCGGCGGCCCATGGAGGCCGGGATGGCGCGGCGGCTGTGGCACGTCGTCCTCGCCGTGTGCCACATGCTCCGGCGAGGCCTCTGCCGGAAGCGCCTCATGGTGGACCTCCACGTCCTCCTCGGCCGCGGCAAGCTCGCCGGCAAGGCGCTCCGCGGCCTCCTCGCCCACCACGCCGCCGCGGGGCACGGCCACCACCTCGCGGCGTCGTCGTCGTCGTCCGCCGCGCTGGCGTCGTTCTACGGCCGCCGCCCGCGGGAGGTGGAGTTCAGCTGCACCACCACGCCGTCGTCGTACCCGCACTACGGGCTGTTCCCCTTCAAGAGCCGCGGCGGCGGCGGTGGCCGCCGCGGCGGCGGAGGCGGCGGCGAGTATGGCGGCCTCGACGCGGCGGCGGTGGCGCGGGCGTTCGAGATGATGAGCGCCGAGGTGGAAGGCACGCCGTCGTCGTCGGCGGCGGCGGTGCAGGGCGGCGGCGGCGGCGGCTGGGCCACCGCGACTCCGTCGCCGATGGTGGCGTGGATCCTGGGGCGAAGCCCCGCCGGTGTCCGGCCGCTCCGCGTCACCGACTCGCCGTTCCCCGCCGTGCCGGAGAACGGCGGCGGCGGCGGCGGCGAGCAGCGCGTGGACGACGCCGAGTTCGAGGACTTCATCAACAAGTTCTACGAGCAGCTGCGGATGCAGCCGTCCGCCGCCACGCCGGACTGCCAGCTGCGCCGCCGCGGCAGGTAGCCGGCCGGCGGCGGCCGTGCTCCCTAGCTAGCTCGATATACCACCGCTGGCGTTGCTGCGGCGGCGCCGTCGCCGGCGCCGCCAAGCTCTAGCATGCGCGCGGCGGCGACGTGGCGTGAGCTTGTACGTTCGATTGTGTTGTTGCATGCATGCATGGGGCGATGGCGATGCGGATGCAGCGGAGGATTCTACATACTTGGCAGCGTATACGAGCGTTCGTACGTACATACGTGCGTACACGAATTAAATTGTTATTATACCATGATATTGGTGTCTGGCTACATGGGGAGTATTTTTCATGCATTTGTATCAAATTTGAGATCGT]


>consensus_3691#0 CAAAGACAGAGTATTCAAAGATGACAATATGAACAGAGCTAAGCTAACAGCAGCCTCAGG TCCAAGCAGCAGAAAAAACAGTAGCATCATACTATCAGTAAATAATTAAACTAGACTTAA CCCTTCCTTCCAAATTAAGTTGTGTTTTTGTGGGTCCCTTGAAGCCTTTCCTTCCCTTAA ATACCTCCTCTGCCTCCCCCCCCAATCCTACTCATTCCATTCCATCAACCCCTTCGCTAG TTTAGCCAATTAAGCTAATCAGCCCCTCGAAACCTCACAAAATTAACAACCAGTCCCTTC TCCGATCCGTTAGCCTTCGTTTTTCTCTTTAGTGTGTGTGTGTTGCGTTTTTGCAAATAC ACCCCTGAGTATTATTATTATTGGGTAAAATTGATGGATCTCGCGACGACGCCGGCGCGG CGGCCCATGGAGGCCGGGATGGCGCGGCGGCTGTGGCACGTCGTCCTCGCCGTGTGCCAC ATGCTCCGGCGAGGCCTCTGCCGGAAGCGCCTCATGGTGGACCTCCACGTCCTCCTCGGC CGCGGCAAGCTCGCCGGCAAGGCGCTCCGCGGCCTCCTCGCCCACCACGCCGCCGCGGGG CACGGCCACCACCTCGCGGCGTCGTCGTCGTCGTCCGCCGCGCTGGCGTCGTTCTACGGC CGCCGCCCGCGGGAGGTGGAGTTCAGCTGCACCACCACGCCGTCGTCGTACCCGCACTAC GGGCTGTTCCCCTTCAAGAGCCGCGGCGGCGGCGGTGGCCGCCGCGGCGGCGGAGGCGGC GGCGAGTATGGCGGCCTCGACGCGGCGGCGGTGGCGCGGGCGTTCGAGATGATGAGCGCC GAGGTGGAAGGCACGCCGTCGTCGTCGGCGGCGGCGGTGCAGGGCGGCGGCGGCGGCGGC TGGGCCACCGCGACTCCGTCGCCGATGGTGGCGTGGATCCTGGGGCGAAGCCCCGCCGGT GTCCGGCCGCTCCGCGTCACCGACTCGCCGTTCCCCGCCGTGCCGGAGAACGGCGGCGGC GGCGGCGGCGAGCAGCGCGTGGACGACGCCGAGTTCGAGGACTTCATCAACAAGTTCTAC GAGCAGCTGCGGATGCAGCCGTCCGCCGCCACGCCGGACTGCCAGCTGCGCCGCCGCGGC AGGTAGCCGGCCGGCGGCGGCCGTGCTCCCTAGCTAGCTCGATATACCACCGCTGGCGTT GCTGCGGCGGCGCCGTCGCCGGCGCCGCCAAGCTCTAGCATGCGCGCGGCGGCGACGTGG CGTGAGCTTGTACGTTCGATTGTGTTGTTGCATGCATGCATGGGGCGATGGCGATGCGGA TGCAGCGGAGGATTCTACATACTTGGCAGCGTATACGAGCGTTCGTACGTACATACGTGC GTACACGAATTAAATTGTTATTATACCATGATATTGGTGTCTGGCTACATGGGGAGTATT TTTCATGCATTTGTATCAAATTTGAGATCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)