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Oryza sativa
cluster # 3908 cluster # 3908       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3908#0 length = 2930 sequences # 1  
consensus_3908#1 length = 397 sequences # 1  
consensus_3908#2 length = 296 sequences # 1  

consensusID : consensus_3908#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2930
fasta sequence
                              [CAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATAATTCAGATTTTGAGTGTATTTACAGATTTTTAATTAACCATTCACAATTGCTAGTAGCTGCTATCATAAGTTTGGACAACCTAAGGCTAATATAATAACCTCCACCAATCTTAGAGCACAAGTGCACAACCCTCTAAACCTACCAGATAAAAATCAACAAACTTGAAACCCATTATATCGAATCATGTCGACAGAATCATCCAGTTGTTGCCACTTGCCAGGTGATTGGGTAATCAACAGGAGCTATACAAGATTACAAGTGGAGGCTACTGATTGAATTTATCCCAAAAAGTTTTGCCCACAGAGGATTAATTAGTTGCAGTTGATCTCTTCGATCAAAACTAGGGCCGTTTGTCTTCAGCCTAATTGCCCACCACCCGTGTCCAAATTAAGCTCAAATCACATGGGCTAAAAGCATGGAAACCAAACATTTACATATGAGCGACTACTAATTTTGTGAAGGGTTTAAATATTTAAATTAGATCTGGTCCTGCAAGTCCCGCAAATTGTAGGATTAATTGGGCAAAGATAGTACTGCCCAAAGCATCAATCCAATATCAAAATCAAGATCATGATCTCCAAAAAATGGAAAAGATTAAACGTTAGTTGTTGGCACGTACTACCGTGGGCTCTGCTTCAATTTTGTTTCGATTATTTTTGTAGACTAAGTCACGTACGTGCAGACCATGACCTGCTCTCCCAACATTTGCAATATTTGACGAATTTAATTTTTCCGAGCCCTCTCTAAAATTGTCTGATTTGGATCAGAGCAAAGAAAAAAAAATAGTATTATCATAGTAAACGATATCACATTTCCTGAAAACAGAAAGGAGATTGCAGTTTTTCTCTGTGAAACAAAATTAATAAACTCGTTAATTTTCTCTAATCAGATTTTTTTTTGGCGAAATAATAAGCTCTGATGAGTGATTGGCTAGGTGGGAGAGAATATTTGAACGTGAAGGCGGGCTAGTGCACCGACCGACAGGTGGGCCACAATCTACCCGCGCCGGCCAAATGGATCCACCCTGTCGCAGCGCCAGTGCAGGCGGGCACGTTGGGTGTGTAGCCGGCAGGTAGCCAGCCCGGTCGTTAAGCCTAGCTTCGTCTCGTTTCCAACACTTTCCCGCGGAAAGAAAAAAAAAAGAAAAAACAGAGCACGAGAGAGCTGGAGAAGCCATGGCCATGGCAGGAAGGCGATGAGAAAGAGATAGGAAGCTGACCTGCCTCTCCGTCGGTCATGGCCGCGTTGTGACGGCGCCGGCGGCCGGAGGACGGGACGAAGCTACGCGCGCTGCGGCGGCGGCGGCGATCGACTGCTGGTGTTGATCAGGATTCAAGGGAGAGAAAGATAGATTGTTCATGGGGGAGCCAAACCAGAGGAGGTTGTACCAAGTCTGGCAGGGAAGCAACGTACGACACGATACGATCATCTCGCCTCTCTCTTCCTTCCATTACTTCTCTTTGAAAATCTTCTTGCAACCTGCAATTTTTGTTGTGATAATCCTTGTGAAATTCAGATCAATATTTTTTTTGTTTACACTTTGAGATGACAGACAGCTTTGCTTTCTCCATTTTTTTCTTTTTCAGAAATTTCTCTGCGGCGGACGCCTGATTTTCGGTCCGGATGCGGGTTCTCTGTTCCTGTCCACCGTGCTCATAGTGGCTCCTCTGGTAGGCCTATGCTGCCAATGCATCACAAAGATGAACTCGATCAGTTCAGAGAAACAAGTTCTTGGCCTCCCTGTCCTCATTGCCACCATCGTTCTTGGCCTAGCAGATTTGGCATTCCTGCTGATGACATCGAGCAGGGACCCGGGGATCGTGCCGAGGAACGCGCGGCCACCGGAGTCGTGCGGCGGCGGCGACGAGGAGGGGGTCGCCGGAGACGTGACGACGCCGTCGGCGGAGTGGGTGACGGCGGCGAGCCCTCACCTCCGGCTGCCGCGCAGCAAGGACGTGGTCGTGAACGGGTGCGTCGTGAAGGTGAAGTACTGCGACACGTGCCTGCTGTACAGGCCGCCACGTGCCTCCCACTGCTCCATCTGCAACAACTGCGTCCGCAAGTTCGACCACCACTGCCCCTGGGTCGGCCAGTGCATCGGTCTGCGGAATTACCGGTTCTTCTTCCTGTTCATCTCGACGTCGACCCTCCTCTGCGTCTACGTCTTCGTGGTGTCCTGGCTGAACATCGTGGCGCATAAGGACGGCAACGACGGCTCGCTGCTGAAATCCATGGCCGGTGAGCCGTTGTCCGTCGTGCTGATCGTGTACACCTTCGTCTCGGTGTGGTTTGTCGGCGGCCTCACCGTGTTCCACCTCTACCTCATGAGCACAAACCAGACAACGTACGAGAACTTCAGATATAGGTACGACAAGAAGGAGAACCCGTATAACAGGGGTGCTATATCGAACATAGCAGAGGTGTTCTGCGCTGGGATCCCGCCGTCGATGAACAACTTCCGGTCATGGGTGGCGCCGCCGCCGCTGGAGGAGCCGGACGACGTCAGCGGGCAGCTTCCGCCGAGGAACGGGGCCGATCTCACCGGCGGCGTGAAGGAGAAGGTGGACCTGGAGATGGGCCGCAACGGCGGCATCATCCCGGCGATCTTGCGGGGGCTGGACTACGACGAGATGGAGAAGAACGATGTCAGCGTGCATATCAAGGATCGGGGAGCGGCACCGGCAGCGCCGGACCCATTCATGGCCGGCCGGTGGCACAACGAGGACTGTGAGAGTACTCCGACGGCGGTGAGCCACCATGTAAATTCAGAACGATTATGACGTCCCCAGATGCCTCTAGTTGTTGCAAATTTAAATTATTCTTTTTGGGCGTTTTGGCTCTAAAGCAAGTTGGAGAAATCAGAAAAA]

[+] EMBL AK119444             [CAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATAATTCAGATTTTGAGTGTATTTACAGATTTTTAATTAACCATTCACAATTGCTAGTAGCTGCTATCATAAGTTTGGACAACCTAAGGCTAATATAATAACCTCCACCAATCTTAGAGCACAAGTGCACAACCCTCTAAACCTACCAGATAAAAATCAACAAACTTGAAACCCATTATATCGAATCATGTCGACAGAATCATCCAGTTGTTGCCACTTGCCAGGTGATTGGGTAATCAACAGGAGCTATACAAGATTACAAGTGGAGGCTACTGATTGAATTTATCCCAAAAAGTTTTGCCCACAGAGGATTAATTAGTTGCAGTTGATCTCTTCGATCAAAACTAGGGCCGTTTGTCTTCAGCCTAATTGCCCACCACCCGTGTCCAAATTAAGCTCAAATCACATGGGCTAAAAGCATGGAAACCAAACATTTACATATGAGCGACTACTAATTTTGTGAAGGGTTTAAATATTTAAATTAGATCTGGTCCTGCAAGTCCCGCAAATTGTAGGATTAATTGGGCAAAGATAGTACTGCCCAAAGCATCAATCCAATATCAAAATCAAGATCATGATCTCCAAAAAATGGAAAAGATTAAACGTTAGTTGTTGGCACGTACTACCGTGGGCTCTGCTTCAATTTTGTTTCGATTATTTTTGTAGACTAAGTCACGTACGTGCAGACCATGACCTGCTCTCCCAACATTTGCAATATTTGACGAATTTAATTTTTCCGAGCCCTCTCTAAAATTGTCTGATTTGGATCAGAGCAAAGAAAAAAAAATAGTATTATCATAGTAAACGATATCACATTTCCTGAAAACAGAAAGGAGATTGCAGTTTTTCTCTGTGAAACAAAATTAATAAACTCGTTAATTTTCTCTAATCAGATTTTTTTTTGGCGAAATAATAAGCTCTGATGAGTGATTGGCTAGGTGGGAGAGAATATTTGAACGTGAAGGCGGGCTAGTGCACCGACCGACAGGTGGGCCACAATCTACCCGCGCCGGCCAAATGGATCCACCCTGTCGCAGCGCCAGTGCAGGCGGGCACGTTGGGTGTGTAGCCGGCAGGTAGCCAGCCCGGTCGTTAAGCCTAGCTTCGTCTCGTTTCCAACACTTTCCCGCGGAAAGAAAAAAAAAAGAAAAAACAGAGCACGAGAGAGCTGGAGAAGCCATGGCCATGGCAGGAAGGCGATGAGAAAGAGATAGGAAGCTGACCTGCCTCTCCGTCGGTCATGGCCGCGTTGTGACGGCGCCGGCGGCCGGAGGACGGGACGAAGCTACGCGCGCTGCGGCGGCGGCGGCGATCGACTGCTGGTGTTGATCAGGATTCAAGGGAGAGAAAGATAGATTGTTCATGGGGGAGCCAAACCAGAGGAGGTTGTACCAAGTCTGGCAGGGAAGCAACGTACGACACGATACGATCATCTCGCCTCTCTCTTCCTTCCATTACTTCTCTTTGAAAATCTTCTTGCAACCTGCAATTTTTGTTGTGATAATCCTTGTGAAATTCAGATCAATATTTTTTTTGTTTACACTTTGAGATGACAGACAGCTTTGCTTTCTCCATTTTTTTCTTTTTCAGAAATTTCTCTGCGGCGGACGCCTGATTTTCGGTCCGGATGCGGGTTCTCTGTTCCTGTCCACCGTGCTCATAGTGGCTCCTCTGGTAGGCCTATGCTGCCAATGCATCACAAAGATGAACTCGATCAGTTCAGAGAAACAAGTTCTTGGCCTCCCTGTCCTCATTGCCACCATCGTTCTTGGCCTAGCAGATTTGGCATTCCTGCTGATGACATCGAGCAGGGACCCGGGGATCGTGCCGAGGAACGCGCGGCCACCGGAGTCGTGCGGCGGCGGCGACGAGGAGGGGGTCGCCGGAGACGTGACGACGCCGTCGGCGGAGTGGGTGACGGCGGCGAGCCCTCACCTCCGGCTGCCGCGCAGCAAGGACGTGGTCGTGAACGGGTGCGTCGTGAAGGTGAAGTACTGCGACACGTGCCTGCTGTACAGGCCGCCACGTGCCTCCCACTGCTCCATCTGCAACAACTGCGTCCGCAAGTTCGACCACCACTGCCCCTGGGTCGGCCAGTGCATCGGTCTGCGGAATTACCGGTTCTTCTTCCTGTTCATCTCGACGTCGACCCTCCTCTGCGTCTACGTCTTCGTGGTGTCCTGGCTGAACATCGTGGCGCATAAGGACGGCAACGACGGCTCGCTGCTGAAATCCATGGCCGGTGAGCCGTTGTCCGTCGTGCTGATCGTGTACACCTTCGTCTCGGTGTGGTTTGTCGGCGGCCTCACCGTGTTCCACCTCTACCTCATGAGCACAAACCAGACAACGTACGAGAACTTCAGATATAGGTACGACAAGAAGGAGAACCCGTATAACAGGGGTGCTATATCGAACATAGCAGAGGTGTTCTGCGCTGGGATCCCGCCGTCGATGAACAACTTCCGGTCATGGGTGGCGCCGCCGCCGCTGGAGGAGCCGGACGACGTCAGCGGGCAGCTTCCGCCGAGGAACGGGGCCGATCTCACCGGCGGCGTGAAGGAGAAGGTGGACCTGGAGATGGGCCGCAACGGCGGCATCATCCCGGCGATCTTGCGGGGGCTGGACTACGACGAGATGGAGAAGAACGATGTCAGCGTGCATATCAAGGATCGGGGAGCGGCACCGGCAGCGCCGGACCCATTCATGGCCGGCCGGTGGCACAACGAGGACTGTGAGAGTACTCCGACGGCGGTGAGCCACCATGTAAATTCAGAACGATTATGACGTCCCCAGATGCCTCTAGTTGTTGCAAATTTAAATTATTCTTTTTGGGCGTTTTGGCTCTAAAGCAAGTTGGAGAAATCAGAAAAA]


>consensus_3908#0 CAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAA TAATTCAGATTTTGAGTGTATTTACAGATTTTTAATTAACCATTCACAATTGCTAGTAGC TGCTATCATAAGTTTGGACAACCTAAGGCTAATATAATAACCTCCACCAATCTTAGAGCA CAAGTGCACAACCCTCTAAACCTACCAGATAAAAATCAACAAACTTGAAACCCATTATAT CGAATCATGTCGACAGAATCATCCAGTTGTTGCCACTTGCCAGGTGATTGGGTAATCAAC AGGAGCTATACAAGATTACAAGTGGAGGCTACTGATTGAATTTATCCCAAAAAGTTTTGC CCACAGAGGATTAATTAGTTGCAGTTGATCTCTTCGATCAAAACTAGGGCCGTTTGTCTT CAGCCTAATTGCCCACCACCCGTGTCCAAATTAAGCTCAAATCACATGGGCTAAAAGCAT GGAAACCAAACATTTACATATGAGCGACTACTAATTTTGTGAAGGGTTTAAATATTTAAA TTAGATCTGGTCCTGCAAGTCCCGCAAATTGTAGGATTAATTGGGCAAAGATAGTACTGC CCAAAGCATCAATCCAATATCAAAATCAAGATCATGATCTCCAAAAAATGGAAAAGATTA AACGTTAGTTGTTGGCACGTACTACCGTGGGCTCTGCTTCAATTTTGTTTCGATTATTTT TGTAGACTAAGTCACGTACGTGCAGACCATGACCTGCTCTCCCAACATTTGCAATATTTG ACGAATTTAATTTTTCCGAGCCCTCTCTAAAATTGTCTGATTTGGATCAGAGCAAAGAAA AAAAAATAGTATTATCATAGTAAACGATATCACATTTCCTGAAAACAGAAAGGAGATTGC AGTTTTTCTCTGTGAAACAAAATTAATAAACTCGTTAATTTTCTCTAATCAGATTTTTTT TTGGCGAAATAATAAGCTCTGATGAGTGATTGGCTAGGTGGGAGAGAATATTTGAACGTG AAGGCGGGCTAGTGCACCGACCGACAGGTGGGCCACAATCTACCCGCGCCGGCCAAATGG ATCCACCCTGTCGCAGCGCCAGTGCAGGCGGGCACGTTGGGTGTGTAGCCGGCAGGTAGC CAGCCCGGTCGTTAAGCCTAGCTTCGTCTCGTTTCCAACACTTTCCCGCGGAAAGAAAAA AAAAAGAAAAAACAGAGCACGAGAGAGCTGGAGAAGCCATGGCCATGGCAGGAAGGCGAT GAGAAAGAGATAGGAAGCTGACCTGCCTCTCCGTCGGTCATGGCCGCGTTGTGACGGCGC CGGCGGCCGGAGGACGGGACGAAGCTACGCGCGCTGCGGCGGCGGCGGCGATCGACTGCT GGTGTTGATCAGGATTCAAGGGAGAGAAAGATAGATTGTTCATGGGGGAGCCAAACCAGA GGAGGTTGTACCAAGTCTGGCAGGGAAGCAACGTACGACACGATACGATCATCTCGCCTC TCTCTTCCTTCCATTACTTCTCTTTGAAAATCTTCTTGCAACCTGCAATTTTTGTTGTGA TAATCCTTGTGAAATTCAGATCAATATTTTTTTTGTTTACACTTTGAGATGACAGACAGC TTTGCTTTCTCCATTTTTTTCTTTTTCAGAAATTTCTCTGCGGCGGACGCCTGATTTTCG GTCCGGATGCGGGTTCTCTGTTCCTGTCCACCGTGCTCATAGTGGCTCCTCTGGTAGGCC TATGCTGCCAATGCATCACAAAGATGAACTCGATCAGTTCAGAGAAACAAGTTCTTGGCC TCCCTGTCCTCATTGCCACCATCGTTCTTGGCCTAGCAGATTTGGCATTCCTGCTGATGA CATCGAGCAGGGACCCGGGGATCGTGCCGAGGAACGCGCGGCCACCGGAGTCGTGCGGCG GCGGCGACGAGGAGGGGGTCGCCGGAGACGTGACGACGCCGTCGGCGGAGTGGGTGACGG CGGCGAGCCCTCACCTCCGGCTGCCGCGCAGCAAGGACGTGGTCGTGAACGGGTGCGTCG TGAAGGTGAAGTACTGCGACACGTGCCTGCTGTACAGGCCGCCACGTGCCTCCCACTGCT CCATCTGCAACAACTGCGTCCGCAAGTTCGACCACCACTGCCCCTGGGTCGGCCAGTGCA TCGGTCTGCGGAATTACCGGTTCTTCTTCCTGTTCATCTCGACGTCGACCCTCCTCTGCG TCTACGTCTTCGTGGTGTCCTGGCTGAACATCGTGGCGCATAAGGACGGCAACGACGGCT CGCTGCTGAAATCCATGGCCGGTGAGCCGTTGTCCGTCGTGCTGATCGTGTACACCTTCG TCTCGGTGTGGTTTGTCGGCGGCCTCACCGTGTTCCACCTCTACCTCATGAGCACAAACC AGACAACGTACGAGAACTTCAGATATAGGTACGACAAGAAGGAGAACCCGTATAACAGGG GTGCTATATCGAACATAGCAGAGGTGTTCTGCGCTGGGATCCCGCCGTCGATGAACAACT TCCGGTCATGGGTGGCGCCGCCGCCGCTGGAGGAGCCGGACGACGTCAGCGGGCAGCTTC CGCCGAGGAACGGGGCCGATCTCACCGGCGGCGTGAAGGAGAAGGTGGACCTGGAGATGG GCCGCAACGGCGGCATCATCCCGGCGATCTTGCGGGGGCTGGACTACGACGAGATGGAGA AGAACGATGTCAGCGTGCATATCAAGGATCGGGGAGCGGCACCGGCAGCGCCGGACCCAT TCATGGCCGGCCGGTGGCACAACGAGGACTGTGAGAGTACTCCGACGGCGGTGAGCCACC ATGTAAATTCAGAACGATTATGACGTCCCCAGATGCCTCTAGTTGTTGCAAATTTAAATT ATTCTTTTTGGGCGTTTTGGCTCTAAAGCAAGTTGGAGAAATCAGAAAAA



consensusID : consensus_3908#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence
                              [CTCGAGCAGGTGGACGACGGCGGCNTACCAGGTGAGCTTCGAGAATCGCCAGCGTGCGGCGCCGGCGCCGGCGCCGGGGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTGGTCCGACGGCGCGCACTCCGTCCGGACGCCGTTCGCGGTTAATGTCATCTGATTGGTGTCTCTCTCTCTCTCTCTNNGNNTCTCTCTATCTCTCTCTTTTTTTTTTTCATTTTCATTTTATTTTTGATTGCTGAATTCCATTTTTTTTCTTGCCTTTTGTGAGTGTATGGTTTTAGGGTCAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATAATTCAGATTTTGAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029428             [CTCGAGCAGGTGGACGACGGCGGCNTACCAGGTGAGCTTCGAGAATCGCCAGCGTGCGGCGCCGGCGCCGGCGCCGGGGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTGGTCCGACGGCGCGCACTCCGTCCGGACGCCGTTCGCGGTTAATGTCATCTGATTGGTGTCTCTCTCTCTCTCTCTNNGNNTCTCTCTATCTCTCTCTTTTTTTTTTTCATTTTCATTTTATTTTTGATTGCTGAATTCCATTTTTTTTCTTGCCTTTTGTGAGTGTATGGTTTTAGGGTCAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATAATTCAGATTTTGAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_3908#1 CTCGAGCAGGTGGACGACGGCGGCNTACCAGGTGAGCTTCGAGAATCGCCAGCGTGCGGC GCCGGCGCCGGCGCCGGGGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTGGTCCGAC GGCGCGCACTCCGTCCGGACGCCGTTCGCGGTTAATGTCATCTGATTGGTGTCTCTCTCT CTCTCTCTNNGNNTCTCTCTATCTCTCTCTTTTTTTTTTTCATTTTCATTTTATTTTTGA TTGCTGAATTCCATTTTTTTTCTTGCCTTTTGTGAGTGTATGGTTTTAGGGTCAGTCTTG GATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATAATTCAG ATTTTGAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_3908#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence
                              [CGGAGCGGCTGGTGTTCTCGAGCAGGTGGACGACGGCGGCGTACCAGGTGAGCTTCGAGATCGCCATCGNGCNCCGGCGCGGCNNGCNGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTNGTCCTACGGCGCGCACTCCGTCCGGACGCNTTCGCGGTTAATGTCATCTGATTGGTGTCTCTCTCTCTCTCTCTCTCTACTCTCTATCTCTCTCTTTTTTTTTTTAATTTTTCATTTTATTTTTGATTGCTGAATTCNATNTTTTTTCTTGCCTTTTGTNAGTTATGGTTAAG]

[+] EMBL C74087               [CGGAGCGGCTGGTGTTCTCGAGCAGGTGGACGACGGCGGCGTACCAGGTGAGCTTCGAGATCGCCATCGNGCNCCGGCGCGGCNNGCNGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTNGTCCTACGGCGCGCACTCCGTCCGGACGCNTTCGCGGTTAATGTCATCTGATTGGTGTCTCTCTCTCTCTCTCTCTCTACTCTCTATCTCTCTCTTTTTTTTTTTAATTTTTCATTTTATTTTTGATTGCTGAATTCNATNTTTTTTCTTGCCTTTTGTNAGTTATGGTTAAG]


>consensus_3908#2 CGGAGCGGCTGGTGTTCTCGAGCAGGTGGACGACGGCGGCGTACCAGGTGAGCTTCGAGA TCGCCATCGNGCNCCGGCGCGGCNNGCNGCGAGCAAGGGGTACGTGCACGGCGCCGTCAC CTNGTCCTACGGCGCGCACTCCGTCCGGACGCNTTCGCGGTTAATGTCATCTGATTGGTG TCTCTCTCTCTCTCTCTCTCTACTCTCTATCTCTCTCTTTTTTTTTTTAATTTTTCATTT TATTTTTGATTGCTGAATTCNATNTTTTTTCTTGCCTTTTGTNAGTTATGGTTAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CAGTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAA 60
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TAATTCAGATTTTGAGTGTATTTACAGATTTTTAATTAACCATTCACAATTGCTAGTAGC 120
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TGCTATCATAAGTTTGGACAACCTAAGGCTAATATAATAACCTCCACCAATCTTAGAGCA 180
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CAAGTGCACAACCCTCTAAACCTACCAGATAAAAATCAACAAACTTGAAACCCATTATAT 240
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CGAATCATGTCGACAGAATCATCCAGTTGTTGCCACTTGCCAGGTGATTGGGTAATCAAC 300
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AGGAGCTATACAAGATTACAAGTGGAGGCTACTGATTGAATTTATCCCAAAAAGTTTTGC 360
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CCACAGAGGATTAATTAGTTGCAGTTGATCTCTTCGATCAAAACTAGGGCCGTTTGTCTT 420
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CAGCCTAATTGCCCACCACCCGTGTCCAAATTAAGCTCAAATCACATGGGCTAAAAGCAT 480
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      GGAAACCAAACATTTACATATGAGCGACTACTAATTTTGTGAAGGGTTTAAATATTTAAA 540
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TTAGATCTGGTCCTGCAAGTCCCGCAAATTGTAGGATTAATTGGGCAAAGATAGTACTGC 600
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CCAAAGCATCAATCCAATATCAAAATCAAGATCATGATCTCCAAAAAATGGAAAAGATTA 660
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AACGTTAGTTGTTGGCACGTACTACCGTGGGCTCTGCTTCAATTTTGTTTCGATTATTTT 720
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TGTAGACTAAGTCACGTACGTGCAGACCATGACCTGCTCTCCCAACATTTGCAATATTTG 780
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      ACGAATTTAATTTTTCCGAGCCCTCTCTAAAATTGTCTGATTTGGATCAGAGCAAAGAAA 840
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AAAAAATAGTATTATCATAGTAAACGATATCACATTTCCTGAAAACAGAAAGGAGATTGC 900
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AGTTTTTCTCTGTGAAACAAAATTAATAAACTCGTTAATTTTCTCTAATCAGATTTTTTT 960
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TTGGCGAAATAATAAGCTCTGATGAGTGATTGGCTAGGTGGGAGAGAATATTTGAACGTG 1020
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AAGGCGGGCTAGTGCACCGACCGACAGGTGGGCCACAATCTACCCGCGCCGGCCAAATGG 1080
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      ATCCACCCTGTCGCAGCGCCAGTGCAGGCGGGCACGTTGGGTGTGTAGCCGGCAGGTAGC 1140
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CAGCCCGGTCGTTAAGCCTAGCTTCGTCTCGTTTCCAACACTTTCCCGCGGAAAGAAAAA 1200
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AAAAAGAAAAAACAGAGCACGAGAGAGCTGGAGAAGCCATGGCCATGGCAGGAAGGCGAT 1260
                                                                                  

consensus_3908#1      ---------------------------------------------------------CTC 3
consensus_3908#2      -----------------------------------------CGGAGCGGCTGGTGTTCTC 19
consensus_3908#0      GAGAAAGAGATAGGAAGCTGACCTGCCTCTCCGTCGGTCATGGCCGCGTTGTGACGGCGC 1320
                                                                               * *

consensus_3908#1      GAGCAGGTGGACGACGGCGGCNTACCAGGTGAGCTTCGAGAA---TCGCCAGCGTGCGGC 60
consensus_3908#2      GAGCAGGTGGACGACGGCGGCGTACCAGGTGAGCTTCGAGA----TCGCCATCGNGCNCC 75
consensus_3908#0      CGGCGGCCGGAGGACGGGACGAAGCTACGCGCGCTGCGGCGGCGGCGGCGATCGACTGCT 1380
                        ** *  *** *****       * * * * *** **         ** * **      

consensus_3908#1      GCCGGCG-CCGGCGCCGGGGCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTGGTCCGA 119
consensus_3908#2      GGCGCGG-CNNGCN-----GCGAGCAAGGGGTACGTGCACGGCGCCGTCACCTNGTCCTA 129
consensus_3908#0      GGTGTTGATCAGGATTCAAGGGAGAGAAAGATAGATTGTTCATGGGGGAGCCAAACCAGA 1440
                      *  *  *    *       * ***  *  * **  *       *  *   **    *  *

consensus_3908#1      CGGCGC-GCACTCCGTCCGG-ACGCCGTTCGCGGTTAATGTCATCTGATTGGT--GTCTC 175
consensus_3908#2      CGGCGC-GCACTCCGTCCGG-ACGCN-TTCGCGGTTAATGTCATCTGATTGGT--GTCTC 184
consensus_3908#0      GGAGGTTGTACCAAGTCTGGCAGGGAAGCAACGTACGACACGATACGATCATCTCGCCTC 1500
                       *  *  * **   *** ** * *       **    *    **  ***      * ***

consensus_3908#1      TCTCTCTCTCTCTNNGNNTCTCTCTATCTCTCTCTTTTTTTTTTTCATTTT-CATTTTAT 234
consensus_3908#2      TCTCTCTCTCTCTCTCTA-CTCTCTATCTCTCTCTTTTTTTTTTTAATTTTTCATTTTAT 243
consensus_3908#0      TCTCTTCCTTCCATTACTTCTCTTTGAAAATCTTCTTGCAACCTGCAATTTTTGTTGTGA 1560
                      *****  **  *       **** *     ***  **      *  * ***   ** *  

consensus_3908#1      TTTTGATTGCTGAATTCCATTTTTTTTCTTGCCTTTTGTGAGTGTATGGTTTTAGGGTCA 294
consensus_3908#2      TTTTGATTGCTGAATTCNATNTTTTTTCTTGCCTTTTGTNAGT-TATGGTTAAG------ 296
consensus_3908#0      TAATCCTTGTGAAATTCAGATCAATATTTTTTTTGTTTACACTTTGAGATGACAGACAGC 1620
                      *  *  ***   *****       * * **   * **   * * *  * *          

consensus_3908#1      GTCTTGGATCTCGAAGTATGGTGTTGAGTGTCCTTCCTTTTTTTGGAAAAGCAAGGAATA 354
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TTTGCTTTCTCCATTTTTTTCTTTTTCAGAAATTTCTCTGCGGCGGACGCCTGATTTTCG 1680
                                                                                  

consensus_3908#1      ATTCAGATTTTGAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAA----------------- 397
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      GTCCGGATGCGGGTTCTCTGTTCCTGTCCACCGTGCTCATAGTGGCTCCTCTGGTAGGCC 1740
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TATGCTGCCAATGCATCACAAAGATGAACTCGATCAGTTCAGAGAAACAAGTTCTTGGCC 1800
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCCCTGTCCTCATTGCCACCATCGTTCTTGGCCTAGCAGATTTGGCATTCCTGCTGATGA 1860
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CATCGAGCAGGGACCCGGGGATCGTGCCGAGGAACGCGCGGCCACCGGAGTCGTGCGGCG 1920
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      GCGGCGACGAGGAGGGGGTCGCCGGAGACGTGACGACGCCGTCGGCGGAGTGGGTGACGG 1980
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CGGCGAGCCCTCACCTCCGGCTGCCGCGCAGCAAGGACGTGGTCGTGAACGGGTGCGTCG 2040
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TGAAGGTGAAGTACTGCGACACGTGCCTGCTGTACAGGCCGCCACGTGCCTCCCACTGCT 2100
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CCATCTGCAACAACTGCGTCCGCAAGTTCGACCACCACTGCCCCTGGGTCGGCCAGTGCA 2160
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCGGTCTGCGGAATTACCGGTTCTTCTTCCTGTTCATCTCGACGTCGACCCTCCTCTGCG 2220
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCTACGTCTTCGTGGTGTCCTGGCTGAACATCGTGGCGCATAAGGACGGCAACGACGGCT 2280
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CGCTGCTGAAATCCATGGCCGGTGAGCCGTTGTCCGTCGTGCTGATCGTGTACACCTTCG 2340
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCTCGGTGTGGTTTGTCGGCGGCCTCACCGTGTTCCACCTCTACCTCATGAGCACAAACC 2400
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AGACAACGTACGAGAACTTCAGATATAGGTACGACAAGAAGGAGAACCCGTATAACAGGG 2460
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      GTGCTATATCGAACATAGCAGAGGTGTTCTGCGCTGGGATCCCGCCGTCGATGAACAACT 2520
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCCGGTCATGGGTGGCGCCGCCGCCGCTGGAGGAGCCGGACGACGTCAGCGGGCAGCTTC 2580
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      CGCCGAGGAACGGGGCCGATCTCACCGGCGGCGTGAAGGAGAAGGTGGACCTGGAGATGG 2640
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      GCCGCAACGGCGGCATCATCCCGGCGATCTTGCGGGGGCTGGACTACGACGAGATGGAGA 2700
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      AGAACGATGTCAGCGTGCATATCAAGGATCGGGGAGCGGCACCGGCAGCGCCGGACCCAT 2760
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      TCATGGCCGGCCGGTGGCACAACGAGGACTGTGAGAGTACTCCGACGGCGGTGAGCCACC 2820
                                                                                  

consensus_3908#1      ------------------------------------------------------------
consensus_3908#2      ------------------------------------------------------------
consensus_3908#0      ATGTAAATTCAGAACGATTATGACGTCCCCAGATGCCTCTAGTTGTTGCAAATTTAAATT 2880
                                                                                  

consensus_3908#1      --------------------------------------------------
consensus_3908#2      --------------------------------------------------
consensus_3908#0      ATTCTTTTTGGGCGTTTTGGCTCTAAAGCAAGTTGGAGAAATCAGAAAAA 2930
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)