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Oryza sativa
cluster # 395 cluster # 395       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_395#0 length = 3311 sequences # 1  
 consensus_395#1 length = 540 sequences # 1  
consensusID : consensus_395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3311
fasta sequence 
                              [CTCACTTTGAATCGCGAACCACTACGGCCGCCGCCGCCGCCGCCGCCACCGCCACCACGGCCTCCGCCCCCCCCATTCGGTGACCATCGGGCGCATAGCTGTCCTCCTCACCTCTCGCCTCCTGATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCCCTCCCCTCTCCTTCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCTCCTCCCGCACCGGAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAGCGAGACTACAACGTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTCGCTGTCTTTGCTGAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCCAACGTGCTGTGCTATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAGGCCCTCAAGGCGTTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAAAACATCCTGATCAAGATGCACGCAAGGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATCCACAAGAGCGGGGTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGCCGGGCAGGTAAGATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGCCGCCCGATGGTGCAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATCGTGGAGGCCAAGCTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTCACATACAATGTTCTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAGGTTTTAATGGAAAGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATATATGAATGGCCTCTGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATGTTAGGTGAGGGATTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGCCATTCCTCAAGACTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGGTATGCTGGTGTTGTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGGAGGGGTATTATGAAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGGACGTTCAACATTTTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGCTTGATCCATAGTCTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGGTTTTACTACCATGGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAGAATATTGCTCCAGATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGGAAATTTGATGCAGCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGATGTTCTTACTGTCCTTCTCAACAGGCTTGTTTATGCTGATAATATGGGAAATCAATCGCATATTTGATGGAAAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACATTCTGTAGGGTTGGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGATGCGATGTTGAAAAGGAAGTAAACTGAAGCCTTGTGGATCTAGGAAACATATCGGTTACTGTAGGCAAGATGAGAACAGGCGGGAAGCATTTGACTGGCTTTATCATTTAAGCTGCTTAAAAATGGATCTGTGGTGCAAAAAGCCAAGACCAAGCACATACTATTGGTAAATTGGAACTATTGATTTGTTCTGGGTAGAAGAGAAGTGAATTGAAATCCATTAAAGTAAATGTGGAAGTCCTGCGAAGAAAGGAGTTTGTTAAGAGGCCATAAGGCAGGTGTGGGCTATGGGTTTGTCATTGGTGTTGCCCTTCTGCTTTTATGCTGTATATCATTTTACGTTGGAGTTCACTTTGTGCACATTACACAATGGAATATCAGACTGTGAGTTCCCTTGCTTGGGATTTCAACAGAGTGCAAGATGCATTACTGCCCTCCTTTAGGATTTTCATTTGGAAATCAATGATTGCTGCAAGGTCTGAGGTAGGAAGGCACTAAGGACACATGGAGGGAATTTATAACAGCAGCAGACACCAAGCCATTGAAAACCATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAATGAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAGTGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATGGATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTGCTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTTACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAACAAGCCAGCAACACACTCACCCCTCCCTAAGCCCTACAGTCCTACACTACCTCCATGTTCGCTCCCTCAGAAGCACCGTTTTAATGTAGTCCACACCCAGCCTACATGGACAGGAGCAACTGATGTGGTATTCTTTGCCCTCTAGTGATGCAGGATCAAGGTGAATTTAAGCGAAGGTGCATATAAGCACAACCTGTAACAGTGTTCTGCTGCTATTTCATGGTTATGTAACCACGCAATAGTTCTTTAGTTATGTAACCAAGAAATTGTGAAACACATGAATGAGCTTTCAATAGCTCAATTCTGAGGGTGTCAGTGGTGCTGCAAACAGTAACAAATGAAGGCATACTTTGGAGCTTAGCCGGAGCTTCACAGAGCTAGGTCTATGGCCCTTGCGGCTCAAGTGGTCTTGTTTTTCTGTTTTTAAGTGTTTAGGGTGGGGAGTTTCTGGATTCTCCTCCTATGTGTATCTTCTTCTTAGTAATGAAATGATGTGCATATCTTTAGTTTGTTCGGAAAGAAAAAATAGTTCTTTGCCCCAAAAGCAAAAAAAAAAAGTAGTTCCTATTTGACGAGAGACATTCTCTGGCTGCCAATAAGAAAAGTTAGTA]

[+] EMBL AK121840             [CTCACTTTGAATCGCGAACCACTACGGCCGCCGCCGCCGCCGCCGCCACCGCCACCACGGCCTCCGCCCCCCCCATTCGGTGACCATCGGGCGCATAGCTGTCCTCCTCACCTCTCGCCTCCTGATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCCCTCCCCTCTCCTTCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCTCCTCCCGCACCGGAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAGCGAGACTACAACGTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTCGCTGTCTTTGCTGAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCCAACGTGCTGTGCTATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAGGCCCTCAAGGCGTTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAAAACATCCTGATCAAGATGCACGCAAGGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATCCACAAGAGCGGGGTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGCCGGGCAGGTAAGATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGCCGCCCGATGGTGCAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATCGTGGAGGCCAAGCTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTCACATACAATGTTCTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAGGTTTTAATGGAAAGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATATATGAATGGCCTCTGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATGTTAGGTGAGGGATTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGCCATTCCTCAAGACTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGGTATGCTGGTGTTGTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGGAGGGGTATTATGAAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGGACGTTCAACATTTTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGCTTGATCCATAGTCTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGGTTTTACTACCATGGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAGAATATTGCTCCAGATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGGAAATTTGATGCAGCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGATGTTCTTACTGTCCTTCTCAACAGGCTTGTTTATGCTGATAATATGGGAAATCAATCGCATATTTGATGGAAAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACATTCTGTAGGGTTGGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGATGCGATGTTGAAAAGGAAGTAAACTGAAGCCTTGTGGATCTAGGAAACATATCGGTTACTGTAGGCAAGATGAGAACAGGCGGGAAGCATTTGACTGGCTTTATCATTTAAGCTGCTTAAAAATGGATCTGTGGTGCAAAAAGCCAAGACCAAGCACATACTATTGGTAAATTGGAACTATTGATTTGTTCTGGGTAGAAGAGAAGTGAATTGAAATCCATTAAAGTAAATGTGGAAGTCCTGCGAAGAAAGGAGTTTGTTAAGAGGCCATAAGGCAGGTGTGGGCTATGGGTTTGTCATTGGTGTTGCCCTTCTGCTTTTATGCTGTATATCATTTTACGTTGGAGTTCACTTTGTGCACATTACACAATGGAATATCAGACTGTGAGTTCCCTTGCTTGGGATTTCAACAGAGTGCAAGATGCATTACTGCCCTCCTTTAGGATTTTCATTTGGAAATCAATGATTGCTGCAAGGTCTGAGGTAGGAAGGCACTAAGGACACATGGAGGGAATTTATAACAGCAGCAGACACCAAGCCATTGAAAACCATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAATGAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAGTGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATGGATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTGCTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTTACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAACAAGCCAGCAACACACTCACCCCTCCCTAAGCCCTACAGTCCTACACTACCTCCATGTTCGCTCCCTCAGAAGCACCGTTTTAATGTAGTCCACACCCAGCCTACATGGACAGGAGCAACTGATGTGGTATTCTTTGCCCTCTAGTGATGCAGGATCAAGGTGAATTTAAGCGAAGGTGCATATAAGCACAACCTGTAACAGTGTTCTGCTGCTATTTCATGGTTATGTAACCACGCAATAGTTCTTTAGTTATGTAACCAAGAAATTGTGAAACACATGAATGAGCTTTCAATAGCTCAATTCTGAGGGTGTCAGTGGTGCTGCAAACAGTAACAAATGAAGGCATACTTTGGAGCTTAGCCGGAGCTTCACAGAGCTAGGTCTATGGCCCTTGCGGCTCAAGTGGTCTTGTTTTTCTGTTTTTAAGTGTTTAGGGTGGGGAGTTTCTGGATTCTCCTCCTATGTGTATCTTCTTCTTAGTAATGAAATGATGTGCATATCTTTAGTTTGTTCGGAAAGAAAAAATAGTTCTTTGCCCCAAAAGCAAAAAAAAAAAGTAGTTCCTATTTGACGAGAGACATTCTCTGGCTGCCAATAAGAAAAGTTAGTA]




>consensus_395#0
CTCACTTTGAATCGCGAACCACTACGGCCGCCGCCGCCGCCGCCGCCACCGCCACCACGG
CCTCCGCCCCCCCCATTCGGTGACCATCGGGCGCATAGCTGTCCTCCTCACCTCTCGCCT
CCTGATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCCCTCCCCTC
TCCTTCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCTCCTCCCGC
ACCGGAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAGCGAGACTA
CAACGTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTCGCTGTCTT
TGCTGAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCCAACGTGCT
GTGCTATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAGGCCCTCAA
GGCGTTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAAAACATCCT
GATCAAGATGCACGCAAGGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATCCACAAGA
GCGGGGTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGCCGGGCAG
GTAAGATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGCCGCCCGA
TGGTGCAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATCGTGGAGG
CCAAGCTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTCACATACA
ATGTTCTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAGGTTTTAA
TGGAAAGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATATATGAATG
GCCTCTGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATGTTAGGTG
AGGGATTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGCCATTCCT
CAAGACTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGGTATGCTG
GTGTTGTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGGAGGGGTA
TTATGAAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGGACGTTCA
ACATTTTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGCTTGATCC
ATAGTCTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGGTTTTACT
ACCATGGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAGAATATTG
CTCCAGATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGGAAATTTG
ATGCAGCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGATGTTCTTA
CTGTCCTTCTCAACAGGCTTGTTTATGCTGATAATATGGGAAATCAATCGCATATTTGAT
GGAAAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACATTCTGTAGG
GTTGGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGATGCGATGTTG
AAAAGGAAGTAAACTGAAGCCTTGTGGATCTAGGAAACATATCGGTTACTGTAGGCAAGA
TGAGAACAGGCGGGAAGCATTTGACTGGCTTTATCATTTAAGCTGCTTAAAAATGGATCT
GTGGTGCAAAAAGCCAAGACCAAGCACATACTATTGGTAAATTGGAACTATTGATTTGTT
CTGGGTAGAAGAGAAGTGAATTGAAATCCATTAAAGTAAATGTGGAAGTCCTGCGAAGAA
AGGAGTTTGTTAAGAGGCCATAAGGCAGGTGTGGGCTATGGGTTTGTCATTGGTGTTGCC
CTTCTGCTTTTATGCTGTATATCATTTTACGTTGGAGTTCACTTTGTGCACATTACACAA
TGGAATATCAGACTGTGAGTTCCCTTGCTTGGGATTTCAACAGAGTGCAAGATGCATTAC
TGCCCTCCTTTAGGATTTTCATTTGGAAATCAATGATTGCTGCAAGGTCTGAGGTAGGAA
GGCACTAAGGACACATGGAGGGAATTTATAACAGCAGCAGACACCAAGCCATTGAAAACC
ATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAAT
GAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAG
TGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAG
GAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATG
GATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTG
CTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTT
ACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAA
CAAGCCAGCAACACACTCACCCCTCCCTAAGCCCTACAGTCCTACACTACCTCCATGTTC
GCTCCCTCAGAAGCACCGTTTTAATGTAGTCCACACCCAGCCTACATGGACAGGAGCAAC
TGATGTGGTATTCTTTGCCCTCTAGTGATGCAGGATCAAGGTGAATTTAAGCGAAGGTGC
ATATAAGCACAACCTGTAACAGTGTTCTGCTGCTATTTCATGGTTATGTAACCACGCAAT
AGTTCTTTAGTTATGTAACCAAGAAATTGTGAAACACATGAATGAGCTTTCAATAGCTCA
ATTCTGAGGGTGTCAGTGGTGCTGCAAACAGTAACAAATGAAGGCATACTTTGGAGCTTA
GCCGGAGCTTCACAGAGCTAGGTCTATGGCCCTTGCGGCTCAAGTGGTCTTGTTTTTCTG
TTTTTAAGTGTTTAGGGTGGGGAGTTTCTGGATTCTCCTCCTATGTGTATCTTCTTCTTA
GTAATGAAATGATGTGCATATCTTTAGTTTGTTCGGAAAGAAAAAATAGTTCTTTGCCCC
AAAAGCAAAAAAAAAAAGTAGTTCCTATTTGACGAGAGACATTCTCTGGCTGCCAATAAG
AAAAGTTAGTA

consensusID : consensus_395#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 540
fasta sequence 
                              [TTTCTTTATTTTTGTTTTTTTTAAATTATTGATCGGTATGGTGATGCGGTACTTTTTACATATGTTGGTTCCACAGACACCAAGCCATTGAAAACCATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAATGAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAGTGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATGGATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTGCTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTTACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAACAAGCCAGCAACACACTCACCCCT]

[-] EMBL CK085354             [TTTCTTTATTTTTGTTTTTTTTAAATTATTGATCGGTATGGTGATGCGGTACTTTTTACATATGTTGGTTCCACAGACACCAAGCCATTGAAAACCATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAATGAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAGTGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATGGATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTGCTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTTACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAACAAGCCAGCAACACACTCACCCCT]




>consensus_395#1
TTTCTTTATTTTTGTTTTTTTTAAATTATTGATCGGTATGGTGATGCGGTACTTTTTACA
TATGTTGGTTCCACAGACACCAAGCCATTGAAAACCATCCCAAATTTGGGGCCAGAGTTG
AAATGTGCATATTTTAATGAGCTGAGGGACCAAAATGAACGATTTTACAATTGAGGACCA
TGCCCTCAGCAACACACAGGCGCATATGAGTGGCAGTGGTGTGGAGATGCCTATTCCGCT
GGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAGGAAGAGGAGCAGGATGAAGGTTGC
AAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATGGATAGGAAGAAGCAGAGGGCTCAC
TGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTGCTGCCTCCTCCCAACCGCCACAGC
CAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTTACCCTTCGGTGCTTCCCATTCCTT
TGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAACAAGCCAGCAACACACTCACCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_395#0      CTCACTTTGAATCGCGAACCACTACGGCCGCCGCCGCCGCCGCCGCCACCGCCACCACGG 60
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CCTCCGCCCCCCCCATTCGGTGACCATCGGGCGCATAGCTGTCCTCCTCACCTCTCGCCT 120
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CCTGATGCGCGGGCGCATGGCCTCCTCGGCCTCCGCCGCGGCTCTCCTGCCCCTCCCCTC 180
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TCCTTCCTGCTCCTCCTCGGAGGACTCCGACGACGGAAAGCACCTCCCGTCTCCTCCCGC 240
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ACCGGAGGCGAACACCCCGCCTACGCAGCAGCAGAAGCGGCGGCGGCTGGAGCGAGACTA 300
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CAACGTGGCCATGAAAGCCCTGGCGCTCGCCGGCGACTTGGACGAGGTGGTCGCTGTCTT 360
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGCTGAGCTAAAGCGGACTGCCGCCGACGGTGGTGATGGCGGCGCGCCGCCCAACGTGCT 420
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTGCTATAACACGCTCGTCAATGCGCTCGCGGAGGCCGGTCGCGAGGGGGAGGCCCTCAA 480
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GGCGTTCGATGAAATGCTCGCGTCGGGTGTAGCGCCCAACGCGTCGTCACAAAACATCCT 540
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GATCAAGATGCACGCAAGGGCGGTCGGAGTTTGACCTTGCTTGGGAGCTTATCCACAAGA 600
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GCGGGGTGGAGCCTGACGTTGGTACGTACTCAACGCTCATCGCGGGCCTGTGCCGGGCAG 660
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTAAGATCGTTGAGGCGTGGGGCGTGCTTGACTGGATGCTGGAGAAGAACTGCCGCCCGA 720
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGGTGCAGACTTACACGCCCATAGTACAAGCATATTGCCGCGATGGCCGCATCGTGGAGG 780
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CCAAGCTGCTGATGGCCGAGATGGAACGTCTTGGCTGCCTTCCCAACGTCGTCACATACA 840
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ATGTTCTAATCAGGGCCTTGTGTGATGATGACAAATTTGATGAAGTTGAACAGGTTTTAA 900
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGGAAAGTAGTACCAAAGATTGGAAGCCCAGTACGGTCACGTACAATATATATATGAATG 960
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GCCTCTGCAAGAAAGGTAAGGCTAAGGAAGCACTTGAGCTGTTGGATGTTATGTTAGGTG 1020
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AGGGATTGGAACCCACAGCTTATACTTGGAGTATTCTTCTGAATTGCCTTTGCCATTCCT 1080
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CAAGACTTTTGGATGCTATATACTTGTTAGAGAGGAGCACAGAGTTGAAATGGTATGCTG 1140
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTGTTGTTGCATACAACACTGTAATGAGCAGTTTGTGTGAGATGGGCAAATGGAGGGGTA 1200
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TTATGAAGCTATTAACAGATATGATCAAAAAAGGTATCGAGCCAAACACAAGGACGTTCA 1260
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ACATTTTGATTCGTAGTCTTTGTGTTGGGGGAAAGTCCTCCTTAGCCAAGAGCTTGATCC 1320
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ATAGTCTAGGATTTGCTGCAAATGTGGTGACATACAATATACTCCTTCATTGGTTTTACT 1380
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ACCATGGAAAGTTAACTGAAGCGAATCGCTTAATTTCAGTAATGGAGGAAAAGAATATTG 1440
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CTCCAGATGAAGTCACCTATACTATAATAATTGATGGATTATGCAGAGAAAGGAAATTTG 1500
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ATGCAGCTACTGCTTGTTTTCTTAAATCACTTACAAGTGGGCTATCGATGGATGTTCTTA 1560
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CTGTCCTTCTCAACAGGCTTGTTTATGCTGATAATATGGGAAATCAATCGCATATTTGAT 1620
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GGAAAAGATTTTGTCCCTGATCATCATGTTTTTGACCTTACAATTAGAACATTCTGTAGG 1680
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTTGGCTATTGTCACTATAGAACTTTTTATAAGCTAAACCTTATTCTGGATGCGATGTTG 1740
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AAAAGGAAGTAAACTGAAGCCTTGTGGATCTAGGAAACATATCGGTTACTGTAGGCAAGA 1800
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGAGAACAGGCGGGAAGCATTTGACTGGCTTTATCATTTAAGCTGCTTAAAAATGGATCT 1860
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTGGTGCAAAAAGCCAAGACCAAGCACATACTATTGGTAAATTGGAACTATTGATTTGTT 1920
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CTGGGTAGAAGAGAAGTGAATTGAAATCCATTAAAGTAAATGTGGAAGTCCTGCGAAGAA 1980
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AGGAGTTTGTTAAGAGGCCATAAGGCAGGTGTGGGCTATGGGTTTGTCATTGGTGTTGCC 2040
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      CTTCTGCTTTTATGCTGTATATCATTTTACGTTGGAGTTCACTTTGTGCACATTACACAA 2100
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGGAATATCAGACTGTGAGTTCCCTTGCTTGGGATTTCAACAGAGTGCAAGATGCATTAC 2160
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGCCCTCCTTTAGGATTTTCATTTGGAAATCAATGATTGCTGCAAGGTCTGAGGTAGGAA 2220
consensus_395#1      ----TTTCTTTATTTTTGTTTTTTTTAAATTATTGATCGGTAT---------GGTGATGC 47
                          * *****   ** *  ***  **** * **** * *           ***     

consensus_395#0      GGCACTAAGGACACATGGAGGGAATTTATAACAGCAGCAGACACCAAGCCATTGAAAACC 2280
consensus_395#1      GGTACTTTTTACATATGTTGG----TTCCA-------CAGACACCAAGCCATTGAAAACC 96
                     ** ***    *** ***  **    **  *       ***********************

consensus_395#0      ATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAAT 2340
consensus_395#1      ATCCCAAATTTGGGGCCAGAGTTGAAATGTGCATATTTTAATGAGCTGAGGGACCAAAAT 156
                     ************************************************************

consensus_395#0      GAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAG 2400
consensus_395#1      GAACGATTTTACAATTGAGGACCATGCCCTCAGCAACACACAGGCGCATATGAGTGGCAG 216
                     ************************************************************

consensus_395#0      TGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAG 2460
consensus_395#1      TGGTGTGGAGATGCCTATTCCGCTGGTGAAGAGGAATAGGATGAGGAGGAACAGGTCTAG 276
                     ************************************************************

consensus_395#0      GAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATG 2520
consensus_395#1      GAAGAGGAGCAGGATGAAGGTTGCAAGGAGGACAGGAGCAAATGAAGGAATCCAGCGATG 336
                     ************************************************************

consensus_395#0      GATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTG 2580
consensus_395#1      GATAGGAAGAAGCAGAGGGCTCACTGCTGCATCTCCTCCTGTTCATCGCCACTGTCACTG 396
                     ************************************************************

consensus_395#0      CTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTT 2640
consensus_395#1      CTGCCTCCTCCCAACCGCCACAGCCAAAGCCTTCTATCTCTCCCCATCTCCACCCCTCTT 456
                     ************************************************************

consensus_395#0      ACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAA 2700
consensus_395#1      ACCCTTCGGTGCTTCCCATTCCTTTGCCAAAGTCTGCACCATTGAGGCCAAGGCCAGGAA 516
                     ************************************************************

consensus_395#0      CAAGCCAGCAACACACTCACCCCTCCCTAAGCCCTACAGTCCTACACTACCTCCATGTTC 2760
consensus_395#1      CAAGCCAGCAACACACTCACCCCT------------------------------------ 540
                     ************************                                    

consensus_395#0      GCTCCCTCAGAAGCACCGTTTTAATGTAGTCCACACCCAGCCTACATGGACAGGAGCAAC 2820
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TGATGTGGTATTCTTTGCCCTCTAGTGATGCAGGATCAAGGTGAATTTAAGCGAAGGTGC 2880
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ATATAAGCACAACCTGTAACAGTGTTCTGCTGCTATTTCATGGTTATGTAACCACGCAAT 2940
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AGTTCTTTAGTTATGTAACCAAGAAATTGTGAAACACATGAATGAGCTTTCAATAGCTCA 3000
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      ATTCTGAGGGTGTCAGTGGTGCTGCAAACAGTAACAAATGAAGGCATACTTTGGAGCTTA 3060
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GCCGGAGCTTCACAGAGCTAGGTCTATGGCCCTTGCGGCTCAAGTGGTCTTGTTTTTCTG 3120
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      TTTTTAAGTGTTTAGGGTGGGGAGTTTCTGGATTCTCCTCCTATGTGTATCTTCTTCTTA 3180
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      GTAATGAAATGATGTGCATATCTTTAGTTTGTTCGGAAAGAAAAAATAGTTCTTTGCCCC 3240
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AAAAGCAAAAAAAAAAAGTAGTTCCTATTTGACGAGAGACATTCTCTGGCTGCCAATAAG 3300
consensus_395#1      ------------------------------------------------------------
                                                                                 

consensus_395#0      AAAAGTTAGTA 3311
consensus_395#1      -----------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)