cluster # 3700

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Oryza sativa
cluster # 3700 cluster # 3700 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3700#0 length = 1395 sequences # 2
consensusID : consensus_3700#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1395
fasta sequence
                              [TCTTGGAAGAATTAAGCAAGTAGCAGCAGCAGCTTAGGTTGATCATATGGATGGTGCGATGCAAGAGAGCAGAGAGTATTGGCGCGACGGCGGCGATGTCGTCGGAGAGGAGCTCTTGAGGGAGATCCTCGATGAGACCGCCGCGGTGCATTCCAATTCCAATTCCAATTCAAATTCAAATTCCAATTCAAAGGAGGCGGAGGAGGAGGATGAGAGAGAATATTTTGCCGCAGCTGCAGCGGATGAGCAGCTGCAGGTGGAGGCTCCTTGCGGGCGGCGGCGGCGGGAGTCGATGGTGAACAAGCTCATCTCCACGGTGTATTCTGGGCCAACCATCAGCGACATCGAGAGCGCTCTCTCCTTCACCGCCGCCGGCGACCATCAGCTACTCGCCGACGGTCACAATTTCGCTGCAAGTAGCTGTAGCCCAGTGGTTTTCTCGCCGGAGAAGACGTTGAGCAAGACGATGGAGAACAAGTACACACTGAAGATGAAAAGCTGTGGGAATAATGGTGGGCTCGCAGATGATGGGTACAAATGGAGAAAGTATGGCCAGAAATCCATTAAGAACAGCCCAAACCCCAGGAGCTACTACCGGTGCACGAATCCGCGGTGCAACGCGAAGAAGCAGGTGGAGCGAGCTGTGGACGAACCCGACACTCTGATCGTCACCTACGAGGGTCTCCACCTGCACTACACCTACTCTCACTTCCTCCACTCCACTTCTTCCTCCTCGTCGTCTACTACCACCCAACAACAACTGCAGCCTCAGCCTCAGATGATGACCAACTGCAAGAAGAAGCCCAAGCTGCACCTGCACCCGCTGCTGCACGACGACCCACCCCCACCCCCACCGCCGCCGGAAATGACGACCATGATGATAATGCAGAGCTTCAGCATCCAGCAACAACAACATGATGATGATCAGCTGCTGCAGCCTGCTGCAGATGATCACTTGATGGTGCAGGCTCCCCCCGATGATTGTTACAATATTAACGGCAGCAGCAGCAGCGGCTTGATGATGAGCTTGGACGACGACGAGCAGGCCGCCGGCGCCGGCGGGCTACTGGAGGACGTGGTGCCTCTGCTGGTCCGCCGCCCGCCGCCGCCCATCTGCAACAACAACAACTACTACTACTCGCCGGCCACCACCTGCACCTCTGACAACGAGTACGGCTCGTCGGCGTCGGCGTCGCCGTCCTCCTCCGTCTCCGTCTCCAGCTGGACTACTCCCATGTCTCCCTGCATCGACATGGCCATACTCTCCAACATCTTCTAGCTATATTCAAATTAATGAAATTTCATCTAGTATTCTCTAGCTAGCTAGCTAGTCGATCTAGTACTTACAAGATATATATAGGTATGTATGCGTACTGTACGTACGTAGCTAGTGCA]

[+] EMBL AY341842             [TCTTGGAAGAATTAAGCAAGTAGCAGCAGCAGCTTAGGTTGATCATATGGATGGTGCGATGCAAGAGAGCAGAGAGTATTGGCGCGACGGCGGCGATGTCGTCGGAGAGGAGCTCTTGAGGGAGATCCTCGATGAGACCGCCGCGGTGCATTCCAATTCCAATTCCAATTCAAATTCAAATTCCAATTCAAAGGAGGCGGAGGAGGAGGATGAGAGAGAATATTTTGCCGCAGCTGCAGCGGATGAGCAGCTGCAGGTGGAGGCTCCTTGCGGGCGGCGGCGGCGGGAGTCGATGGTGAACAAGCTCATCTCCACGGTGTATTCTGGGCCAACCATCAGCGACATCGAGAGCGCTCTCTCCTTCACCGCCGCCGGCGACCATCAGCTACTCGCCGACGGTCACAATTTCGCTGCAAGTAGCTGTAGCCCAGTGGTTTTCTCGCCGGAGAAGACGTTGAGCAAGACGATGGAGAACAAGTACACACTGAAGATGAAAAGCTGTGGGAATAATGGTGGGCTCGCAGATGATGGGTACAAATGGAGAAAGTATGGCCAGAAATCCATTAAGAACAGCCCAAACCCCAGGAGCTACTACCGGTGCACGAATCCGCGGTGCAACGCGAAGAAGCAGGTGGAGCGAGCTGTGGACGAACCCGACACTCTGATCGTCACCTACGAGGGTCTCCACCTGCACTACACCTACTCTCACTTCCTCCACTCCACTTCTTCCTCCTCGTCGTCTACTACCACCCAACAACAACTGCAGCCTCAGCCTCAGATGATGACCAACTGCAAGAAGAAGCCCAAGCTGCACCTGCACCCGCTGCTGCACGACGACCCACCCCCACCCCCACCGCCGCCGGAAATGACGACCATGATGATAATGCAGAGCTTCAGCATCCAGCAACAACAACATGATGATGATCAGCTGCTGCAGCCTGCTGCAGATGATCACTTGATGGTGCAGGCTCCCCCCGATGATTGTTACAATATTAACGGCAGCAGCAGCAGCGGCTTGATGATGAGCTTGGACGACGACGAGCAGGCCGCCGGCGCCGGCGGGCTACTGGAGGACGTGGTGCCTCTGCTGGTCCGCCGCCCGCCGCCGCCCATCTGCAACAACAACAACTACTACTACTCGCCGGCCACCACCTGCACCTCTGACAACGAGTACGGCTCGTCGGCGTCGGCGTCGCCGTCCTCCTCCGTCTCCGTCTCCAGCTGGACTACTCCCATGTCTCCCTGCATCGACATGGCCATACTCTCCAACATCTTCTAGCTATATTCAAATTAATGAAATTTCATCTAGTATTCTCTAGCTAGCTAGCTAGTCGATCTAGTACTTACAAGATATATATAGGTATGTATGCGTACTGTACGTACGTAGCTAGTGCA]
[+] EMBL AK110625             [                      GCAGCAGCAGCTTAGGTTGATCATATGGATGGTGCGATGCAAGAGAGCAGAGAGTATTGGCGCGACGGCGGCGATGTCGTCGGAGAGGAGCTCTTGAGGGAGATCCTCGATGAGACCGCCGCGGTGCATTCCAATTCCAATTCCAATTCAAATTCAAATTCCAATTCAAAGGAGGCGGAGGAGGAGGATGAGAGAGAATATTTTGCCGCAGCTGCAGCGGATGAGCAGCTGCAGGTGGAGGCTCCTTGCGGGCGGCGGCGGCGGGAGTCGATGGTGAACAAGCTCATCTCCACGGTGTATTCTGGGCCAACCATCAGCGACATCGAGAGCGCTCTCTCCTTCACCGCCGCCGGCGACCATCAGCTACTCGCCGACGGTCACAATTTCGCTGCAAGTAGCTGTAGCCCAGTGGTTTTCTCGCCGGAGAAGACGTTGAGCAAGACGATGGAGAACAAGTACACACTGAAGATGAAAAGCTGTGGGAATAATGGTGGGCTCGCAGATGATGGGTACAAATGGAGAAAGTATGGCCAGAAATCCATTAAGAACAGCCCAAACCCCAGGAGCTACTACCGGTGCACGAATCCGCGGTGCAACGCGAAGAAGCAGGTGGAGCGAGCTGTGGACGAACCCGACACTCTGATCGTCACCTACGAGGGTCTCCACCTGCACTACACCTACTCTCACTTCCTCCACTCCACTTCTTCCTCCTCGTCGTCTACTACCACCCAACAACAACTGCAGCCTCAGCCTCAGATGATGACCAACTGCAAGAAGAAGCCCAAGCTGCACCTGCACCCGCTGCTGCACGACGACCCACCCCCACCCCCACCGCCGCCGGAAATGACGACCATGATGATAATGCAGAGCTTCAGCATCCAGCAACAACAACATGATGATGATCAGCTGCTGCAGCCTGCTGCAGATGATCACTTGATGGTGCAGGCTCCCCCCGATGATTGTTACAATATTAACGGCAGCAGCAGCAGCGGCTTGATGATGAGCTTGGACGACGACGAGCAGGCCGCCGGCGCCGGCGGGCTACTGGAGGACGTGGTGCCTCTGCTGGTCCGCCGCCCGCCGCCGCCCATCTGCAACAACAACAACTACTACTACTCGCCGGCCACCACCTGCACCTCTGACAACGAGTACGGCTCGTCGGCGTCGGCGTCGCCGTCCTCCTCCGTCTCCGTCTCCAGCTGGACTACTCCCATGTCTCCCTGCATCGACATGGCCATACTCTCCAACATCTTCTAGCTATATTCAAATTAATGAAATTTCATCTAGTATTCT                                                                                ]




>consensus_3700#0
TCTTGGAAGAATTAAGCAAGTAGCAGCAGCAGCTTAGGTTGATCATATGGATGGTGCGAT
GCAAGAGAGCAGAGAGTATTGGCGCGACGGCGGCGATGTCGTCGGAGAGGAGCTCTTGAG
GGAGATCCTCGATGAGACCGCCGCGGTGCATTCCAATTCCAATTCCAATTCAAATTCAAA
TTCCAATTCAAAGGAGGCGGAGGAGGAGGATGAGAGAGAATATTTTGCCGCAGCTGCAGC
GGATGAGCAGCTGCAGGTGGAGGCTCCTTGCGGGCGGCGGCGGCGGGAGTCGATGGTGAA
CAAGCTCATCTCCACGGTGTATTCTGGGCCAACCATCAGCGACATCGAGAGCGCTCTCTC
CTTCACCGCCGCCGGCGACCATCAGCTACTCGCCGACGGTCACAATTTCGCTGCAAGTAG
CTGTAGCCCAGTGGTTTTCTCGCCGGAGAAGACGTTGAGCAAGACGATGGAGAACAAGTA
CACACTGAAGATGAAAAGCTGTGGGAATAATGGTGGGCTCGCAGATGATGGGTACAAATG
GAGAAAGTATGGCCAGAAATCCATTAAGAACAGCCCAAACCCCAGGAGCTACTACCGGTG
CACGAATCCGCGGTGCAACGCGAAGAAGCAGGTGGAGCGAGCTGTGGACGAACCCGACAC
TCTGATCGTCACCTACGAGGGTCTCCACCTGCACTACACCTACTCTCACTTCCTCCACTC
CACTTCTTCCTCCTCGTCGTCTACTACCACCCAACAACAACTGCAGCCTCAGCCTCAGAT
GATGACCAACTGCAAGAAGAAGCCCAAGCTGCACCTGCACCCGCTGCTGCACGACGACCC
ACCCCCACCCCCACCGCCGCCGGAAATGACGACCATGATGATAATGCAGAGCTTCAGCAT
CCAGCAACAACAACATGATGATGATCAGCTGCTGCAGCCTGCTGCAGATGATCACTTGAT
GGTGCAGGCTCCCCCCGATGATTGTTACAATATTAACGGCAGCAGCAGCAGCGGCTTGAT
GATGAGCTTGGACGACGACGAGCAGGCCGCCGGCGCCGGCGGGCTACTGGAGGACGTGGT
GCCTCTGCTGGTCCGCCGCCCGCCGCCGCCCATCTGCAACAACAACAACTACTACTACTC
GCCGGCCACCACCTGCACCTCTGACAACGAGTACGGCTCGTCGGCGTCGGCGTCGCCGTC
CTCCTCCGTCTCCGTCTCCAGCTGGACTACTCCCATGTCTCCCTGCATCGACATGGCCAT
ACTCTCCAACATCTTCTAGCTATATTCAAATTAATGAAATTTCATCTAGTATTCTCTAGC
TAGCTAGCTAGTCGATCTAGTACTTACAAGATATATATAGGTATGTATGCGTACTGTACG
TACGTAGCTAGTGCA
clustalw multiple alignements is not computed in this case