cluster # 3857

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Oryza sativa
cluster # 3857 cluster # 3857 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3857#0 length = 1157 sequences # 2

consensusID : consensus_3857#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1157
fasta sequence

                              [ATATGTAAGCTAGGCAGAGACAACCTTCATTGTCTAACAATTCATATTTCATCTGTATCAGCAGATGACTTCATCCAGGAACCATGGTGCCCTCCTCCATTGAGTCTTCAAGAACTTGTCATCAATCAGGCGCCAATGTCTAGGGTTCCAAGATGGATTGGCTCACTTGTCAACCTCCAACGATTAGGTTTATATCTGAAGGAACTCTCGCAAGAAGATGTCAGTACACTGGGAGGACTGCCAGCCCTGCTCTCTCTCATTCTCTATGTGGAAGAAGTAATTACAGAGGAGGGAGGAAGGCTTAGGATCAGCAGCAGTTATGGATTCCCATCCTTGGAACGTATCCGAATCGGTGGGGAAAGTTGCAGGCTTGAGTTGACTTTTGAAATTGGGTGCTTGCCGAAGCTACAACAAATGAACCTCGAATGCATGGTAGCAGAAGAAAACTACACCAGCAGCAGTAATGTTGTGTTTGGCATAGAGCATCTGTCCCGCCTCACAACCATATATTGCTGTATTCATTACAAGTATGAAACCAGACTGGCCAAGGTGGCTATGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAACCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGAAGGCAAAATTTTTAATGTGGATCATTTCAAAGGCGTGGCTCTTGCTAAGGATAATCATGTTACAGCAAAATGGAAAGTTGGTAGGTAATGTGATTTTTTGCAATATGGATGAGGCAATACATTATTTGTTTCACTGCCCTTCTTTTTCTATGGCGGTCCCTTTACATTTTTTTTAATTTTTCTACCTTCAATAGTCAATACTGTCAGTAACATATTTGGAATTCGATGCAGAAGCTCAACAGAAGGCTCAATCATGCATGTTTTAAACAGCTTTCCCTAAGAAGGCAGTAACAGAATTCAATGGCGCCTGTTGAGCCAAGCAACAGAATTGCAGCAAATGGATCTCCCCCCTGGAGCTTTAAAAGCAGCCAATTTGACCTTTTCTTTTTGGGTTATTATAAGAAATTCAGGGTGCACACAAACACAATGGACGTAAATAGTCGGTGCTTTATTTATGATTTATGTATTGTATTTAAACCCTGGCAAGAATTGCTGTCAAAGCCTTT]

[+] EMBL CB634857             [ATATGTAAGCTAGGCAGAGACAACCTTCATTGTCTAACAATTCATATTTCATCTGTATCAGCAGATGACTTCATCCAGGAACCATGGTGCCCTCCTCCATTGAGTCTTCAAGAACTTGTCATCAATCAGGCGCCAATGTCTAGGGTTCCAAGATGGATTGGCTCACTTGTCAACCTCCAACGATTAGGTTTATATCTGAAGGAACTCTCGCAAGAAGATGTCAGTACACTGGGAGGACTGCCAGCCCTGCTCTCTCTCATTCTCTATGTGGAAGAAGTAATTACAGAGGAGGGAGGAAGGCTTAGGATCAGCAGCAGTTATGGATTCCCATCCTTGGAACGTATCCGAATCGGTGGGGAAAGTTGCAGGCTTGAGTTGACTTTTGAAATTGGGTGCTTGCCGAAGCTACAACAAATGAACCTCGAATGCATGGTAGCAGAAGAAAACTACACCAGCAGCAGTAATGTTGTGTTTGGCATAGAGCATCTGTCCCGCCTCACAACCATATATTGCTGTATTCATTACAAGTATGAAACCAGACTGGCCAAGGTGGCTATGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAACCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGAAGGCAAAATTTTTAATGTGGATCATTTCAAAGGCGTGGCTCTTGCTAAGGATAATCATGTTACAGCAAAATGGAAAGTTGGTAGGTAATGTGATTTTTTGCAATATGGATGAGGCAATACATTATTTG                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB634858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAGAAGAAAACTACACCAGCAGCAGTAATGTTGTGTTTGGCATAGAGCATCTGTCCCGCCTCACAACCATATATTGCTGTATTCATTACAAGTATGAAACCAGACTGGCCAAGGTGGCTATGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAACCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGAAGGCAAAATTTTTAATGTGGATCATTTCAAAGGCGTGGCTCTTGCTAAGGATAATCATGTTACAGCAAAATGGAAAGTTGGTAGGTAATGTGATTTTTTGCAATATGGATGAGGCAATACATTATTTGTTTCACTGCCCTTCTTTTTCTATGGCGGTCCCTTTACATTTTTTTTAATTTTTCTACCTTCAATAGTCAATACTGTCAGTAACATATTTGGAATTCGATGCAGAAGCTCAACAGAAGGCTCAATCATGCATGTTTTAAACAGCTTTCCCTAAGAAGGCAGTAACAGAATTCAATGGCGCCTGTTGAGCCAAGCAACAGAATTGCAGCAAATGGATCTCCCCCCTGGAGCTTTAAAAGCAGCCAATTTGACCTTTTCTTTTTGGGTTATTATAAGAAATTCAGGGTGCACACAAACACAATGGACGTAAATAGTCGGTGCTTTATTTATGATTTATGTATTGTATTTAAACCCTGGCAAGAATTGCTGTCAAAGCCTTT]




>consensus_3857#0
ATATGTAAGCTAGGCAGAGACAACCTTCATTGTCTAACAATTCATATTTCATCTGTATCA
GCAGATGACTTCATCCAGGAACCATGGTGCCCTCCTCCATTGAGTCTTCAAGAACTTGTC
ATCAATCAGGCGCCAATGTCTAGGGTTCCAAGATGGATTGGCTCACTTGTCAACCTCCAA
CGATTAGGTTTATATCTGAAGGAACTCTCGCAAGAAGATGTCAGTACACTGGGAGGACTG
CCAGCCCTGCTCTCTCTCATTCTCTATGTGGAAGAAGTAATTACAGAGGAGGGAGGAAGG
CTTAGGATCAGCAGCAGTTATGGATTCCCATCCTTGGAACGTATCCGAATCGGTGGGGAA
AGTTGCAGGCTTGAGTTGACTTTTGAAATTGGGTGCTTGCCGAAGCTACAACAAATGAAC
CTCGAATGCATGGTAGCAGAAGAAAACTACACCAGCAGCAGTAATGTTGTGTTTGGCATA
GAGCATCTGTCCCGCCTCACAACCATATATTGCTGTATTCATTACAAGTATGAAACCAGA
CTGGCCAAGGTGGCTATGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAA
CCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGAAGGCAAAAT
TTTTAATGTGGATCATTTCAAAGGCGTGGCTCTTGCTAAGGATAATCATGTTACAGCAAA
ATGGAAAGTTGGTAGGTAATGTGATTTTTTGCAATATGGATGAGGCAATACATTATTTGT
TTCACTGCCCTTCTTTTTCTATGGCGGTCCCTTTACATTTTTTTTAATTTTTCTACCTTC
AATAGTCAATACTGTCAGTAACATATTTGGAATTCGATGCAGAAGCTCAACAGAAGGCTC
AATCATGCATGTTTTAAACAGCTTTCCCTAAGAAGGCAGTAACAGAATTCAATGGCGCCT
GTTGAGCCAAGCAACAGAATTGCAGCAAATGGATCTCCCCCCTGGAGCTTTAAAAGCAGC
CAATTTGACCTTTTCTTTTTGGGTTATTATAAGAAATTCAGGGTGCACACAAACACAATG
GACGTAAATAGTCGGTGCTTTATTTATGATTTATGTATTGTATTTAAACCCTGGCAAGAA
TTGCTGTCAAAGCCTTT

clustalw multiple alignements is not computed in this case