cluster # 3910

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Oryza sativa
cluster # 3910 cluster # 3910 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3910#0 length = 1082 sequences # 3
consensusID : consensus_3910#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1082
fasta sequence
                              [TTCACACATTCACCAGCCTCACTCTCACAACTCATACTCCTCCTTCTGAACCTATCTTGTTTGTCCTCTGGAAGTTGAGTAGAGGAAGAGAGGAACAGACAACAGAAACAAGCAAGCATCTTGGTGGTTGTTTTGGATACATATACAAGCAGGGTGCAAGTGCAAGAATTGGTGATCTGAATCCTGAATCAAAGTTGAGGGAATCACTAGGATCAATCAATCAATTCCAAGAGGCTTAGCTGAAGCAGATGATGAGGATGGACAAGCTTGTGAGGCAATGTGACATGGAGGTGATGAAGATGGCCATGCTCAAGCATGAGGAGACCTTCAGGCAGCA-GGTTCATGAGCTGCATCGCCTGTACCGAATTCAGAGGCAGCTGATGAGCGACCTGACCATGGCCGAGCTGAGCTCCGGCCACCGCCGCCGGCAGCCTCGCCGGAGCAGCAAGCAACCTCGCCGCGCGCTGAACCTGCAGCTCCCCGCCGACGAGTACATCGTCAGCGCCGACGCCGCCGACGACAACGACGACACGGCCGAGCTGGACCTCACTCTCGCCGTCGGCGGCGGCCGCAGCTCCCGCAAGTGCAACGCCGCCATTGCCGCCGCCGCCGCCGCAGGTGGCTCCTCCCCCTTCGCCTCCGACTGCTCCGGCAGCGGCCTCTCGTCGTCGCCGTCGTCGGCCGAGTACTCCGACGGCGCCGCCATGTTCCTCCACGCGCCGCCGCCCATGCCGCCGCCGTGCCAGCGTGCAATGGCGTTCGACCTCGCCATGGGCGACGCCATGAAGCAGCAGCAGTCGCCATGGCTGGTTCAGTGCCAGTATCTCAGCCTCAGGATGACATGAACAGCAAGAGCAAGCTCAAGCTCAAGCTCAAGCTGTCCATGATCACACTGTGCTACTACTACTCTAGCTTAATTATCTTGTGTTTGTAGAAGAAGAAGAGAAGAAGAACAAGAAGAAGCTAGCCACTAGCTTAATCATTTCCTCTCCCACTGTTAATTAATCAATTATTTGTTCTAGCTAGGTGATCAGTGCAGTTTGGGCAGGGGGGATTAAGTCCTAATCCTGAATTCCTGATCC]

[+] EMBL AK108584             [TTCACACATTCACCAGCCTCACTCTCACAACTCATACTCCTCCTTCTGAACCTATCTTGTTTGTCCTCTGGAAGTTGAGTAGAGGAAGAGAGGAACAGACAACAGAAACAAGCAAGCATCTTGGTGGTTGTTTTGGATACATATACAAGCAGGGTGCAAGTGCAAGAATTGGTGATCTGAATCCTGAATCAAAGTTGAGGGAATCACTAGGATCAATCAATCAATTCCAAGAGGCTTAGCTGAAGCAGATGATGAGGATGGACAAGCTTGTGAGGCAATGTGACATGGAGGTGATGAAGATGGCCATGCTCAAGCATGAGGAGACCTTCAGGCAGCA GGTTCATGAGCTGCATCGCCTGTACCGAATTCAGAGGCAGCTGATGAGCGACCTGACCATGGCCGAGCTGAGCTCCGGCCACCGCCGCCGGCAGCCTCGCCGGAGCAGCAAGCAACCTCGCCGCGCGCTGAACCTGCAGCTCCCCGCCGACGAGTACATCGTCAGCGCCGACGCCGCCGACGACAACGACGACACGGCCGAGCTGGACCTCACTCTCGCCGTCGGCGGCGGCCGCAGCTCCCGCAAGTGCAACGCCGCCATTGCCGCCGCCGCCGCCGCAGGTGGCTCCTCCCCCTTCGCCTCCGACTGCTCCGGCAGCGGCCTCTCGTCGTCGCCGTCGTCGGCCGAGTACTCCGACGGCGCCGCCATGTTCCTCCACGCGCCGCCGCCCATGCCGCCGCCGTGCCAGCGTGCAATGGCGTTCGACCTCGCCATGGGCGACGCCATGAAGCAGCAGCAGTCGCCATGGCTGGTTCAGTGCCAGTATCTCAGCCTCAGGATGACATGAACAGCAAGAGCAAGCTCAAGCTCAAGCTCAAGCTGTCCATGATCACACTGTGCTACTACTACTCTAGCTTAATTATCTTGTGTTTGTAGAAGAAGAAGAGAAGAAGAACAAGAAGAAGCTAGCCACTAGCTTAATCATTTCCTCTCCCACTGTTAATTAATCAATTATTTGTTCTAGCTAGGTGATCAGTGCAGTTTGGGCAGGGGGGATTAAGTCCTAATCCTGAATTCCTGATCC]
[+] EMBL C74308               [                        TCACAACTCATACTCCTCCTTCTGAACCTATCTTGTTTGTCCTCTGGAAGTTGAGTAGAGGAAGAGAGGAACAGACAACAGAAACAAGCAAGCATCTTGGTGGTTGTTTTGGATACATATACA   AGGGTGCAAGTGCAAGAATTGGTGATCTGAATCCTGAATCAAAGTTGAGGGAATCACTAGGATCAATCAATCAATTCCAAGAGGCTTAGCTGAAGCAGATGATGAGGATGGACAAGCTTGTGAGGCAATGTGACATGGAGGTGATGAAGATGGCCATGCTCAAGCATGAGGAGACCTTCANGCAGCAGGGTTCATGAGCTGCATCGCCTGTACCGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU076138             [                                                                                                                                                                                                     AGGGAATCACTAGGATCAATCAATCAATTCCAAGAGGCTTAGCTGAAGCAGATGATGAGGATGGACAAGCTTGTGAGGCAATGTGACATGGAGGTGATGAAGATGGCCATGCTCAAGCATGAGGAGACCTTCAGGCAGCA GGTTCATGAGCTGCATCGCCTGTACCGAATTCAGAGGCAGCTGATGAGCGACCTGACCATGGCCGAGCTGAGCTCCGGCCACCGCCGCCGGCAGCCTCGCCGGAGCAGCAAGCAACCTCGCCGCGCGCTGAACCTGCAGCTCCCCGCCGACGAGTACATCGTCAGCGCCGACGCCGCCGACGACAACGACGACACGGCCGAGCTGGACCTCACTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_3910#0
TTCACACATTCACCAGCCTCACTCTCACAACTCATACTCCTCCTTCTGAACCTATCTTGT
TTGTCCTCTGGAAGTTGAGTAGAGGAAGAGAGGAACAGACAACAGAAACAAGCAAGCATC
TTGGTGGTTGTTTTGGATACATATACAAGCAGGGTGCAAGTGCAAGAATTGGTGATCTGA
ATCCTGAATCAAAGTTGAGGGAATCACTAGGATCAATCAATCAATTCCAAGAGGCTTAGC
TGAAGCAGATGATGAGGATGGACAAGCTTGTGAGGCAATGTGACATGGAGGTGATGAAGA
TGGCCATGCTCAAGCATGAGGAGACCTTCAGGCAGCAGGTTCATGAGCTGCATCGCCTGT
ACCGAATTCAGAGGCAGCTGATGAGCGACCTGACCATGGCCGAGCTGAGCTCCGGCCACC
GCCGCCGGCAGCCTCGCCGGAGCAGCAAGCAACCTCGCCGCGCGCTGAACCTGCAGCTCC
CCGCCGACGAGTACATCGTCAGCGCCGACGCCGCCGACGACAACGACGACACGGCCGAGC
TGGACCTCACTCTCGCCGTCGGCGGCGGCCGCAGCTCCCGCAAGTGCAACGCCGCCATTG
CCGCCGCCGCCGCCGCAGGTGGCTCCTCCCCCTTCGCCTCCGACTGCTCCGGCAGCGGCC
TCTCGTCGTCGCCGTCGTCGGCCGAGTACTCCGACGGCGCCGCCATGTTCCTCCACGCGC
CGCCGCCCATGCCGCCGCCGTGCCAGCGTGCAATGGCGTTCGACCTCGCCATGGGCGACG
CCATGAAGCAGCAGCAGTCGCCATGGCTGGTTCAGTGCCAGTATCTCAGCCTCAGGATGA
CATGAACAGCAAGAGCAAGCTCAAGCTCAAGCTCAAGCTGTCCATGATCACACTGTGCTA
CTACTACTCTAGCTTAATTATCTTGTGTTTGTAGAAGAAGAAGAGAAGAAGAACAAGAAG
AAGCTAGCCACTAGCTTAATCATTTCCTCTCCCACTGTTAATTAATCAATTATTTGTTCT
AGCTAGGTGATCAGTGCAGTTTGGGCAGGGGGGATTAAGTCCTAATCCTGAATTCCTGAT
CC
clustalw multiple alignements is not computed in this case