These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3986#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3132 fasta sequence [TCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTAGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCAAGCTCAAGCTGTTGCACAGAATGCAGAAAACCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCTATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAAGTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTAATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAAAGTGCATTTATCTGGGTTCATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACTTTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAGGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCGAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATGAATTGCACTCAAAAAG] [+] EMBL AK120156 [TCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTAGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCAAGCTCAAGCTGTTGCACAGAATGCAGAAAACCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCTATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAAGTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTAATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAAAGTGCATTTATCTGGGTTCATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACTTTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAGGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCGAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATGAATTGCACTCAAAAAG] [+] EMBL CA766062 [ TGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCAT GGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGGTGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGNTGCTGCTGGCCTAGAACATCAATTTTTCAT ] [+] EMBL CB678743 [ GCATTCAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||