cluster # 3825

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Oryza sativa
cluster # 3825 cluster # 3825 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3825#0 length = 1089 sequences # 2

consensusID : consensus_3825#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1089
fasta sequence

                              [ATTTCGTCGATTGTCCTCCTCTTCCCTTGACGGTGCAAAGCAGCATCTCCATCGCAATGGATTACCACCGAATCCACCCGGTGGGCGTCGGCTCGCCGGCGCCGGCGCCGGACAGCCAGCAGCAGGTCGGCAAGGGGAGGTCGACGGCGAGCTACGGTGAGAAGGAGCAGCTGCCGATCACCGCGCCACGGCCGTACGCGCCGGCACCGCTGCCGCCGCCGCCGCCGCGGCGCAGGAGCCGCGGGCGGCGGTGCTGCCGGTGCGTGTGCTGGACGCTGCTCGCCGTACTCGTCCTCGCCGTGGCGCTGGGCGCCACGGCGGGCATCCTGTACGCGGTGTTCAAGCCCAAGATACCGGACTTCCACGTGGACCGGCTCACCGTGACGCGGTTCGACGTGAACGCGACGGCGGCGACGGTGAGCGACGCGTTCGAGGTGGAGGTGACGTCGACGAACCCGAACCGGCGGATCGGGATCTACTACGACGGCGGCGAGGTGACGGCGTCGTTCAACGGCACGGAGCTGTGCCGCGGCGGGTTCCCGGCGCTGTACCAGGGCCACCGGAGCACGGTGCGCCCCGTCATCCTGCTCGCCGGCGAGACGCGGCTGGACAGCGCCGTGGCGCTGCAGCTGGCGCGGCAGCAGCAGGCCGGGTTCGTGCCGCTCACGGTGTGGGCGCGCGTGCCGATCCGCATCAAGTTCGGCACCATCAAGCTGTGGAAGATGACCGGGAAGGCGACCTGCAACCTCGTCGTCGACAACCTCGTCGCCGGCAGGCAGATCCGCATCCGCTCCAACAGCTGCAGCTTCAAGCTCAAGGTCTGATCGAGCTTTGTAGAGGCGTTGATCCATCTCCATTTCTGTGAATCCATCCGTTGAGTTGAGATTAGCAGGTGGTAGAGGCGCGTATTTTTACATTTTTACCAATACTAGTTTCTGTGAATCCATCCGTTTTTGGAAGCTCTGCTACTCAGATTAGGTTTAATGTATGAGCACCGATGTATATATGAAAATGCATACGCGATGAATTTCTTTGAAAATGGCAATAAAGATGGCGAATTTGTTCGTCTGGCATGCCCCAACTGAAGCA]

[+] EMBL AK108084             [ATTTCGTCGATTGTCCTCCTCTTCCCTTGACGGTGCAAAGCAGCATCTCCATCGCAATGGATTACCACCGAATCCACCCGGTGGGCGTCGGCTCGCCGGCGCCGGCGCCGGACAGCCAGCAGCAGGTCGGCAAGGGGAGGTCGACGGCGAGCTACGGTGAGAAGGAGCAGCTGCCGATCACCGCGCCACGGCCGTACGCGCCGGCACCGCTGCCGCCGCCGCCGCCGCGGCGCAGGAGCCGCGGGCGGCGGTGCTGCCGGTGCGTGTGCTGGACGCTGCTCGCCGTACTCGTCCTCGCCGTGGCGCTGGGCGCCACGGCGGGCATCCTGTACGCGGTGTTCAAGCCCAAGATACCGGACTTCCACGTGGACCGGCTCACCGTGACGCGGTTCGACGTGAACGCGACGGCGGCGACGGTGAGCGACGCGTTCGAGGTGGAGGTGACGTCGACGAACCCGAACCGGCGGATCGGGATCTACTACGACGGCGGCGAGGTGACGGCGTCGTTCAACGGCACGGAGCTGTGCCGCGGCGGGTTCCCGGCGCTGTACCAGGGCCACCGGAGCACGGTGCGCCCCGTCATCCTGCTCGCCGGCGAGACGCGGCTGGACAGCGCCGTGGCGCTGCAGCTGGCGCGGCAGCAGCAGGCCGGGTTCGTGCCGCTCACGGTGTGGGCGCGCGTGCCGATCCGCATCAAGTTCGGCACCATCAAGCTGTGGAAGATGACCGGGAAGGCGACCTGCAACCTCGTCGTCGACAACCTCGTCGCCGGCAGGCAGATCCGCATCCGCTCCAACAGCTGCAGCTTCAAGCTCAAGGTCTGATCGAGCTTTGTAGAGGCGTTGATCCATCTCCATTTCTGTGAATCCATCCGTTGAGTTGAGATTAGCAGGTGGTAGAGGCGCGTATTTTTACATTTTTACCAATACTAGTTTCTGTGAATCCATCCGTTTTTGGAAGCTCTGCTACTCAGATTAGGTTTAATGTATGAGCACCGATGTATATATGAAAATGCATACGCGATGAATTTCTTTGAAAATGGCAATAAAGATGGCGAATTTGTTCGTCTGGCATGCCCCAACTGAAGCA]
[+] EMBL CF305027             [         ATTGTCCTCCTCTTCCCTTGACGGTGCAAAGCAGCATCTCCATCGCAATGGATTACCACCGAATCCACCCGGTGGGCGTCGGCTCGCCGGCGCCGGCGCCGGACAGCCAGCAGCAGGTCGGCAAGGGGAGGTCGACGGCGAGCTACGGTGAGAAGGAGCAGCTGCCGATCACCGCGCCACGGCCGTACGCGCCGGCACCGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_3825#0
ATTTCGTCGATTGTCCTCCTCTTCCCTTGACGGTGCAAAGCAGCATCTCCATCGCAATGG
ATTACCACCGAATCCACCCGGTGGGCGTCGGCTCGCCGGCGCCGGCGCCGGACAGCCAGC
AGCAGGTCGGCAAGGGGAGGTCGACGGCGAGCTACGGTGAGAAGGAGCAGCTGCCGATCA
CCGCGCCACGGCCGTACGCGCCGGCACCGCTGCCGCCGCCGCCGCCGCGGCGCAGGAGCC
GCGGGCGGCGGTGCTGCCGGTGCGTGTGCTGGACGCTGCTCGCCGTACTCGTCCTCGCCG
TGGCGCTGGGCGCCACGGCGGGCATCCTGTACGCGGTGTTCAAGCCCAAGATACCGGACT
TCCACGTGGACCGGCTCACCGTGACGCGGTTCGACGTGAACGCGACGGCGGCGACGGTGA
GCGACGCGTTCGAGGTGGAGGTGACGTCGACGAACCCGAACCGGCGGATCGGGATCTACT
ACGACGGCGGCGAGGTGACGGCGTCGTTCAACGGCACGGAGCTGTGCCGCGGCGGGTTCC
CGGCGCTGTACCAGGGCCACCGGAGCACGGTGCGCCCCGTCATCCTGCTCGCCGGCGAGA
CGCGGCTGGACAGCGCCGTGGCGCTGCAGCTGGCGCGGCAGCAGCAGGCCGGGTTCGTGC
CGCTCACGGTGTGGGCGCGCGTGCCGATCCGCATCAAGTTCGGCACCATCAAGCTGTGGA
AGATGACCGGGAAGGCGACCTGCAACCTCGTCGTCGACAACCTCGTCGCCGGCAGGCAGA
TCCGCATCCGCTCCAACAGCTGCAGCTTCAAGCTCAAGGTCTGATCGAGCTTTGTAGAGG
CGTTGATCCATCTCCATTTCTGTGAATCCATCCGTTGAGTTGAGATTAGCAGGTGGTAGA
GGCGCGTATTTTTACATTTTTACCAATACTAGTTTCTGTGAATCCATCCGTTTTTGGAAG
CTCTGCTACTCAGATTAGGTTTAATGTATGAGCACCGATGTATATATGAAAATGCATACG
CGATGAATTTCTTTGAAAATGGCAATAAAGATGGCGAATTTGTTCGTCTGGCATGCCCCA
ACTGAAGCA

clustalw multiple alignements is not computed in this case