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Oryza sativa
cluster # 3970 cluster # 3970       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3970#0 length = 3638 sequences # 2  
 consensus_3970#1 length = 665 sequences # 1  
consensusID : consensus_3970#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3638
fasta sequence 
                              [ATCACCATTTTTGCTTTGCGACACCGTACGTCCATGTTGCCCCAAACAACTCCGCTTAATTTGCATTGACGATCACTTCTGCCACCAGGGGAAGTGGAGATCCATCTCGATCGATCGATAGATATGGGTTAGATTTGTTTTGTGGAGCTTCTTTTACTTGTCCTTGGAGATAGACAGGAATTCATCATGCGTCGGGAGCGCATTGATGCGACTAGTGTTGAGGCGGCGGTAGAATCACTAATCCCTTACTTGGAGGATACCAGCAGTGCTGCACATAAGTCCATCTACTTTGACGGATGGGATGGACTGGGTGCGTCTGCGGTGCTCAGAGCGATAGCAGAAAATCCAGCGCCATCTCTGAGGAAGAAATTTGACAGGATTATCCATGTTGACTGCTCGAGATGGAAGAAACGAAGGCAACTGCAAAGAGCGATCGCTGATCAACTCAAGCTTCCTCAGCATGTAATGGATTTGTTTGATAGGCAGGATGAGGAGGATGATTTCAGCGGGGTTGAAGAAAGCTCCAGAGCAGAGGTAACAGATATCGGAAAGGAGATCTATCAAACCATCAAGGACCTCAGTTGTTTGTTGATTTTTCATAATGGGAGTGACGACACAGTTGATACAAGCAAACTTGGCTTCCCCCTATACGATTGGTCTGATAATAAAGTGCTTTGGACCTTCAGAGGAAGGCTACGGCTCATTCCAAAAATTGCAGATAATGTGGACAGTTCACACCTCAATATTTATAGTCATTATTATTATCATTTTTATTCATTTGAAAGTTTGAATGATTTATTACCAAGAGAAGCTGAAGAAATCACTCAATACTCAGGTGAGCTCCACCTTGATGGCACCAAAGCTGCAGAATGTTGCTTGTATCTATTGTCTCTGAATTATAGGGGTGGCCACATCATGGACTACAACTGGGCAACCCATGCCTGCAACTATTGGGTTTGCGATGGAATAATAACAGTACAAGAAGAAAAAGGAGGAGGTAGCCTACAGGAGGACCAAGCATGGGAGCTTGCAGCTGCTCTGCATCAGGAGATACGTCTAGAGGACTACTCATCCAACAGAGTGCCTGGTTTTGGTCATTATTTGGATACTCCCCCAAATCGATGGGTTTTGGTCACCCAGGAGTCTGACATGAAGGACAAACCAACTCTAGAAACAACGTCCTTGTTCATTGCATTCCAAAGTGTGGTATTGTTACCGGATGACATGTTCCATCAAGCAAACAAAGTCCAAGTACTGAGATTGTGCAACTGTGCCTTCAACTTTTCGTCACCTCCTTTCCATTGCTGCCACAACTTAAGATTTCTTGGCCTGGATAAATGCCAAGATCATCGGACACAAGAAGCTGGAGAGGATAAGAGCAACACTAGTTCAGCACTGGAGTTTTTTCAGAGGCTATGGGTATTAGACATATGCTACATAGATTGGGAGCTGCCTTTCCCTACAGAGAGTACAAGAGAGCAGCAAATGGCAATGAACATTAGGGAGGTACATATAAACAAGGGAAGGATTTGGCGCAGAAATTTTGCATGGCGGCGATTGAAGAACCTTCGAAAGCTTCGAGTAATTGAGCCTACACACCCTTGGGGTAACAAAGGGGAAATAGATGAGTTTGCTGACATGCTGAAGCTGGAGATCGTTGACCTGTCTAAGAATACTATGATACAAGTTTTGCCAAGCCTATGTGGTGCCAGTAGCCTCAAAACACTGATCCTAGATGATTGTGTTGTGCTGGAACAAGTTGGCCCCCAGGGACTTCCTCCTTCGCTTGAATCATTCAGCTTTGCTTCAAGAGAAGGAAACAAAGCTAAAATCTCATCTATCTCCTTGGCTGGTTGCTCGAGCTTGGTGAACTTCACATTACGTGGGCCATTGCAAAACCTTAGGGGATTGGACCTCTCTGGCACAATGATAAAAATGCTTGACCTTCGAGATGTACAAGACTCATGTATTGGACAAATAATTCTGCTACGGTGTGAGAAGCTATGCACCATATTATGGCCAGAGAAAGGATTCCCAAACCTAAGCATGCTACACATTGATTCATTGGTTTGCCATGTAGAAACAGAGCAGCAGCAAGCATATGCAACCGTGATGGATTTAAGATTTGTTCAATCCTTGGTGTTAAGAAGCAATAACAAGTTCTGTTGGAACTGCAATAAGACCCATATAAATATATGCATCTCTTCTACCCCAAAAGATGCAACACCAAAAAAGAAGACAATGAGCTATTACAGCGCTCAAAAAGTAGTTGGCTCACCTCTACACATGCCAATAGTCACCACCATTCAACCTGTTGTTTGCTACAAGGATGTCAACTTGGCCATGATATCTGCTATTGAGCTGGAAGGCAGCAGTGCACCACGGCATGAGCCACTAGACATCCATGTGGAGATCGGAGAGGGAATAAGCTATGCTAATGTTGTCAGTGAACAAGCATTGAGTGCAGTATCATTTATGATGAACAAGGCCAAGTCTTTGCACGTACATGACAATTTTTCAATCACCAGTGTTAACCCTAAACACGTGATTTTGACAGAGGATAAGGAAATTACATGGTATTGTCTAAAGAGGTGCCACATTGAGAGATGTCACAAGTTGAACACTGTCTTCTCTACCGATTATATCAAATACCGCTTTCAAACACTGGAGGCATTTTCAGCAGCTGAGCTCATGATGGCAAATTGTATTTGGAGCAGAGGAAGGACATTCCCTGGTTGGAACAGTAATATGTTTGCAAAACTGAGGAGTATACACTTACACTACTGTCCGAGGCTCACGTTTGTGCTTCCACTATCATGGCCTACTCCATACTCACACTTGCCCAGCTTGGAGACTCTCCACATCGTCTACTGCAGTGAACTCAGACAGATCTTCCCCGTGGAGGCAGTTGCTCTAAGGGAACAACCAAGAGGTGTGCTGAGATTCCCAAAGCTGAAGCACATCCACCTGCATGATGTCCCCAAGCTGCATCAGATATGCGAAATCAGCAGGATGGTTGCTCCTGTGCTCGAGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCGCCATCAACGGTCGCCCAATCGTGGACTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTCTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGTTGTCTGCATGCTTTCTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTCTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCAAGCACCTCTGAGTTGTATATATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAGAGGGTCTGATGGGCCTCTGTGGTGTGCCTACCACTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGGTG]

[+] EMBL AK101349             [ATCACCATTTTTGCTTTGCGACACCGTACGTCCATGTTGCCCCAAACAACTCCGCTTAATTTGCATTGACGATCACTTCTGCCACCAGGGGAAGTGGAGATCCATCTCGATCGATCGATAGATATGGGTTAGATTTGTTTTGTGGAGCTTCTTTTACTTGTCCTTGGAGATAGACAGGAATTCATCATGCGTCGGGAGCGCATTGATGCGACTAGTGTTGAGGCGGCGGTAGAATCACTAATCCCTTACTTGGAGGATACCAGCAGTGCTGCACATAAGTCCATCTACTTTGACGGATGGGATGGACTGGGTGCGTCTGCGGTGCTCAGAGCGATAGCAGAAAATCCAGCGCCATCTCTGAGGAAGAAATTTGACAGGATTATCCATGTTGACTGCTCGAGATGGAAGAAACGAAGGCAACTGCAAAGAGCGATCGCTGATCAACTCAAGCTTCCTCAGCATGTAATGGATTTGTTTGATAGGCAGGATGAGGAGGATGATTTCAGCGGGGTTGAAGAAAGCTCCAGAGCAGAGGTAACAGATATCGGAAAGGAGATCTATCAAACCATCAAGGACCTCAGTTGTTTGTTGATTTTTCATAATGGGAGTGACGACACAGTTGATACAAGCAAACTTGGCTTCCCCCTATACGATTGGTCTGATAATAAAGTGCTTTGGACCTTCAGAGGAAGGCTACGGCTCATTCCAAAAATTGCAGATAATGTGGACAGTTCACACCTCAATATTTATAGTCATTATTATTATCATTTTTATTCATTTGAAAGTTTGAATGATTTATTACCAAGAGAAGCTGAAGAAATCACTCAATACTCAGGTGAGCTCCACCTTGATGGCACCAAAGCTGCAGAATGTTGCTTGTATCTATTGTCTCTGAATTATAGGGGTGGCCACATCATGGACTACAACTGGGCAACCCATGCCTGCAACTATTGGGTTTGCGATGGAATAATAACAGTACAAGAAGAAAAAGGAGGAGGTAGCCTACAGGAGGACCAAGCATGGGAGCTTGCAGCTGCTCTGCATCAGGAGATACGTCTAGAGGACTACTCATCCAACAGAGTGCCTGGTTTTGGTCATTATTTGGATACTCCCCCAAATCGATGGGTTTTGGTCACCCAGGAGTCTGACATGAAGGACAAACCAACTCTAGAAACAACGTCCTTGTTCATTGCATTCCAAAGTGTGGTATTGTTACCGGATGACATGTTCCATCAAGCAAACAAAGTCCAAGTACTGAGATTGTGCAACTGTGCCTTCAACTTTTCGTCACCTCCTTTCCATTGCTGCCACAACTTAAGATTTCTTGGCCTGGATAAATGCCAAGATCATCGGACACAAGAAGCTGGAGAGGATAAGAGCAACACTAGTTCAGCACTGGAGTTTTTTCAGAGGCTATGGGTATTAGACATATGCTACATAGATTGGGAGCTGCCTTTCCCTACAGAGAGTACAAGAGAGCAGCAAATGGCAATGAACATTAGGGAGGTACATATAAACAAGGGAAGGATTTGGCGCAGAAATTTTGCATGGCGGCGATTGAAGAACCTTCGAAAGCTTCGAGTAATTGAGCCTACACACCCTTGGGGTAACAAAGGGGAAATAGATGAGTTTGCTGACATGCTGAAGCTGGAGATCGTTGACCTGTCTAAGAATACTATGATACAAGTTTTGCCAAGCCTATGTGGTGCCAGTAGCCTCAAAACACTGATCCTAGATGATTGTGTTGTGCTGGAACAAGTTGGCCCCCAGGGACTTCCTCCTTCGCTTGAATCATTCAGCTTTGCTTCAAGAGAAGGAAACAAAGCTAAAATCTCATCTATCTCCTTGGCTGGTTGCTCGAGCTTGGTGAACTTCACATTACGTGGGCCATTGCAAAACCTTAGGGGATTGGACCTCTCTGGCACAATGATAAAAATGCTTGACCTTCGAGATGTACAAGACTCATGTATTGGACAAATAATTCTGCTACGGTGTGAGAAGCTATGCACCATATTATGGCCAGAGAAAGGATTCCCAAACCTAAGCATGCTACACATTGATTCATTGGTTTGCCATGTAGAAACAGAGCAGCAGCAAGCATATGCAACCGTGATGGATTTAAGATTTGTTCAATCCTTGGTGTTAAGAAGCAATAACAAGTTCTGTTGGAACTGCAATAAGACCCATATAAATATATGCATCTCTTCTACCCCAAAAGATGCAACACCAAAAAAGAAGACAATGAGCTATTACAGCGCTCAAAAAGTAGTTGGCTCACCTCTACACATGCCAATAGTCACCACCATTCAACCTGTTGTTTGCTACAAGGATGTCAACTTGGCCATGATATCTGCTATTGAGCTGGAAGGCAGCAGTGCACCACGGCATGAGCCACTAGACATCCATGTGGAGATCGGAGAGGGAATAAGCTATGCTAATGTTGTCAGTGAACAAGCATTGAGTGCAGTATCATTTATGATGAACAAGGCCAAGTCTTTGCACGTACATGACAATTTTTCAATCACCAGTGTTAACCCTAAACACGTGATTTTGACAGAGGATAAGGAAATTACATGGTATTGTCTAAAGAGGTGCCACATTGAGAGATGTCACAAGTTGAACACTGTCTTCTCTACCGATTATATCAAATACCGCTTTCAAACACTGGAGGCATTTTCAGCAGCTGAGCTCATGATGGCAAATTGTATTTGGAGCAGAGGAAGGACATTCCCTGGTTGGAACAGTAATATGTTTGCAAAACTGAGGAGTATACACTTACACTACTGTCCGAGGCTCACGTTTGTGCTTCCACTATCATGGCCTACTCCATACTCACACTTGCCCAGCTTGGAGACTCTCCACATCGTCTACTGCAGTGAACTCAGACAGATCTTCCCCGTGGAGGCAGTTGCTCTAAGGGAACAACCAAGAGGTGTGCTGAGATTCCCAAAGCTGAAGCACATCCACCTGCATGATGTCCCCAAGCTGCATCAGATATGCGAAATCAGCAGGATGGTTGCTCCTGTGCTCGAGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCGCCATCAACGGTCGCCCAATCGTGGACTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTCTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGTTGTCTGCATGCTTTCTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTCTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCAAGCACCTCTGAGTTGTATATATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAGAGGGTCTGATGGGCCTCTGTGGTGTGCCTACCACTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTG   ]
[+] EMBL AK107133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGCTTTGCTTCAAGAGAAGGAAACAAAGCTAAAATCTCATCTATCTCCTTGGCTGGTTGCTCGAGCTTGGTGAACTTCACATTACGTGGGCCATTGCAAAACCTTAGGGGATTGGACCTCTCTGGCACAATGATAAAAATGCTTGACCTTCGAGATGTACAAGACTCATGTATTGGACAAATAATTCTGCTACGGTGTGAGAAGCTATGCACCATATTATGGCCAGAGAAAGGATTCCCAAACCTAAGCATGCTACACATTGATTCATTGGTTTGCCATGTAGAAACAGAGCAGCAGCAAGCATATGCAACCGTGATGGATTTAAGATTTGTTCAATCCTTGGTGTTAAGAAGCAATAACAAGTTCTGTTGGAACTGCAATAAGACCCATATAAATATATGCATCTCTTCTACCCCAAAAGATGCAACACCAAAAAAGAAGACAATGAGCTATTACAGCGCTCAAAAAGTAGTTGGCTCACCTCTACACATGCCAATAGTCACCACCATTCAACCTGTTGTTTGCTACAAGGATGTCAACTTGGCCATGATATCTGCTATTGAGCTGGAAGGCAGCAGTGCACCACGGCATGAGCCACTAGACATCCATGTGGAGATCGGAGAGGGAATAAGCTATGCTAATGTTGTCAGTGAACAAGCATTGAGTGCAGTATCATTTATGATGAACAAGGCCAAGTCTTTGCACGTACATGACAATTTTTCAATCACCAGTGTTAACCCTAAACACGTGATTTTGACAGAGGATAAGGAAATTACATGGTATTGTCTAAAGAGGTGCCACATTGAGAGATGTCACAAGTTGAACACTGTCTTCTCTACCGATTATATCAAATACCGCTTTCAAACACTGGAGGCATTTTCAGCAGCTGAGCTCATGATGGCAAATTGTATTTGGAGCAGAGGAAGGACATTCCCTGGTTGGAACAGTAATATGTTTGCAAAACTGAGGAGTATACACTTACACTACTGTCCGAGGCTCACGTTTGTGCTTCCACTATCATGGCCTACTCCATACTCACACTTGCCCAGCTTGGAGACTCTCCACATCGTCTACTGCAGTGAACTCAGACAGATCTTCCCCGTGGAGGCAGTTGCTCTAAGGGAACAACCAAGAGGTGTGCTGAGATTCCCAAAGCTGAAGCACATCCACCTGCATGATGTCCCCAAGCTGCATCAGATATGCGAAATCAGCAGGATGGTTGCTCCTGTGCTCGAGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCGCCATCAACGGTCGCCCAATCGTGGACTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTCTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGTTGTCTGCATGCTTTCTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTCTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCAAGCACCTCTGAGTTGTATATATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAGAGGGTCTGATGGGCCTCTGTGGTGTGCCTACCACTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGGTG]




>consensus_3970#0
ATCACCATTTTTGCTTTGCGACACCGTACGTCCATGTTGCCCCAAACAACTCCGCTTAAT
TTGCATTGACGATCACTTCTGCCACCAGGGGAAGTGGAGATCCATCTCGATCGATCGATA
GATATGGGTTAGATTTGTTTTGTGGAGCTTCTTTTACTTGTCCTTGGAGATAGACAGGAA
TTCATCATGCGTCGGGAGCGCATTGATGCGACTAGTGTTGAGGCGGCGGTAGAATCACTA
ATCCCTTACTTGGAGGATACCAGCAGTGCTGCACATAAGTCCATCTACTTTGACGGATGG
GATGGACTGGGTGCGTCTGCGGTGCTCAGAGCGATAGCAGAAAATCCAGCGCCATCTCTG
AGGAAGAAATTTGACAGGATTATCCATGTTGACTGCTCGAGATGGAAGAAACGAAGGCAA
CTGCAAAGAGCGATCGCTGATCAACTCAAGCTTCCTCAGCATGTAATGGATTTGTTTGAT
AGGCAGGATGAGGAGGATGATTTCAGCGGGGTTGAAGAAAGCTCCAGAGCAGAGGTAACA
GATATCGGAAAGGAGATCTATCAAACCATCAAGGACCTCAGTTGTTTGTTGATTTTTCAT
AATGGGAGTGACGACACAGTTGATACAAGCAAACTTGGCTTCCCCCTATACGATTGGTCT
GATAATAAAGTGCTTTGGACCTTCAGAGGAAGGCTACGGCTCATTCCAAAAATTGCAGAT
AATGTGGACAGTTCACACCTCAATATTTATAGTCATTATTATTATCATTTTTATTCATTT
GAAAGTTTGAATGATTTATTACCAAGAGAAGCTGAAGAAATCACTCAATACTCAGGTGAG
CTCCACCTTGATGGCACCAAAGCTGCAGAATGTTGCTTGTATCTATTGTCTCTGAATTAT
AGGGGTGGCCACATCATGGACTACAACTGGGCAACCCATGCCTGCAACTATTGGGTTTGC
GATGGAATAATAACAGTACAAGAAGAAAAAGGAGGAGGTAGCCTACAGGAGGACCAAGCA
TGGGAGCTTGCAGCTGCTCTGCATCAGGAGATACGTCTAGAGGACTACTCATCCAACAGA
GTGCCTGGTTTTGGTCATTATTTGGATACTCCCCCAAATCGATGGGTTTTGGTCACCCAG
GAGTCTGACATGAAGGACAAACCAACTCTAGAAACAACGTCCTTGTTCATTGCATTCCAA
AGTGTGGTATTGTTACCGGATGACATGTTCCATCAAGCAAACAAAGTCCAAGTACTGAGA
TTGTGCAACTGTGCCTTCAACTTTTCGTCACCTCCTTTCCATTGCTGCCACAACTTAAGA
TTTCTTGGCCTGGATAAATGCCAAGATCATCGGACACAAGAAGCTGGAGAGGATAAGAGC
AACACTAGTTCAGCACTGGAGTTTTTTCAGAGGCTATGGGTATTAGACATATGCTACATA
GATTGGGAGCTGCCTTTCCCTACAGAGAGTACAAGAGAGCAGCAAATGGCAATGAACATT
AGGGAGGTACATATAAACAAGGGAAGGATTTGGCGCAGAAATTTTGCATGGCGGCGATTG
AAGAACCTTCGAAAGCTTCGAGTAATTGAGCCTACACACCCTTGGGGTAACAAAGGGGAA
ATAGATGAGTTTGCTGACATGCTGAAGCTGGAGATCGTTGACCTGTCTAAGAATACTATG
ATACAAGTTTTGCCAAGCCTATGTGGTGCCAGTAGCCTCAAAACACTGATCCTAGATGAT
TGTGTTGTGCTGGAACAAGTTGGCCCCCAGGGACTTCCTCCTTCGCTTGAATCATTCAGC
TTTGCTTCAAGAGAAGGAAACAAAGCTAAAATCTCATCTATCTCCTTGGCTGGTTGCTCG
AGCTTGGTGAACTTCACATTACGTGGGCCATTGCAAAACCTTAGGGGATTGGACCTCTCT
GGCACAATGATAAAAATGCTTGACCTTCGAGATGTACAAGACTCATGTATTGGACAAATA
ATTCTGCTACGGTGTGAGAAGCTATGCACCATATTATGGCCAGAGAAAGGATTCCCAAAC
CTAAGCATGCTACACATTGATTCATTGGTTTGCCATGTAGAAACAGAGCAGCAGCAAGCA
TATGCAACCGTGATGGATTTAAGATTTGTTCAATCCTTGGTGTTAAGAAGCAATAACAAG
TTCTGTTGGAACTGCAATAAGACCCATATAAATATATGCATCTCTTCTACCCCAAAAGAT
GCAACACCAAAAAAGAAGACAATGAGCTATTACAGCGCTCAAAAAGTAGTTGGCTCACCT
CTACACATGCCAATAGTCACCACCATTCAACCTGTTGTTTGCTACAAGGATGTCAACTTG
GCCATGATATCTGCTATTGAGCTGGAAGGCAGCAGTGCACCACGGCATGAGCCACTAGAC
ATCCATGTGGAGATCGGAGAGGGAATAAGCTATGCTAATGTTGTCAGTGAACAAGCATTG
AGTGCAGTATCATTTATGATGAACAAGGCCAAGTCTTTGCACGTACATGACAATTTTTCA
ATCACCAGTGTTAACCCTAAACACGTGATTTTGACAGAGGATAAGGAAATTACATGGTAT
TGTCTAAAGAGGTGCCACATTGAGAGATGTCACAAGTTGAACACTGTCTTCTCTACCGAT
TATATCAAATACCGCTTTCAAACACTGGAGGCATTTTCAGCAGCTGAGCTCATGATGGCA
AATTGTATTTGGAGCAGAGGAAGGACATTCCCTGGTTGGAACAGTAATATGTTTGCAAAA
CTGAGGAGTATACACTTACACTACTGTCCGAGGCTCACGTTTGTGCTTCCACTATCATGG
CCTACTCCATACTCACACTTGCCCAGCTTGGAGACTCTCCACATCGTCTACTGCAGTGAA
CTCAGACAGATCTTCCCCGTGGAGGCAGTTGCTCTAAGGGAACAACCAAGAGGTGTGCTG
AGATTCCCAAAGCTGAAGCACATCCACCTGCATGATGTCCCCAAGCTGCATCAGATATGC
GAAATCAGCAGGATGGTTGCTCCTGTGCTCGAGACAATCAGGGTGAGGGGATGCTGGGCT
CTCAAGCGCATCCCCGCCATCAACGGTCGCCCAATCGTGGACTGCGAGAAGGACTGGTGG
GAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGC
CACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTCTCCGGTGAGGCGACATG
CAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGTTGT
CTGCATGCTTTCTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTCTGAAGAA
TAAATTGGTGCATCATGTGCTTGCAGCAAGCACCTCTGAGTTGTATATATTGTTGTGTGC
TTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATC
TGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAGAGGGTCTGATGGGCCTCT
GTGGTGTGCCTACCACTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACG
AATGGACATAAATTAAATATTGATGCTGCATCGTGGTG

consensusID : consensus_3970#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence 
                              [AGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCCGCCATCGACGGCAGCCTCCGTGGTCAGGACAGTCGCCCAATCGTGGATTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTTTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGGTGTCTGCCTGCTTTTTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTTTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCATGCACCTTTGAGTTGTATACATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAAAGGGTTTGATGGGCCTTTGTGGTGTGCCTACCCCTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGGTGATGCTGCACCAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762761             [AGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCCGCCATCGACGGCAGCCTCCGTGGTCAGGACAGTCGCCCAATCGTGGATTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTCTCTTTTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGGTGTCTGCCTGCTTTTTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTTTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCATGCACCTTTGAGTTGTATACATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGAAATAAAAGGGTTTGATGGGCCTTTGTGGTGTGCCTACCCCTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGGTGATGCTGCACCAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_3970#1
AGACAATCAGGGTGAGGGGATGCTGGGCTCTCAAGCGCATCCCCCGCCATCGACGGCAGC
CTCCGTGGTCAGGACAGTCGCCCAATCGTGGATTGCGAGAAGGACTGGTGGGAGAAGCTG
GAATGGGAGGGGATGAATGTTGGCCATGACCCCTCCCTCTTTGAGCCTCGCCACTCGATG
TACTACAAGAAGGCTCTACCCAGATGCTCTCTTTTCCGGTGAGGCGACATGCAGACGCTG
TATCAACTGCTGCTCACTTGTTAAGATTTACTGATGGATCAACCAAGGTGTCTGCCTGCT
TTTTTCCGTCTCGCTGCAGTGGTTTCGAGTGTTTGCTTGTTTTTTGAAGAATAAATTGGT
GCATCATGTGCTTGCAGCATGCACCTTTGAGTTGTATACATTGTTGTGTGCTTGCATACT
AAGTTAATTAATTCGCGTGTGTGTCTCTCAGGGGAGTGACGCAGAACCATCTGTGTGTGT
GTGGATTTGTTGATGATGTATGTGCTTGAAATAAAAGGGTTTGATGGGCCTTTGTGGTGT
GCCTACCCCTAGTTCCCAGAAGTTCATGGTGTGACAGTGTGTAATTGCAAACGAATGGAC
ATAAATTAAATATTGATGCTGCATCGTGGTGATGCTGCACCAAAAAAAAAAAAAAAAAAA
AAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3970#0      ATCACCATTTTTGCTTTGCGACACCGTACGTCCATGTTGCCCCAAACAACTCCGCTTAAT 60
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTGCATTGACGATCACTTCTGCCACCAGGGGAAGTGGAGATCCATCTCGATCGATCGATA 120
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATATGGGTTAGATTTGTTTTGTGGAGCTTCTTTTACTTGTCCTTGGAGATAGACAGGAA 180
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTCATCATGCGTCGGGAGCGCATTGATGCGACTAGTGTTGAGGCGGCGGTAGAATCACTA 240
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATCCCTTACTTGGAGGATACCAGCAGTGCTGCACATAAGTCCATCTACTTTGACGGATGG 300
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATGGACTGGGTGCGTCTGCGGTGCTCAGAGCGATAGCAGAAAATCCAGCGCCATCTCTG 360
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGGAAGAAATTTGACAGGATTATCCATGTTGACTGCTCGAGATGGAAGAAACGAAGGCAA 420
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTGCAAAGAGCGATCGCTGATCAACTCAAGCTTCCTCAGCATGTAATGGATTTGTTTGAT 480
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGGCAGGATGAGGAGGATGATTTCAGCGGGGTTGAAGAAAGCTCCAGAGCAGAGGTAACA 540
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATATCGGAAAGGAGATCTATCAAACCATCAAGGACCTCAGTTGTTTGTTGATTTTTCAT 600
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AATGGGAGTGACGACACAGTTGATACAAGCAAACTTGGCTTCCCCCTATACGATTGGTCT 660
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATAATAAAGTGCTTTGGACCTTCAGAGGAAGGCTACGGCTCATTCCAAAAATTGCAGAT 720
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AATGTGGACAGTTCACACCTCAATATTTATAGTCATTATTATTATCATTTTTATTCATTT 780
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GAAAGTTTGAATGATTTATTACCAAGAGAAGCTGAAGAAATCACTCAATACTCAGGTGAG 840
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTCCACCTTGATGGCACCAAAGCTGCAGAATGTTGCTTGTATCTATTGTCTCTGAATTAT 900
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGGGGTGGCCACATCATGGACTACAACTGGGCAACCCATGCCTGCAACTATTGGGTTTGC 960
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATGGAATAATAACAGTACAAGAAGAAAAAGGAGGAGGTAGCCTACAGGAGGACCAAGCA 1020
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TGGGAGCTTGCAGCTGCTCTGCATCAGGAGATACGTCTAGAGGACTACTCATCCAACAGA 1080
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GTGCCTGGTTTTGGTCATTATTTGGATACTCCCCCAAATCGATGGGTTTTGGTCACCCAG 1140
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GAGTCTGACATGAAGGACAAACCAACTCTAGAAACAACGTCCTTGTTCATTGCATTCCAA 1200
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGTGTGGTATTGTTACCGGATGACATGTTCCATCAAGCAAACAAAGTCCAAGTACTGAGA 1260
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTGTGCAACTGTGCCTTCAACTTTTCGTCACCTCCTTTCCATTGCTGCCACAACTTAAGA 1320
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTTCTTGGCCTGGATAAATGCCAAGATCATCGGACACAAGAAGCTGGAGAGGATAAGAGC 1380
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AACACTAGTTCAGCACTGGAGTTTTTTCAGAGGCTATGGGTATTAGACATATGCTACATA 1440
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GATTGGGAGCTGCCTTTCCCTACAGAGAGTACAAGAGAGCAGCAAATGGCAATGAACATT 1500
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGGGAGGTACATATAAACAAGGGAAGGATTTGGCGCAGAAATTTTGCATGGCGGCGATTG 1560
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AAGAACCTTCGAAAGCTTCGAGTAATTGAGCCTACACACCCTTGGGGTAACAAAGGGGAA 1620
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATAGATGAGTTTGCTGACATGCTGAAGCTGGAGATCGTTGACCTGTCTAAGAATACTATG 1680
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATACAAGTTTTGCCAAGCCTATGTGGTGCCAGTAGCCTCAAAACACTGATCCTAGATGAT 1740
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TGTGTTGTGCTGGAACAAGTTGGCCCCCAGGGACTTCCTCCTTCGCTTGAATCATTCAGC 1800
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTTGCTTCAAGAGAAGGAAACAAAGCTAAAATCTCATCTATCTCCTTGGCTGGTTGCTCG 1860
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGCTTGGTGAACTTCACATTACGTGGGCCATTGCAAAACCTTAGGGGATTGGACCTCTCT 1920
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GGCACAATGATAAAAATGCTTGACCTTCGAGATGTACAAGACTCATGTATTGGACAAATA 1980
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATTCTGCTACGGTGTGAGAAGCTATGCACCATATTATGGCCAGAGAAAGGATTCCCAAAC 2040
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTAAGCATGCTACACATTGATTCATTGGTTTGCCATGTAGAAACAGAGCAGCAGCAAGCA 2100
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TATGCAACCGTGATGGATTTAAGATTTGTTCAATCCTTGGTGTTAAGAAGCAATAACAAG 2160
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TTCTGTTGGAACTGCAATAAGACCCATATAAATATATGCATCTCTTCTACCCCAAAAGAT 2220
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GCAACACCAAAAAAGAAGACAATGAGCTATTACAGCGCTCAAAAAGTAGTTGGCTCACCT 2280
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTACACATGCCAATAGTCACCACCATTCAACCTGTTGTTTGCTACAAGGATGTCAACTTG 2340
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GCCATGATATCTGCTATTGAGCTGGAAGGCAGCAGTGCACCACGGCATGAGCCACTAGAC 2400
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATCCATGTGGAGATCGGAGAGGGAATAAGCTATGCTAATGTTGTCAGTGAACAAGCATTG 2460
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGTGCAGTATCATTTATGATGAACAAGGCCAAGTCTTTGCACGTACATGACAATTTTTCA 2520
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      ATCACCAGTGTTAACCCTAAACACGTGATTTTGACAGAGGATAAGGAAATTACATGGTAT 2580
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TGTCTAAAGAGGTGCCACATTGAGAGATGTCACAAGTTGAACACTGTCTTCTCTACCGAT 2640
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      TATATCAAATACCGCTTTCAAACACTGGAGGCATTTTCAGCAGCTGAGCTCATGATGGCA 2700
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AATTGTATTTGGAGCAGAGGAAGGACATTCCCTGGTTGGAACAGTAATATGTTTGCAAAA 2760
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTGAGGAGTATACACTTACACTACTGTCCGAGGCTCACGTTTGTGCTTCCACTATCATGG 2820
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CCTACTCCATACTCACACTTGCCCAGCTTGGAGACTCTCCACATCGTCTACTGCAGTGAA 2880
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      CTCAGACAGATCTTCCCCGTGGAGGCAGTTGCTCTAAGGGAACAACCAAGAGGTGTGCTG 2940
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      AGATTCCCAAAGCTGAAGCACATCCACCTGCATGATGTCCCCAAGCTGCATCAGATATGC 3000
consensus_3970#1      ------------------------------------------------------------
                                                                                  

consensus_3970#0      GAAATCAGCAGGATGGTTGCTCCTGTGCTCGAGACAATCAGGGTGAGGGGATGCTGGGCT 3060
consensus_3970#1      -------------------------------AGACAATCAGGGTGAGGGGATGCTGGGCT 29
                                                     *****************************

consensus_3970#0      CTCAAGCGCATCCCC-GCCATCAACGG---------------------TCGCCCAATCGT 3098
consensus_3970#1      CTCAAGCGCATCCCCCGCCATCGACGGCAGCCTCCGTGGTCAGGACAGTCGCCCAATCGT 89
                      *************** ****** ****                     ************

consensus_3970#0      GGACTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGA 3158
consensus_3970#1      GGATTGCGAGAAGGACTGGTGGGAGAAGCTGGAATGGGAGGGGATGAATGTTGGCCATGA 149
                      *** ********************************************************

consensus_3970#0      CCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTC 3218
consensus_3970#1      CCCCTCCCTCTTTGAGCCTCGCCACTCGATGTACTACAAGAAGGCTCTACCCAGATGCTC 209
                      ************************************************************

consensus_3970#0      TCTTCTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTT 3278
consensus_3970#1      TCTTTTCCGGTGAGGCGACATGCAGACGCTGTATCAACTGCTGCTCACTTGTTAAGATTT 269
                      **** *******************************************************

consensus_3970#0      ACTGATGGATCAACCAAGTTGTCTGCATGCTTTCTTCCGTCTCGCTGCAGTGGTTTCGAG 3338
consensus_3970#1      ACTGATGGATCAACCAAGGTGTCTGCCTGCTTTTTTCCGTCTCGCTGCAGTGGTTTCGAG 329
                      ****************** ******* ****** **************************

consensus_3970#0      TGTTTGCTTGTTTTCTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCAAGCACCTCTG 3398
consensus_3970#1      TGTTTGCTTGTTTTTTGAAGAATAAATTGGTGCATCATGTGCTTGCAGCATGCACCTTTG 389
                      ************** *********************************** ****** **

consensus_3970#0      AGTTGTATATATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTC 3458
consensus_3970#1      AGTTGTATACATTGTTGTGTGCTTGCATACTAAGTTAATTAATTCGCGTGTGTGTCTCTC 449
                      ********* **************************************************

consensus_3970#0      AGGGGAGTGACGCAGAACCATCTGTGTGTGTG--GATTTGTTGATGATGTATGTGCTTGA 3516
consensus_3970#1      AGGGGAGTGACGCAGAACCATCTGTGTGTGTGTGGATTTGTTGATGATGTATGTGCTTGA 509
                      ********************************  **************************

consensus_3970#0      AATAAGAGGGTCTGATGGGCCTCTGTGGTGTGCCTACCACTAGTTCCCAGAAGTTCATGG 3576
consensus_3970#1      AATAAAAGGGTTTGATGGGCCTTTGTGGTGTGCCTACCCCTAGTTCCCAGAAGTTCATGG 569
                      ***** ***** ********** *************** *********************

consensus_3970#0      TGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGG 3636
consensus_3970#1      TGTGACAGTGTGTAATTGCAAACGAATGGACATAAATTAAATATTGATGCTGCATCGTGG 629
                      ************************************************************

consensus_3970#0      TG---------------------------------- 3638
consensus_3970#1      TGATGCTGCACCAAAAAAAAAAAAAAAAAAAAAAAA 665
                      **


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)