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Oryza sativa
cluster # 3831 cluster # 3831       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3831#0 length = 1265 sequences # 2  

consensusID : consensus_3831#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1265
fasta sequence
                              [CTCACACGAACGACTGACTTTTGTAGCCACACCACCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCCCCTCTCTCTCTCAAACATACACACATTTCACAAGAACCTGCGAGAAAGAAGAGAAGTGTGTGTCGAGATGATGATGCTCCGGCTCGTCGGCGCCGAAGCTAGGAGGAGGGCGGCCACCGGAGCTGCCGGCGGCGAGCGGTGGCTGTCGGCGGCGGCGGCGGCGCCGACCAAGGGAAGGCTCGAGGGGAAAATTGCAATAATAACCGGGGGAGCAAGCGGGCTCGGGAAGGCGACGGCCCGCGAGTTCATCCGCGAGGGCGCCGCCGCCGTCTTCATCGCCGACGTGAACTCCGACCTGGGCGCCGAGGCTGCCGCCGAGCTCGGCCCGCGCGCCCACTTCGTGCGCTGCGACGTCGCCGACGAGGGCAGCGTGGCCGCCGCCGTGGACGGCGCCGTGGCGAGCCACGGGCGCCTCGACGTGATGTTCAACAACGCCGGCGTGGCGGGCCCGCTCGCCGGCGCCACGGAGGTGGCGTCGCTGGACCTGGCCGCGCTCGACGCCGTCATAGCCGTGAACCTGCGCGGGACGCTCGCCGGGATCAAGCACGCGGCGCGCGTGATGCGCCCGCGCGGGTCGGGGTCCATCCTGTGCACGGCGAGCGTCAGCGGCGTCATGGGCGGGCTCGGCACGTACCCGTACTCGGTGTCCAAGTTCGCCGTGGCGGGCGCCGTCAGGGCCGCCGCCGCCGAGCTGTCGCGCCACGGCGTCCGCGTCAACTGCGTCTCGCCGTTCGCCGTGGCGACGCCGATGGTGGTGGCGCAGTTCGCGCAGATGCTCGGCGGCGCCGACGAGGCGCGGGTGGCAGCGGTGGTGAGGGGGCTCGGCGAGCTGAGGGGCGCGGCGTGCGAGGCGGAGGACGTGGCGAGGGCGGCGGCGTACCTCGCCTCCGACGACGCCAAGTACGTGTCCGGGCACAACCTGGTGGTGGACGGCGGCTTCACCAGCTACAAGCACCTGCCGATTCCCCAGCCGCACGATTGAGCTGATCGGACGGCCACGGAAGATCCGTTTGGTGTAGAGATGGGGGTTATGTGAATCCTCTATCCTGGAAAGGAAGTGGATTCGAGTAGAGAGAAAAAGGATTGTGGATTTTTAGGTGGTTTTTTTTTCTTATCTGGTTAGTGTGTGGGTGAAATTCTGGATGTCTGAAATTTGGTTAAAACTTAAAAGTTGAGTA]

[+] EMBL AK110972             [CTCACACGAACGACTGACTTTTGTAGCCACACCACCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCCCCTCTCTCTCTCAAACATACACACATTTCACAAGAACCTGCGAGAAAGAAGAGAAGTGTGTGTCGAGATGATGATGCTCCGGCTCGTCGGCGCCGAAGCTAGGAGGAGGGCGGCCACCGGAGCTGCCGGCGGCGAGCGGTGGCTGTCGGCGGCGGCGGCGGCGCCGACCAAGGGAAGGCTCGAGGGGAAAATTGCAATAATAACCGGGGGAGCAAGCGGGCTCGGGAAGGCGACGGCCCGCGAGTTCATCCGCGAGGGCGCCGCCGCCGTCTTCATCGCCGACGTGAACTCCGACCTGGGCGCCGAGGCTGCCGCCGAGCTCGGCCCGCGCGCCCACTTCGTGCGCTGCGACGTCGCCGACGAGGGCAGCGTGGCCGCCGCCGTGGACGGCGCCGTGGCGAGCCACGGGCGCCTCGACGTGATGTTCAACAACGCCGGCGTGGCGGGCCCGCTCGCCGGCGCCACGGAGGTGGCGTCGCTGGACCTGGCCGCGCTCGACGCCGTCATAGCCGTGAACCTGCGCGGGACGCTCGCCGGGATCAAGCACGCGGCGCGCGTGATGCGCCCGCGCGGGTCGGGGTCCATCCTGTGCACGGCGAGCGTCAGCGGCGTCATGGGCGGGCTCGGCACGTACCCGTACTCGGTGTCCAAGTTCGCCGTGGCGGGCGCCGTCAGGGCCGCCGCCGCCGAGCTGTCGCGCCACGGCGTCCGCGTCAACTGCGTCTCGCCGTTCGCCGTGGCGACGCCGATGGTGGTGGCGCAGTTCGCGCAGATGCTCGGCGGCGCCGACGAGGCGCGGGTGGCAGCGGTGGTGAGGGGGCTCGGCGAGCTGAGGGGCGCGGCGTGCGAGGCGGAGGACGTGGCGAGGGCGGCGGCGTACCTCGCCTCCGACGACGCCAAGTACGTGTCCGGGCACAACCTGGTGGTGGACGGCGGCTTCACCAGCTACAAGCACCTGCCGATTCCCCAGCCGCACGATTGAGCTGATCGGACGGCCACGGAAGATCCGTTTGGTGTAGAGATGGGGGTTATGTGAATCCTCTATCCTGGAAAGGAAGTGGATTCGAGTAGAGAGAAAAAGGATTGTGGATTTTTAGGTGGTTTTTTTTTCTTATCTGGTTAGTGTGTGGGTGAAATTCTGGATGTCTGAAATTTGGTTAAAACTTAAAAGTTGAGTA]
[+] EMBL OSR18931A            [                                                                                                             ACATTTCACAAGAACCTGCGAGAAAGAAGAGAAGTGTGTGTCGAGATGATGATGCTCCGGCTCGTCGGCGCCGAAGCTAGGAGGANGGTGGNCACCGGAGCTGCCGGCGGCGAGCGGTGGCTNTCGGCGGCGGCGGCGGCGCC ACCAAGGGAAGGCTCGAGGGGAAANTTGCAATATTAACCGGGGNAGCAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_3831#0 CTCACACGAACGACTGACTTTTGTAGCCACACCACCTCATCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCCTCTCTCTCTCCCCTCTCTCTCTCAAACATACACACATTTCACAA GAACCTGCGAGAAAGAAGAGAAGTGTGTGTCGAGATGATGATGCTCCGGCTCGTCGGCGC CGAAGCTAGGAGGAGGGCGGCCACCGGAGCTGCCGGCGGCGAGCGGTGGCTGTCGGCGGC GGCGGCGGCGCCGACCAAGGGAAGGCTCGAGGGGAAAATTGCAATAATAACCGGGGGAGC AAGCGGGCTCGGGAAGGCGACGGCCCGCGAGTTCATCCGCGAGGGCGCCGCCGCCGTCTT CATCGCCGACGTGAACTCCGACCTGGGCGCCGAGGCTGCCGCCGAGCTCGGCCCGCGCGC CCACTTCGTGCGCTGCGACGTCGCCGACGAGGGCAGCGTGGCCGCCGCCGTGGACGGCGC CGTGGCGAGCCACGGGCGCCTCGACGTGATGTTCAACAACGCCGGCGTGGCGGGCCCGCT CGCCGGCGCCACGGAGGTGGCGTCGCTGGACCTGGCCGCGCTCGACGCCGTCATAGCCGT GAACCTGCGCGGGACGCTCGCCGGGATCAAGCACGCGGCGCGCGTGATGCGCCCGCGCGG GTCGGGGTCCATCCTGTGCACGGCGAGCGTCAGCGGCGTCATGGGCGGGCTCGGCACGTA CCCGTACTCGGTGTCCAAGTTCGCCGTGGCGGGCGCCGTCAGGGCCGCCGCCGCCGAGCT GTCGCGCCACGGCGTCCGCGTCAACTGCGTCTCGCCGTTCGCCGTGGCGACGCCGATGGT GGTGGCGCAGTTCGCGCAGATGCTCGGCGGCGCCGACGAGGCGCGGGTGGCAGCGGTGGT GAGGGGGCTCGGCGAGCTGAGGGGCGCGGCGTGCGAGGCGGAGGACGTGGCGAGGGCGGC GGCGTACCTCGCCTCCGACGACGCCAAGTACGTGTCCGGGCACAACCTGGTGGTGGACGG CGGCTTCACCAGCTACAAGCACCTGCCGATTCCCCAGCCGCACGATTGAGCTGATCGGAC GGCCACGGAAGATCCGTTTGGTGTAGAGATGGGGGTTATGTGAATCCTCTATCCTGGAAA GGAAGTGGATTCGAGTAGAGAGAAAAAGGATTGTGGATTTTTAGGTGGTTTTTTTTTCTT ATCTGGTTAGTGTGTGGGTGAAATTCTGGATGTCTGAAATTTGGTTAAAACTTAAAAGTT GAGTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)