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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3988#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3370 fasta sequence
[TCCGCCATGAGACCACCACCACCCCACCTCCTCCTCCTCCTCCCCCACCGCCGCCGCCACGCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCCTTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGTGGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGCCTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTCCTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATCCGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCGGAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATCACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCGCGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCAGGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCTCTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGATGCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACGTACAATGTGCTTATGGATGCACTGTGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTGAAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATCAATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAACAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGGAAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAGCCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAGCGGGCTGAGGGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTGTTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGCATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGTATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACATTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGTGAAGGTAAGTACATGAAAGAAGCTACAAAGGTTATACAGACCATGTTAAATAAGGGAATTGAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATGGAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTCACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCATCTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATAATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTGATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGTAGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATACAACCAACTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTTGAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATTGGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCATACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTTATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATGGTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCTGAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTAACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAGAAAGAAGCTGCTTCCAGTGTTGAATGATGTGAGGTCAAGGAACCTTAGGGCACACCTTCTTTGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGATTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTCATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCAAGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTGCCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGACCTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAACTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAATACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGAAACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAGTTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGACCCCAGGTCATTTGCGTCGTATCATCCTCTCAGAGATTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATTTTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGNTGTTGAGTGTGATCAATTGCAAGATGGTGGGCATTGTTACCATGGGGTTTTCATGCCATTGGGTTGGATGGAGATGTTGATGCCCCCAGCAGGCACAAGGAAGCCTTGTCTTTCTGATGCAACTGGAACTACTCCACTAATTCGCTGTGGACATTGACATGGATTAAGATATGGCA]
[+] EMBL AK120164 [TCCGCCATGAGACCACCACCACCCCACCTCCTCCTCCTCCTCCCCCACCGCCGCCGCCACGCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCCTTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGTGGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGCCTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTCCTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATCCGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCGGAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATCACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCGCGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCAGGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCTCTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGATGCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACGTACAATGTGCTTATGGATGCACTGTGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTGAAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATCAATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAACAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGGAAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAGCCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAGCGGGCTGAGGGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTGTTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGCATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGTATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACATTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGTGAAGGTAAGTACATGAAAGAAGCTACAAAGGTTATACAGACCATGTTAAATAAGGGAATTGAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATGGAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTCACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCATCTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATAATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTGATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGTAGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATACAACCAACTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTTGAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATTGGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCATACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTTATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATGGTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCTGAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTAACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAGAAAGAAGCTGCTTCCAGTGTTGAATGATGTGAGGTCAAGGAACCTTAGGGCACACCTTCTTTGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGATTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTCATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCAAGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTGCCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGACCTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAACTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAATACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGAAACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAGTTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGACCCCAGGTC ]
[+] EMBL CA755173 [ ATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAACTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAATACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGAAACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAGTTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGACCCCAGGTTATTTGCGTCGTATCATCCTCTCAGAGATTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATTTTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGNTGTTGAGTGTGATCAATTGCAAGATGGTGGGCATTGTTACCATGGGGTTTTCATGCCATTGGGTTGGATGGAGATGTTGATGCCCCCAGCAGGCACAAGGAAGCCTTGTCTTTCTGATGCAACTGGAACTACTCCACTAATTCGCTGTGGACATTGACATGGATTAAGATATGGCA]
consensusID : consensus_3988#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3191 fasta sequence
[TCCTCGTCGACGTCGTCTCCTCTGCCGCGGGGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCCTTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGTGGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGCCTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTCCTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATCCGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCGGAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATCACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCGCGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCAGGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCTCTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGATGCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACGTACAATGTGCTTATGGATGCACTGAGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTGAAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATCAATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAACAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGGAAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAGCCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAGCGGGCTGAGAGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTGTTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGCATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGTATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACATTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGTGAAGGTAAGTACATGAAAGAAGCTACAAAAGTTATACAGACCATGTTAAATAAGGGAATTGAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATGGAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTCACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCATCTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATAATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTGATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGTAGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATACAACCAATTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTTGAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATTGGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCATACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTTATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATGGTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCTGAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTAACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAGAAAGAAGCTGCTTCCAGTGTTGAATGATGTGTGGTCAAGGAACCTTAGGGCACACCTTCTTCGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGATTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTCATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCAAGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTGCCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGACCTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAACTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAATACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGAAACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAGTTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGACCCCAGTTCTCTGAATACTGAATTTTGTCAGGTTATTTGCGTCGTATCATCCTCTCAGAGATTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATTGCAATTCTCCTAGATTTTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGTGTTGAGTGTGAT]
[-] EMBL AK101041 [TCCTCGTCGACGTCGTCTCCTCTGCCGCGGGGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCCTTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGTGGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGCCTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTCCTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATCCGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCGGAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATCACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCGCGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCAGGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCTCTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGATGCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACGTACAATGTGCTTATGGATGCACTGAGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTGAAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATCAATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAACAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGGAAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAGCCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAGCGGGCTGAGAGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTGTTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGCATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGTATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACATTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGTGAAGGTAAGTACATGAAAGAAGCTACAAAAGTTATACAGACCATGTTAAATAAGGGAATTGAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATGGAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTCACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCATCTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATAATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTGATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGTAGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATACAACCAATTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTTGAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATTGGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCATACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTTATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATGGTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCTGAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTAACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAGAAAGAAGCTGCTTCCAGTGTTGAATGATGTGTGGTCAAGGAACCTTAGGGCACACCTTCTTCGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGATTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTCATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCAAGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTGCCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGACCTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAACTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAATACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGAAACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAGTTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGACCCCAGTTCTCTGAATACTGAATTTTGTCAGGTTATTTGCGTCGTATCATCCTCTCAGAGATTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATTGCAATTCTCCTAGATTTTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGTGTTGAGTGTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3988#0 TCCGCCATGAGACCACCACCACCCCACCTCCTCCTCCTCCTCCCCCACCGCCGCCGCCAC 60
consensus_3988#1 -------------------------------------------------------TCCTC 5
** *
consensus_3988#0 GCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCC 120
consensus_3988#1 GTCGACGTCGTCTCCTCTGCCGC-GGGGCCGCCGGAGAGCTCGTCGGCGCCCTCTCCGCC 64
* * * * **** * ***** * *********************************
consensus_3988#0 TTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGT 180
consensus_3988#1 TTGCCCTCCCCCGACTCGGCGCGACACCTCGACGCCCTCCTCCGTCGCATCGGCGGCGGT 124
************************************************************
consensus_3988#0 GGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGC 240
consensus_3988#1 GGCCTCGCCGCCGTCCTCTCGTCCCTGCCCTCCCCTCTCCCCGCGGCCTCCGCCCTCCGC 184
************************************************************
consensus_3988#0 CTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTC 300
consensus_3988#1 CTCCTCCTCCACCTCCTCTCCAGGACCTCCTCCACCTCCTCCCGCTCCGAGGATGACCTC 244
************************************************************
consensus_3988#0 CTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATC 360
consensus_3988#1 CTCACCCCGCGCGTCTCGGCGCTCCTCCTGCCCTCCCTCATCGCCGATCGCACCGCCATC 304
************************************************************
consensus_3988#0 CGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCG 420
consensus_3988#1 CGGACGGCGCGCCGCCTCCTCTCACGACTCCTCCACGTCCACCCGCTCCGCACCGCCGCG 364
************************************************************
consensus_3988#0 GAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATC 480
consensus_3988#1 GAGGCGGTCGCCGACGCCGCCTCCACCCCCTCCTCGGACTTCCTCATCCACACCTTCATC 424
************************************************************
consensus_3988#0 ACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCG 540
consensus_3988#1 ACCTCCCCGGCCCAAGGCTCCCTCTGCAGGGCCGCCGACGCGTTCCGCGTTCTCTCCTCG 484
************************************************************
consensus_3988#0 CGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCA 600
consensus_3988#1 CGCGGCGCGCCGCCCTCCATCAAGACCTGCAATGCGTTCCTCGAAGCCCTTGTTCGTGCA 544
************************************************************
consensus_3988#0 GGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCT 660
consensus_3988#1 GGTCAGCTCGATGCCGCCCGCGAGGTGTTCGACGAAATGCGTGAAAGCAGGAACGTCGCT 604
************************************************************
consensus_3988#0 CTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGAT 720
consensus_3988#1 CTGAATGAGTACTCGTATACCGCCATGATCAAGGCGCTCTGCAAGGCTGGAAAGGTGGAT 664
************************************************************
consensus_3988#0 GCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACG 780
consensus_3988#1 GCTGGTTTTGAGATGCTTGCAGAGTTATGGCGGGCTGGGCTTCAGCCAACGGTTGTGACG 724
************************************************************
consensus_3988#0 TACAATGTGCTTATGGATGCACTGTGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTG 840
consensus_3988#1 TACAATGTGCTTATGGATGCACTGAGTAAGAGTGGGAGGGTGGAGGAGGCCTTTCGATTG 784
************************ ***********************************
consensus_3988#0 AAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATC 900
consensus_3988#1 AAAGGGAGGATGGAACAGGGAGGGATGACACCAAGCGTGGTCACATTCGGTATATTGATC 844
************************************************************
consensus_3988#0 AATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAA 960
consensus_3988#1 AATGGTCTTGCAAGGGGCGAGCGGTTTGGGGAGGTTGGCATTGTATTGCAGGAGATGGAA 904
************************************************************
consensus_3988#0 CAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGG 1020
consensus_3988#1 CAGTTAGGGGTTTCCCCCAATGAGGTTATTTACAATGAGCTTATTGGTTGGCATTGTAGG 964
************************************************************
consensus_3988#0 AAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAG 1080
consensus_3988#1 AAGGGCCATTGCTCACAGGCACTCAGGTTGTTTGATGAAATGGTTTTAAAGAAGATGAAG 1024
************************************************************
consensus_3988#0 CCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAG 1140
consensus_3988#1 CCAACAGCCGTGACTTATAACTTGATTGCAAAGGCACTGTGCAAGGAAGGGGAGATGGAG 1084
************************************************************
consensus_3988#0 CGGGCTGAGGGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTG 1200
consensus_3988#1 CGGGCTGAGAGGATATTGGAGGATATGTTGTCAATTGGAATGACAGTTCATTGTGGTTTG 1144
********* **************************************************
consensus_3988#0 TTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGC 1260
consensus_3988#1 TTCAATACAGTGGTTGCATGGCTTCTTCAAAGAACCAGAAGATTGGAGTCAGTGGTAAGC 1204
************************************************************
consensus_3988#0 ATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGT 1320
consensus_3988#1 ATTACAAATGAAATGGTTACACGAGGTATGCGCCCAAATGATCCTCTGATGACAGCTTGT 1264
************************************************************
consensus_3988#0 ATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACA 1380
consensus_3988#1 ATGAGGGAGCTTTGCAAGGGAGGGAAACATCAAGAAGCAGTTGGGATTTGGTTCAAGACA 1324
************************************************************
consensus_3988#0 TTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGT 1440
consensus_3988#1 TTGAACAAAGGTTTAGGTGTTAATCTTGCAACTTCCAATGCGCTAATTCATGGTCTTTGT 1384
************************************************************
consensus_3988#0 GAAGGTAAGTACATGAAAGAAGCTACAAAGGTTATACAGACCATGTTAAATAAGGGAATT 1500
consensus_3988#1 GAAGGTAAGTACATGAAAGAAGCTACAAAAGTTATACAGACCATGTTAAATAAGGGAATT 1444
***************************** ******************************
consensus_3988#0 GAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATG 1560
consensus_3988#1 GAATTGGATAGCATCACATATAACATTATGATTCGAGGTTGCTGCAAAGACAGTAAAATG 1504
************************************************************
consensus_3988#0 GAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTC 1620
consensus_3988#1 GAGGAAGCTATTAAACTCCATGGCGACATGACCAGAAGAGGGTTTAAGCCTGATCTTTTC 1564
************************************************************
consensus_3988#0 ACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCAT 1680
consensus_3988#1 ACATTTAATACTTTATTGCATGCTTATTGCAATTTGGGTAAAATGGAGGAAACCTTTCAT 1624
************************************************************
consensus_3988#0 CTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATA 1740
consensus_3988#1 CTGTTGGATCAGATGAAAACTGAGGGCCTTCAGCCTGATATAGTGTCATATGGCACTATA 1684
************************************************************
consensus_3988#0 ATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTG 1800
consensus_3988#1 ATAGATGGTCATTGTAAAGCAAAGGATATTCGTAAAGCAAAAGAATATTTGACTGAATTG 1744
************************************************************
consensus_3988#0 ATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGT 1860
consensus_3988#1 ATGGATCGTGGACTTAAACCTAATGTGTTCATTTATAATGCACTTATTGGTGGTTATGGT 1804
************************************************************
consensus_3988#0 AGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATA 1920
consensus_3988#1 AGGAATGGTGACATCTCTGGTGCAATTGATGCTGTTGAGACTATGAAGTCTAATGGCATA 1864
************************************************************
consensus_3988#0 CAACCAACTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTT 1980
consensus_3988#1 CAACCAATTAATGTGACTTATGGTAGTCTTATGTACTGGATGTGTCATGCTGGTCTAGTT 1924
******* ****************************************************
consensus_3988#0 GAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATT 2040
consensus_3988#1 GAAGAGGCCAAGACCATTTTTTCACAAGCCAGGGAAAACAATGTTGACCTGGGAGTAATT 1984
************************************************************
consensus_3988#0 GGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCA 2100
consensus_3988#1 GGTTACACAATTATGATTCAAGGTTACTGCAAACTAGGAAAAATGGTTGAAGCTGTTGCA 2044
************************************************************
consensus_3988#0 TACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTT 2160
consensus_3988#1 TACTTTGAGGAGATGCGTTCCAGGGGTATATCTCCAAATAAGCTTACTTACACTACTCTT 2104
************************************************************
consensus_3988#0 ATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATG 2220
consensus_3988#1 ATGTATGCTTACTCTAAATCTGGTAACAGTGAAGAAGCTTCCAAGCTTTTCGATGAGATG 2164
************************************************************
consensus_3988#0 GTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCT 2280
consensus_3988#1 GTGGGCTCAGGTGTTATTCCTGACAATATTACTTATGGTACACTAATTGCAAGGTGTTCT 2224
************************************************************
consensus_3988#0 GAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTA 2340
consensus_3988#1 GAGGTAAATTCATTGGATAAGGATATAGGACATACTGCTGAATTGTCCTCAGGCGCTTTA 2284
************************************************************
consensus_3988#0 ACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAG 2400
consensus_3988#1 ACAAAAGATGATCGTATGTATAACATATTATCTAATGGAATTAATGCTCCTTGGTGCCAG 2344
************************************************************
consensus_3988#0 AAAGAAGCTGCTTCCAGTGTTGAATGATGTGAGGTCAAGGAACCTTAGGGCACACCTTCT 2460
consensus_3988#1 AAAGAAGCTGCTTCCAGTGTTGAATGATGTGTGGTCAAGGAACCTTAGGGCACACCTTCT 2404
******************************* ****************************
consensus_3988#0 TTGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGA 2520
consensus_3988#1 TCGTTCTGACAAGAACCGTCCAAGAATGAACAGGGAGTAGGGAGAACATGTGGCCACTGA 2464
* **********************************************************
consensus_3988#0 TTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTC 2580
consensus_3988#1 TTCTGCCTTTGATCTTATGAATTTTACATCTCCTAACAGTTCCCTCCAATTCATTTGGTC 2524
************************************************************
consensus_3988#0 ATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCA 2640
consensus_3988#1 ATGGTCAATCTTTGGGAGCTATCCAGCAACAGCAGAGGTTGTTCTGAACATTTCTGCTCA 2584
************************************************************
consensus_3988#0 AGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTG 2700
consensus_3988#1 AGTTTACATGATCATCCACCTACTGTCTTGGGTGGGGTATCCAACAGCAGCAACAGATTG 2644
************************************************************
consensus_3988#0 CCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGAC 2760
consensus_3988#1 CCCTGAATGTTTATAATTGGGGGAAAAACAACCCAATATGGACAAGAACTGCACTGTGAC 2704
************************************************************
consensus_3988#0 CTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAA 2820
consensus_3988#1 CTATCAAAGCTCTTATCTGCGGACTGGATAATGGATACACAGGTTCACTTTGGTCATCAA 2764
************************************************************
consensus_3988#0 CTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAAT 2880
consensus_3988#1 CTAAAGCACCTTGAGAGCCAATGTATGGATGATAATGCAAGATGGTTGTTGAACCATAAT 2824
************************************************************
consensus_3988#0 ACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGA 2940
consensus_3988#1 ACCAGCTGCAAATTTCAAAAGGATTGCCAGCATACTATGGCGGCGCAATGTGTGGTGGGA 2884
************************************************************
consensus_3988#0 AACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAG 3000
consensus_3988#1 AACCTCACAATGCTGGTTATTCTGCATCCTGCCACCTGCTGGCATAACAGCCATCAGGAG 2944
************************************************************
consensus_3988#0 TTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGAC 3060
consensus_3988#1 TTTAGTACCTGGTGACTAGACAGCCTGTCAACATGGCCACATGGGCGTTTGCACCATGAC 3004
************************************************************
consensus_3988#0 CCCAG-------------------------GTCATTTGCGTCGTATCATCCTCTCAGAGA 3095
consensus_3988#1 CCCAGTTCTCTGAATACTGAATTTTGTCAGGTTATTTGCGTCGTATCATCCTCTCAGAGA 3064
***** ** ***************************
consensus_3988#0 TTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATT----------- 3144
consensus_3988#1 TTTGCCATTTTACAAGCTCTCCACAAAGAACACCATATTCTCCTCAATTGCAATTCTCCT 3124
*************************************************
consensus_3988#0 -----TTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGNTGTTG 3199
consensus_3988#1 AGATTTTCTGAAGATTGAAATTTTGGGGGGAAACATCAACGTTGATTGGGATGGT-GTTG 3183
************************************************* ****
consensus_3988#0 AGTGTGATCAATTGCAAGATGGTGGGCATTGTTACCATGGGGTTTTCATGCCATTGGGTT 3259
consensus_3988#1 AGTGTGAT---------------------------------------------------- 3191
********
consensus_3988#0 GGATGGAGATGTTGATGCCCCCAGCAGGCACAAGGAAGCCTTGTCTTTCTGATGCAACTG 3319
consensus_3988#1 ------------------------------------------------------------
consensus_3988#0 GAACTACTCCACTAATTCGCTGTGGACATTGACATGGATTAAGATATGGCA 3370
consensus_3988#1 ---------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||