cluster # 3790

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Oryza sativa
cluster # 3790 cluster # 3790 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3790#0 length = 1114 sequences # 2

consensusID : consensus_3790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1114
fasta sequence

                              [GTACACACTCATTGGCCACTTTCCCTTCTTCCACCGCTATACCTTCCCTTCCTCCATGGCTTCAGAATCTCTGCAATGCAAGGTTTTGGCTCTCAGAGTGTCCATCCACTGCGAGGGATGCAAGAAGAAGGTGAAGAAGGTGCTCCAGAGAGTTGAAGGCGTGTACAGATGCGACGTCGATGGCCGGAGCAACAAGGCGACGGTCACCGTCACCGGCAAGGTCAGCGCCGACACTCTCGTAAGGAAGCTGAGGAGGGCCGGGAAGCACGCCGAGCAATGGCCGGAGGAGCAGCAGCAGCAGCAACCCAATGGTGGTCAGTGCCAAGAAGAAACCAAGAACCAAGCTGCCGAGCCGGGCATGTCCGGCGAGCCGGCTGAGCCGGAGAAGCCGGCGTCCGGCGACGCCGCGGAGCCAAGCGACCCAAAGGTGACGCATGAAGAACCCAAGAAGGTCGCCGGCGAGGGCGCCGCCGCCGTGGCGCCGGCTGAAGACGGTGGCACGGAGATCACCGACGCCAATGTCAGTGAGAGCGCCGGCGACGGCGGCGGCGGCGGCGGCGGCGTCGAGACGGTCAAGGCGCAGCAGCCCAGTGAGCCCAAGAGGAGAAGGAAGCAGCAGCCGCCGCAGCAGCAGAAAGAGGAGAAGGCAGGTGAAGCCACCATGGCCACGGCGGCGGCGGCGGCGGCATCAACGCAGGGCAACCACACGAGCCACCACTTCCCGGCGGCGCCATTGCAGCAGCAGCCGGTGCACGTCATGAGCTACAACGTGGCGCGGCCGAGCTCGAGCGCGGCGTACTACGCCGCCGCGCGT-CCTGCATCCGCCGCGAGGCCTCCACCTCCATTGCCGCCGGCGCCGCCGCAGGAGCACTCGTACGCGTACTCGCCGTACTACTCGCAGTCTCAGCCGTCGCCTTACCGCTACGGCGGCTACTACAGCTACTACTACTACGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCCAGAGGACGCCGCAGAGGAGCGCGGCCTCGCCGGCGAGGAACTCCTACGGCGACCTTTTCAGCGACGACAACGCCAACTCTTGCAGCGTCATGTGAAACCAAGCTCGAAAAAATTAGTTCAGATTACATGTT]

[+] EMBL AK058953             [GTACACACTCATTGGCCACTTTCCCTTCTTCCACCGCTATACCTTCCCTTCCTCCATGGCTTCAGAATCTCTGCAATGCAAGGTTTTGGCTCTCAGAGTGTCCATCCACTGCGAGGGATGCAAGAAGAAGGTGAAGAAGGTGCTCCAGAGAGTTGAAGGCGTGTACAGATGCGACGTCGATGGCCGGAGCAACAAGGCGACGGTCACCGTCACCGGCAAGGTCAGCGCCGACACTCTCGTAAGGAAGCTGAGGAGGGCCGGGAAGCACGCCGAGCAATGGCCGGAGGAGCAGCAGCAGCAGCAACCCAATGGTGGTCAGTGCCAAGAAGAAACCAAGAACCAAGCTGCCGAGCCGGGCATGTCCGGCGAGCCGGCTGAGCCGGAGAAGCCGGCGTCCGGCGACGCCGCGGAGCCAAGCGACCCAAAGGTGACGCATGAAGAACCCAAGAAGGTCGCCGGCGAGGGCGCCGCCGCCGTGGCGCCGGCTGAAGACGGTGGCACGGAGATCACCGACGCCAATGTCAGTGAGAGCGCCGGCGACGGCGGCGGCGGCGGCGGCGGCGTCGAGACGGTCAAGGCGCAGCAGCCCAGTGAGCCCAAGAGGAGAAGGAAGCAGCAGCCGCCGCAGCAGCAGAAAGAGGAGAAGGCAGGTGAAGCCACCATGGCCACGGCGGCGGCGGCGGCGGCATCAACGCAGGGCAACCACACGAGCCACCACTTCCCGGCGGCGCCATTGCAGCAGCAGCCGGTGCACGTCATGAGCTACAACGTGGCGCGGCCGAGCTCGAGCGCGGCGTACTACGCCGCCGCGCGT CCTGCATCCGCCGCGAGGCCTCCACCTCCATTGCCGCCGGCGCCGCCGCAGGAGCACTCGTACGCGTACTCGCCGTACTACTCGCAGTCTCAGCCGTCGCCTTACCGCTACGGCGGCTACTACAGCTACTACTACTACGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCCAGAGGACGCCGCAGAGGAGCGCGGCCTCGCCGGCGAGGAACTCCTACGGCGACCTTTTCAGCGACGACAACGCCAACTCTTGCAGCGTCATGTGAAACCAAGCTCGAAAAAATTAGTTCAGATTACATGTT]
[+] EMBL OSC31061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGCGGCCGAGCTCGAGCGCGGCGTACTACG CGCTGCGCGTACCTGCATCCGCCGCGAGGCATCCACCTCCATTGCCGCCGGCGCCGCCGCAGGAGCACTCGTACGCGTACTCGCCGTACTACTCGCAGTCTCAGCCGTCGCCTTACCGCTACGGGGGNTACTACAGCTACTACTACTACGGCGGCGGCGGCGGCG                                                                                                                                                  ]




>consensus_3790#0
GTACACACTCATTGGCCACTTTCCCTTCTTCCACCGCTATACCTTCCCTTCCTCCATGGC
TTCAGAATCTCTGCAATGCAAGGTTTTGGCTCTCAGAGTGTCCATCCACTGCGAGGGATG
CAAGAAGAAGGTGAAGAAGGTGCTCCAGAGAGTTGAAGGCGTGTACAGATGCGACGTCGA
TGGCCGGAGCAACAAGGCGACGGTCACCGTCACCGGCAAGGTCAGCGCCGACACTCTCGT
AAGGAAGCTGAGGAGGGCCGGGAAGCACGCCGAGCAATGGCCGGAGGAGCAGCAGCAGCA
GCAACCCAATGGTGGTCAGTGCCAAGAAGAAACCAAGAACCAAGCTGCCGAGCCGGGCAT
GTCCGGCGAGCCGGCTGAGCCGGAGAAGCCGGCGTCCGGCGACGCCGCGGAGCCAAGCGA
CCCAAAGGTGACGCATGAAGAACCCAAGAAGGTCGCCGGCGAGGGCGCCGCCGCCGTGGC
GCCGGCTGAAGACGGTGGCACGGAGATCACCGACGCCAATGTCAGTGAGAGCGCCGGCGA
CGGCGGCGGCGGCGGCGGCGGCGTCGAGACGGTCAAGGCGCAGCAGCCCAGTGAGCCCAA
GAGGAGAAGGAAGCAGCAGCCGCCGCAGCAGCAGAAAGAGGAGAAGGCAGGTGAAGCCAC
CATGGCCACGGCGGCGGCGGCGGCGGCATCAACGCAGGGCAACCACACGAGCCACCACTT
CCCGGCGGCGCCATTGCAGCAGCAGCCGGTGCACGTCATGAGCTACAACGTGGCGCGGCC
GAGCTCGAGCGCGGCGTACTACGCCGCCGCGCGTCCTGCATCCGCCGCGAGGCCTCCACC
TCCATTGCCGCCGGCGCCGCCGCAGGAGCACTCGTACGCGTACTCGCCGTACTACTCGCA
GTCTCAGCCGTCGCCTTACCGCTACGGCGGCTACTACAGCTACTACTACTACGGCGGCGG
CGGCGGCGGCGGTGGCGGCGGCCAGAGGACGCCGCAGAGGAGCGCGGCCTCGCCGGCGAG
GAACTCCTACGGCGACCTTTTCAGCGACGACAACGCCAACTCTTGCAGCGTCATGTGAAA
CCAAGCTCGAAAAAATTAGTTCAGATTACATGTT

clustalw multiple alignements is not computed in this case