cluster # 3925

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Oryza sativa
cluster # 3925 cluster # 3925 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3925#0 length = 1847 sequences # 3
consensusID : consensus_3925#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1847
fasta sequence
                              [AATAGCTGCGGCCACCGCCGCCGCCGCCGCCGCCTTGGTCACCAAATCCGCCTACGGCGGCGCCGGCGGTGGGGGGCATCGTCATGGCGTCGCCGAGCAGCCGCGCGGTGGCCGTCGGCGGCGCGCTCCTCCTGCTCCTCGTCTTCGCCGTCCCAACCACCTTCCTCTACCTCACCTCCGCCCCCGCCGCCTCCTCCCCGAGCCTCCTCCTCAACCTCAAGCCGTTCGGCGCCCGGTGCGCGCCCGCCGCCGCCGCCGCCCCGCCGCTCAGGGTCTTCATGTACGACCTGCCACGGCGGTTCCACGTCGGCATGATGGACGCCTCCGCCTCGGGGTTCCCCGCGTGGCCGCCGTCGGCGGGCGGGATCAGGCGGCAGCACAGCGTGGAGTACTGGATGATGGCGTCGCTGCAGGGCGGGGGAGGTGGGGGGAACGGGTCGTCGTCGGAGGAGGGGAGGGAGGCGGTGCGGGTGACGGATCCCGACGCGGCGGAGGCCTTCTTCGTGCCCTTCTTCTCGTCGCTCAGCTTCAACGTCCACGGCCGCAACATGACCGATCCAGAGACCGAGGCCGACCGCCTCCTCCAGGTTGAGCTTATGGAGATTTTATGGAAATCTAAATATTGGCAACGATCTGCAGGCCGTGATCATGTGATTCCCATGCATCACCCAAATGCTTTTAGGTTTTTGCGTGATATGGTGAATGCATCTATTCTTATAGTTGCAGACTTTGGAAGATACACAAAAGAATTGGCTTCCTTGAGGAAAGATGTTGTAGCTCCATATGTGCATGTTGTAGATTCCTTCCTTAACGATGATCCACCTGATCCATTTGATGATCGTCCTACACTGCTTTTCTTTCGAGGGCGTACAGTCAGGAAAGATGAAGGGAAGATCCGTGCTAAACTTGCCAAGATTCTAAAAGGGAAGGATGGTGTGCGCTTTGAGGATAGCCTTGCAACAGGTGAAGGCATTAAAACATCTACGGAAGGCATGCGATCATCAAAGTTTTGTCTCCATCCTGCTGGGGATACTCCTTCCTCGTGCCGACTGTTTGATGCAATTGTCAGTCATTGTGTTCCTGTGATTGTCAGCAGTCGGATTGAGCTCCCTTTCGAAGATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCTCAGTGGAAGAAGCTCTAAGACCTGATTATTTGCTCAACCAGCTCAGACAGATCCAGAAAACGAAGTGGGTTGAGATCTGGTCAAAGCTAAAAAATGTCTCTCATCACTATGAATTCCAGAATCCACCCAGGAAGGGTGATGCTGTGAACATGATATGGAGGCAGGTGAAGCACAAAGTCCCTGCAGTTAATCTTGCGATTCACAGGAATAGGAGATTAAAAATTCCAGACTGGTGGGGATGAACCTTGGTGAATTGTGTATATATTATCATATCGATGGGGCGACGGCTGAAGTGACATTTTTTGGGATGTATATGATGAAGTCATGCTGGTCATTCCTTGTGCACCATCAAAATCAAAATGGGTCCGAGTCTCATTCCACGCAGGTTTACTGACGCACTAACATTTTTGTCCCC-TTTTTTGTTCCTTCTATGACATCCTAACTATTTTTTTCCTCTGATTTTTACGATATAGTGGAAGCAAATAAGTTGTATTAATGTTGTAGAGCAGATTTTCATCTGACAATACAAAGACACAAAGCACCTATGTTACATATCGGTCTATCGGATGTTGCAATGTATTCCCATTAGATACCACTCCTCTCTGTGATTGATACTTTTGTGTACCTTTTAGTTCTAGGAAGTTTCGTTATGTGTAAATATTTCGTCTCATAGCTTAATCATTTTGCTGGTT]

[+] EMBL AK119614             [AATAGCTGCGGCCACCGCCGCCGCCGCCGCCGCCTTGGTCACCAAATCCGCCTACGGCGGCGCCGGCGGTGGGGGGCATCGTCATGGCGTCGCCGAGCAGCCGCGCGGTGGCCGTCGGCGGCGCGCTCCTCCTGCTCCTCGTCTTCGCCGTCCCAACCACCTTCCTCTACCTCACCTCCGCCCCCGCCGCCTCCTCCCCGAGCCTCCTCCTCAACCTCAAGCCGTTCGGCGCCCGGTGCGCGCCCGCCGCCGCCGCCGCCCCGCCGCTCAGGGTCTTCATGTACGACCTGCCACGGCGGTTCCACGTCGGCATGATGGACGCCTCCGCCTCGGGGTTCCCCGCGTGGCCGCCGTCGGCGGGCGGGATCAGGCGGCAGCACAGCGTGGAGTACTGGATGATGGCGTCGCTGCAGGGCGGGGGAGGTGGGGGGAACGGGTCGTCGTCGGAGGAGGGGAGGGAGGCGGTGCGGGTGACGGATCCCGACGCGGCGGAGGCCTTCTTCGTGCCCTTCTTCTCGTCGCTCAGCTTCAACGTCCACGGCCGCAACATGACCGATCCAGAGACCGAGGCCGACCGCCTCCTCCAGGTTGAGCTTATGGAGATTTTATGGAAATCTAAATATTGGCAACGATCTGCAGGCCGTGATCATGTGATTCCCATGCATCACCCAAATGCTTTTAGGTTTTTGCGTGATATGGTGAATGCATCTATTCTTATAGTTGCAGACTTTGGAAGATACACAAAAGAATTGGCTTCCTTGAGGAAAGATGTTGTAGCTCCATATGTGCATGTTGTAGATTCCTTCCTTAACGATGATCCACCTGATCCATTTGATGATCGTCCTACACTGCTTTTCTTTCGAGGGCGTACAGTCAGGAAAGATGAAGGGAAGATCCGTGCTAAACTTGCCAAGATTCTAAAAGGGAAGGATGGTGTGCGCTTTGAGGATAGCCTTGCAACAGGTGAAGGCATTAAAACATCTACGGAAGGCATGCGATCATCAAAGTTTTGTCTCCATCCTGCTGGGGATACTCCTTCCTCGTGCCGACTGTTTGATGCAATTGTCAGTCATTGTGTTCCTGTGATTGTCAGCAGTCGGATTGAGCTCCCTTTCGAAGATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCTCAGTGGAAGAAGCTCTAAGACCTGATTATTTGCTCAACCAGCTCAGACAGATCCAGAAAACGAAGTGGGTTGAGATCTGGTCAAAGCTAAAAAATGTCTCTCATCACTATGAATTCCAGAATCCACCCAGGAAGGGTGATGCTGTGAACATGATATGGAGGCAGGTGAAGCACAAAGTCCCTGCAGTTAATCTTGCGATTCACAGGAATAGGAGATTAAAAATTCCAGACTGGTGGGGATGAACCTTGGTGAATTGTGTATATATTATCATATCGATGGGGCGACGGCTGAAGTGACATTTTTTGGGATGTATATGATGAAGTCATGCTGGTCATTCCTTGTGCACCATCAAAATCAAAATGGGTCCGAGTCTCATTCCACGCAGGTTTACTGACGCACTAACATTTTTGTCCCC TTTTTTGTCCCTTCTATGACATCCTAACTATTTTTTTCCTCTGATTTTTACGATATAGTGGAAGCAAATAAGTTGTATTAATGTTGTAGAGCAGATTTTCATCTGACAATACAAAGACACAAAGCACCTATGTTACATATCGGTCTATCGGATGTTGCAATGTATTCCCATTAGATACCACTCCTCTCTGTGATTGATACTTTTGTGTACCTTTTAGTTCTAGGAAGTTTCGTTATGTGTAAATATTTCGTCTCATAGCTTAATCATTTTGCTGGTT]
[+] EMBL AK106015             [   AGCTGCGGCCACCGCCGCCGCCGCCGCCGCCTTGGTCACCAAATCCGCCTACGGCGGCGCCGGCGGTGGGGGGCATCGTCATGGCGTCGCCGAGCAGCCGCGCGGTGGCCGTCGGCGGCGCGCTCCTCCTGCTCCTCGTCTTCGCCGTCCCAACCACCTTCCTCTACCTCACCTCCGCCCCCGCCGCCTCCTCCCCGAGCCTCCTCCTCAACCTCAAGCCGTTCGGCGCCCGGTGCGCGCCCGCCGCCGCCGCCGCCCCGCCGCTCAGGGTCTTCATGTACGACCTGCCACGGCGGTTCCACGTCGGCATGATGGACGCCTCCGCCTCGGGGTTCCCCGCGTGGCCGCCGTCGGCGGGCGGGATCAGGCGGCAGCACAGCGTGGAGTACTGGATGATGGCGTCGCTGCAGGGCGGGGGAGGTGGGGGGAACGGGTCGTCGTCGGAGGAGGGGAGGGAGGCGGTGCGGGTGACGGATCCCGACGCGGCGGAGGCCTTCTTCGTGCCCTTCTTCTCGTCGCTCAGCTTCAACGTCCACGGCCGCAACATGACCGATCCAGAGACCGAGGCCGACCGCCTCCTCCAGGTTGAGCTTATGGAGATTTTATGGAAATCTAAATATTGGCAACGATCTGCAGGCCGTGATCATGTGATTCCCATGCATCACCCAAATGCTTTTAGGTTTTTGCGTGATATGGTGAATGCATCTATTCTTATAGTTGCAGACTTTGGAAGATACACAAAAGAATTGGCTTCCTTGAGGAAAGATGTTGTAGCTCCATATGTGCATGTTGTAGATTCCTTCCTTAACGATGATCCACCTGATCCATTTGATGATCGTCCTACACTGCTTTTCTTTCGAGGGCGTACAGTCAGGAAAGATGAAGGGAAGATCCGTGCTAAACTTGCCAAGATTCTAAAAGGGAAGGATGGTGTGCGCTTTGAGGATAGCCTTGCAACAGGTGAAGGCATTAAAACATCTACGGAAGGCATGCGATCATCAAAGTTTTGTCTCCATCCTGCTGGGGATACTCCTTCCTCGTGCCGACTGTTTGATGCAATTGTCAGTCATTGTGTTCCTGTGATTGTCAGCAGTCGGATTGAGCTCCCTTTCGAAGATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCTCAGTGGAAGAAGCTCTAAGACCTGATTATTTGCTCAACCAGCTCAGACAGATCCAGAAAACGAAGTGGGTTGAGATCTGGTCAAAGCTAAAAAATGTCTCTCATCACTATGAATTCCAGAATCCACCCAGGAAGGGTGATGCTGTGAACATGATATGGAGGCAGGTGAAGCACAAAGTCCCTGCAGTTAATCTTGCGATTCACAGGAATAGGAGATTAAAAATTCCAGACTGGTGGGGATGAACCTTGGTGAATTGTGTATATATTATCATATCGATGGGGCGACGGCTGAAGTGACATTTTTTGGGATGTATATGATGAAGTCATGCTGGTCATTCCTTGTGCACCATCAAAATCAAAATGGGTCCGAGTCTCATTCCACGCAGGTTTACTGACGCACTAACATTTTTGTCCCC TTTTTTGTTCCTTCTATGACATCCTAACTATTTTTTTCCTCTGATTTTTACGATATAGTGGAAGCAAATAAGTTGTATTAATGTTGTAGAGCAGATTTTCATCTGACAATACAAAGACACAAAGCA                                                                                                                                                       ]
[-] EMBL CB625052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCCTTCCTCGTGCCGACTGTTTGATGCAATTTTCAGTCATTGTGTTCCTGTGATTGTCAGCAGTCGGATTGAGCTCCCTTTCGAAGATGAGATTGATTACAGTGAGTTCTCCCTTTTCTTCTCAGTGGAAGAAGCTCTAAGACCTGATTATTTGCTCAACCAGCTCAGACAGATCCAGAAAACGAAGTGGGTTGAGATCTGGTCAAAGCTAAAAAATGTCTCTCATCACTATGAATTCCAGAATCCACCCAGGAAGGGTGATGCTGTGAACATGATATGGAGGCAGGTGAAGCACAAAGTCCCTGCAGTTAATCTTGCGATTCACAGGAATAGGAGATTAAAAATTCCAGACTGGTGGGGATGAACCTTGGTGAATTGTGTATATATTATCATATCGATGGGGCGACGGCTGAAGTGACATTTTTTGGGATGTATATGATGAAGTCATGCTGGTCATTCCTTGTGCACCATCAAAATCAAAATGGGTCCGAGTCTCATTCCACGCAGGTTTACTGACGCACTAACATTTTTGTCCCCTTTTTTTGTTCCTTCTATGACATCCTAACTATTTTTTTCCTCTGATTTTTGCGATATAGTGGAAGCAAATAATTTG GGGAATCTTNTAGAGCAGATTTTCATCTCACAATACA                                                                                                                                                                    ]




>consensus_3925#0
AATAGCTGCGGCCACCGCCGCCGCCGCCGCCGCCTTGGTCACCAAATCCGCCTACGGCGG
CGCCGGCGGTGGGGGGCATCGTCATGGCGTCGCCGAGCAGCCGCGCGGTGGCCGTCGGCG
GCGCGCTCCTCCTGCTCCTCGTCTTCGCCGTCCCAACCACCTTCCTCTACCTCACCTCCG
CCCCCGCCGCCTCCTCCCCGAGCCTCCTCCTCAACCTCAAGCCGTTCGGCGCCCGGTGCG
CGCCCGCCGCCGCCGCCGCCCCGCCGCTCAGGGTCTTCATGTACGACCTGCCACGGCGGT
TCCACGTCGGCATGATGGACGCCTCCGCCTCGGGGTTCCCCGCGTGGCCGCCGTCGGCGG
GCGGGATCAGGCGGCAGCACAGCGTGGAGTACTGGATGATGGCGTCGCTGCAGGGCGGGG
GAGGTGGGGGGAACGGGTCGTCGTCGGAGGAGGGGAGGGAGGCGGTGCGGGTGACGGATC
CCGACGCGGCGGAGGCCTTCTTCGTGCCCTTCTTCTCGTCGCTCAGCTTCAACGTCCACG
GCCGCAACATGACCGATCCAGAGACCGAGGCCGACCGCCTCCTCCAGGTTGAGCTTATGG
AGATTTTATGGAAATCTAAATATTGGCAACGATCTGCAGGCCGTGATCATGTGATTCCCA
TGCATCACCCAAATGCTTTTAGGTTTTTGCGTGATATGGTGAATGCATCTATTCTTATAG
TTGCAGACTTTGGAAGATACACAAAAGAATTGGCTTCCTTGAGGAAAGATGTTGTAGCTC
CATATGTGCATGTTGTAGATTCCTTCCTTAACGATGATCCACCTGATCCATTTGATGATC
GTCCTACACTGCTTTTCTTTCGAGGGCGTACAGTCAGGAAAGATGAAGGGAAGATCCGTG
CTAAACTTGCCAAGATTCTAAAAGGGAAGGATGGTGTGCGCTTTGAGGATAGCCTTGCAA
CAGGTGAAGGCATTAAAACATCTACGGAAGGCATGCGATCATCAAAGTTTTGTCTCCATC
CTGCTGGGGATACTCCTTCCTCGTGCCGACTGTTTGATGCAATTGTCAGTCATTGTGTTC
CTGTGATTGTCAGCAGTCGGATTGAGCTCCCTTTCGAAGATGAGATTGATTACAGTGAGT
TCTCCCTTTTCTTCTCAGTGGAAGAAGCTCTAAGACCTGATTATTTGCTCAACCAGCTCA
GACAGATCCAGAAAACGAAGTGGGTTGAGATCTGGTCAAAGCTAAAAAATGTCTCTCATC
ACTATGAATTCCAGAATCCACCCAGGAAGGGTGATGCTGTGAACATGATATGGAGGCAGG
TGAAGCACAAAGTCCCTGCAGTTAATCTTGCGATTCACAGGAATAGGAGATTAAAAATTC
CAGACTGGTGGGGATGAACCTTGGTGAATTGTGTATATATTATCATATCGATGGGGCGAC
GGCTGAAGTGACATTTTTTGGGATGTATATGATGAAGTCATGCTGGTCATTCCTTGTGCA
CCATCAAAATCAAAATGGGTCCGAGTCTCATTCCACGCAGGTTTACTGACGCACTAACAT
TTTTGTCCCCTTTTTTGTTCCTTCTATGACATCCTAACTATTTTTTTCCTCTGATTTTTA
CGATATAGTGGAAGCAAATAAGTTGTATTAATGTTGTAGAGCAGATTTTCATCTGACAAT
ACAAAGACACAAAGCACCTATGTTACATATCGGTCTATCGGATGTTGCAATGTATTCCCA
TTAGATACCACTCCTCTCTGTGATTGATACTTTTGTGTACCTTTTAGTTCTAGGAAGTTT
CGTTATGTGTAAATATTTCGTCTCATAGCTTAATCATTTTGCTGGTT
clustalw multiple alignements is not computed in this case