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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3882 cluster # 3882       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3882#0 length = 550 sequences # 2  

consensusID : consensus_3882#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 550
fasta sequence
                              [TTGCTTGCACCTACATCAGGTTATTTTGAAAGAATATATTTGCAACTTAAAAATATCCACACCTACATGAATCATGAACGCCTGTTTCCGTATTAATATTCATTCATTAATTTTCGCTGTAGTATACACTTATATGTTGATGTGCTACATATTTGAATATGACTTCCAATATTCAATTTTTTTATTTTATTATCATACTTCATATATTAAGGGACGTTTCTATCGTTTGCACTTTGATTTTTTGCAGGTGCTCGATGCATTAGTTGCCCTTTTCTGCAGATCTAATGTATCTGCAGATGTTCGCTTAGTTGGTGGCTGGCTTTTCAGGCAACTGCTACCCCATGGAGAAGAAGAGTTCACTGCTTTTCATCTAAAATGGCTAAAGGATTCGCATAAGGATTACAGTATAAAACTTTTGGACGAATCTGGAGGATGCTGGCGGGACTTGCTTGTTCCTATTGTTAAAGAAGCCTGGAAGAATTGCAAGAAAGCAATCGAGACATCTTCACCACCTAAAGGATCCAAGTCTGCTATTTTACCCCTGGATTCA]

[+] EMBL CF306052             [TTGCTTGCACCTACATCAGGTTATTTTGAAAGAATATATTTGCAACTTAAAAATATCCACACCTACATGAATCATGAACGCCTGTTTCCGTATTAATATTCATTCATTAATTTTCGCTGTAGTATACACTTATATGTTGATGTGCTACATATTTGAATATGACTTCCAATATTCAATTTTTTTATTTTATTATCATACTTCATATATTAAGGGACGTTTCTATCGTTTGCACTTTGATTTTTTGCAGGTGCTCGATGCATTAGTTGCCCTTTTCTGCAGATCTAATGTATCTGCAGATGTTCGCTTAGTTGGTGGCTGGCTTTTCAGGCAACTGCTACCCCATGGAGAAGAAGAGTTCACTGCTTTTCATCTAAAATGGCTAAAGGATTCGCATAAGGATTACAGTATAAAACTTTTGGACGAATCTGGAGGATGCTGGCGGGACTTGCTTGTTCCTATTGTTAAAGAAGCCTGGAAGAATTGCAAGAAAGCAATCGAGACATCTTCACCACCTAAAGGATCCAAGTCTGCTATTTTACCCCTGGATTCA]
[+] EMBL CF305609             [TTGCTTGCATCTACATCAGGTTATTTTGAAAGAATATATTTGCAACTTAAAAATATCCACACCTACATGAATCATGAACGCCTGTTTCCGTATTAATATTCATTCATTAATTTTCGCTGTAGTATACACTTAGAGGTTGATGTGCTACATATTTGAATATGACTTCCAATATTCAAGCATTTTATTTTATTATCATACTTCATATATTAAGGGACGTTTCTATCGTTTGCACTTTGATTTTTTGCAGGTGCTCGATGCATTAGTTGCCCTTTTCTGCAGATCTAATGTATCTGCAGATGTTCGCTTAGTTGGTGGCTGGCTTTTCAGGCAACTGCTACCCCATGGAGAAGAAGAGTTCACTGCTTTTCATCTAAAATGGCTAAAGGATTCGCATAAGGATTACAGTATAAAACTTTTGGACGAATCTGGAGGATGCTGGCGGGACTTGCTTGTTCCTATTGTTAAAGAAGCCTGGAAGAATTGCAAGAAAGCAATCGAGACATCTTCACCACCTAAAGGATCCAAGTCTGCTATTTTACCCC        ]


>consensus_3882#0 TTGCTTGCACCTACATCAGGTTATTTTGAAAGAATATATTTGCAACTTAAAAATATCCAC ACCTACATGAATCATGAACGCCTGTTTCCGTATTAATATTCATTCATTAATTTTCGCTGT AGTATACACTTATATGTTGATGTGCTACATATTTGAATATGACTTCCAATATTCAATTTT TTTATTTTATTATCATACTTCATATATTAAGGGACGTTTCTATCGTTTGCACTTTGATTT TTTGCAGGTGCTCGATGCATTAGTTGCCCTTTTCTGCAGATCTAATGTATCTGCAGATGT TCGCTTAGTTGGTGGCTGGCTTTTCAGGCAACTGCTACCCCATGGAGAAGAAGAGTTCAC TGCTTTTCATCTAAAATGGCTAAAGGATTCGCATAAGGATTACAGTATAAAACTTTTGGA CGAATCTGGAGGATGCTGGCGGGACTTGCTTGTTCCTATTGTTAAAGAAGCCTGGAAGAA TTGCAAGAAAGCAATCGAGACATCTTCACCACCTAAAGGATCCAAGTCTGCTATTTTACC CCTGGATTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)