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Oryza sativa
cluster # 3711 cluster # 3711       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3711#0 length = 1375 sequences # 2  

consensusID : consensus_3711#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1375
fasta sequence
                              [CAACTTTCAATTGGTCACTGTTTCATCCAAATCATCACCAAAGAGACTTGCTCAAAAAGGCAAAGAAGTTACTCAACAGAAGGGTATTTTACTGCCTAAAGAAAGGGTCCGAGAAGTGGTAGTCTATATCTTATTCTCAGACTCAGTTTCCAAAGGGCATGTTATGCTTCCCCACTCTACTCGCCACTACATAAGAGCCGACATTCATTCATGGGTTTATGTGAAGACATTCTCAGCTAATGTCAAGAATGATCAACCTATATTGACAATAAGTCCGTTACATTTTAAGATGCAAGAAAAAGTTGCTCATGATGGTAGTGAATTAGGAAGTCAAGAAGCGAACATTTGGAGGAAAACTAGCATCCCTTCAGAAAATAGAGATCCCTTTCAGGAAGCTCATTTTGGTAACAATGATGATGTTCTGAGCACAGATGTTGATAACACTTCTGAATCCATATTGGAACATAAGATTCTCATTAAACAGTGGCTTGTTGGGCAACTTAAAGATATGGGCTTACACGTTGGGAACTCTGAGATAAGTCCAGTAGTTTTACCAACCAAAGTTTTGCTCCATTTTGAAGCAGTAGACCAAAAGCATAACAGGGGAAAAGAATTTCTATACCTGCTANAGGTTGGCTTTGAAAATTCTAGCTACAGCAATTCGCAAGGCAATGCTGAGCTTTCTTGGAGCATTCAAACTGATGATCTAGAAAACTTGGAATTAAAATTTGGGAGGTTGGAGCTGGGTGAGCCTGAATTTTTTGATTCTGTATTAGATGATGGGTTCAGCAATGGGTTCAAGCTGACTCGATCTTCTTTAGGCTGGATGGAGAATGCAATGTCAGATGTCACAAAAAGGCTATCTGTTCTCTTATCGTCAACTAGTCTGAGGTTATTTGACCAGCTAAAGCTCCCCTTCCCTGGTCATGTTCTTGTCCTTGGACCTCGAGGTTCTGGGAAAACTGCTTTGGTTAGGGCTGCTGCAAAATACTTTGAAGACCATAAAGAGATATTGGCTCATGTAATATATATAGATTGTTCCAAACTTACAGTGGGCAAGGCTAAGGAGACAAAGCAAACAATTGAAGATAGCATTTCTGAAGCTCTGCTTCACGCACCTTCAGTTATCTTATTTGATGATATGGACAATGTGGTTTCAGTGTCTTCAGATCCTCAAGCACCTCAGTCATCCAGTTCATCTGATTCTATAGTAAGATATTTGGTTGATATCATGGATGAGTACAAGGATAAGGCTCGGAATGCATGTGGATATGGACCTATTGCATTAATGGCTTCAGCTCAATCACTTCAGAGTCTTCCTCAAGATTTAACTTCTTCTGGGAGATTTGATTTCCACGTTGAGCTTCCTGTTCTT]

[+] EMBL CB630577             [CAACTTTCAATTGGTCACTGTTTCATCCAAATCATCACCAAAGAGACTTGCTCAAAAAGGCAAAGAAGTTACTCAACAGAAGGGTATTTTACTGCCTAAAGAAAGGGTCCGAGAAGTGGTAGTCTATATCTTATTCTCAGACTCAGTTTCCAAAGGGCATGTTATGCTTCCCCACTCTACTCGCCACTACATAAGAGCCGACATTCATTCATGGGTTTATGTGAAGACATTCTCAGCTAATGTCAAGAATGATCAACCTATATTGACAATAAGTCCGTTACATTTTAAGATGCAAGAAAAAGTTGCTCATGATGGTAGTGAATTAGGAAGTCAAGAAGCGAACATTTGGAGGAAAACTAGCATCCCTTCAGAAAATAGAGATCCCTTTCAGGAAGCTCATTTTGGTAACAATGATGATGTTCTGAGCACAGATGTTGATAACACTTCTGAATCCATATTGGAACATAAGATTCTCATTAAACAGTGGCTTGTTGGGCAACTTAAAGATATGGGCTTACACGTTGGGAACTCTGAGATAAGTCCAGTAGTTTTACCAACCAAAGTTTTGCTCCATTTTGAAGCAGTAGACCAAAAGCATAACAGGGGAAAAGAATTTCTATACCTGCTANAGGTTGGCTTTGAAAATTCTAGCTACAGCAATTCGCAAGGCAATGCTGAGCTTTCTTGGAGCATTCAAACTGATGATCTAGAAAACTTGGAATTAAAATTTGGGAGGTTGGAGCTGGGTGAGCCTGAATTTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB632934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGAATCCCTATACCTGCTAAAGGTTGGCTTTGAAAATTCTAGCTACAGCAATTCGCAAGGCAATGCTGAGCTTTCTTGGAGCATTCAAACTGATGATCTAGAAAACTTGGAATTAAAATTTGGGAGGTTGGAGCTGGGTGAGCCTGAATTTTTTGATTCTGTATTAGATGATGGGTTCAGCAATGGGTTCAAGCTGACTCGATCTTCTTTAGGCTGGATGGAGAATGCAATGTCAGATGTCACAAAAAGGCTATCTGTTCTCTTATCGTCAACTAGTCTGAGGTTATTTGACCAGCTAAAGCTCCCCTTCCCTGGTCATGTTCTTGTCCTTGGACCTCGAGGTTCTGGGAAAACTGCTTTGGTTAGGGCTGCTGCAAAATACTTTGAAGACCATAAAGAGATATTGGCTCATGTAATATATATAGATTGTTCCAAACTTACAGTGGGCAAGGCTAAGGAGACAAAGCAAACAATTGAAGATAGCATTTCTGAAGCTCTGCTTCACGCACCTTCAGTTATCTTATTTGATGATATGGACAATGTGGTTTCAGTGTCTTCAGATCCTCAAGCACCTCAGTCATCCAGTTCATCTGATTCTATAGTAAGATATTTGGTTGATATCATGGATGAGTACAAGGATAAGGCTCGGAATGCATGTGGATATGGACCTATTGCATTAATGGCTTCAGCTCAATCACTTCAGAGTCTTCCTCAAGATTTAACTTCTTCTGGGAGATTTGATTTCCACGTTGAGCTTCCTGTTCTT]


>consensus_3711#0 CAACTTTCAATTGGTCACTGTTTCATCCAAATCATCACCAAAGAGACTTGCTCAAAAAGG CAAAGAAGTTACTCAACAGAAGGGTATTTTACTGCCTAAAGAAAGGGTCCGAGAAGTGGT AGTCTATATCTTATTCTCAGACTCAGTTTCCAAAGGGCATGTTATGCTTCCCCACTCTAC TCGCCACTACATAAGAGCCGACATTCATTCATGGGTTTATGTGAAGACATTCTCAGCTAA TGTCAAGAATGATCAACCTATATTGACAATAAGTCCGTTACATTTTAAGATGCAAGAAAA AGTTGCTCATGATGGTAGTGAATTAGGAAGTCAAGAAGCGAACATTTGGAGGAAAACTAG CATCCCTTCAGAAAATAGAGATCCCTTTCAGGAAGCTCATTTTGGTAACAATGATGATGT TCTGAGCACAGATGTTGATAACACTTCTGAATCCATATTGGAACATAAGATTCTCATTAA ACAGTGGCTTGTTGGGCAACTTAAAGATATGGGCTTACACGTTGGGAACTCTGAGATAAG TCCAGTAGTTTTACCAACCAAAGTTTTGCTCCATTTTGAAGCAGTAGACCAAAAGCATAA CAGGGGAAAAGAATTTCTATACCTGCTANAGGTTGGCTTTGAAAATTCTAGCTACAGCAA TTCGCAAGGCAATGCTGAGCTTTCTTGGAGCATTCAAACTGATGATCTAGAAAACTTGGA ATTAAAATTTGGGAGGTTGGAGCTGGGTGAGCCTGAATTTTTTGATTCTGTATTAGATGA TGGGTTCAGCAATGGGTTCAAGCTGACTCGATCTTCTTTAGGCTGGATGGAGAATGCAAT GTCAGATGTCACAAAAAGGCTATCTGTTCTCTTATCGTCAACTAGTCTGAGGTTATTTGA CCAGCTAAAGCTCCCCTTCCCTGGTCATGTTCTTGTCCTTGGACCTCGAGGTTCTGGGAA AACTGCTTTGGTTAGGGCTGCTGCAAAATACTTTGAAGACCATAAAGAGATATTGGCTCA TGTAATATATATAGATTGTTCCAAACTTACAGTGGGCAAGGCTAAGGAGACAAAGCAAAC AATTGAAGATAGCATTTCTGAAGCTCTGCTTCACGCACCTTCAGTTATCTTATTTGATGA TATGGACAATGTGGTTTCAGTGTCTTCAGATCCTCAAGCACCTCAGTCATCCAGTTCATC TGATTCTATAGTAAGATATTTGGTTGATATCATGGATGAGTACAAGGATAAGGCTCGGAA TGCATGTGGATATGGACCTATTGCATTAATGGCTTCAGCTCAATCACTTCAGAGTCTTCC TCAAGATTTAACTTCTTCTGGGAGATTTGATTTCCACGTTGAGCTTCCTGTTCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)