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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3992 cluster # 3992       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3992#0 length = 746 sequences # 3  

consensusID : consensus_3992#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 746
fasta sequence
                              [AAAAGAATAACTATTTTACTATAATAATATAACCCCCTCCGAAGACTCTAGTCCTTGGTATTTCCAGAAGGGCAGTAAATAAAAGCCTTTGGTTATGTTAGCATGAGTCAAAATTATTGCAATCCAAGCAACAAGATGTACAAGATTTGAGG-AATTACTAGTCCACAAGACATTCTACATGCCTAAGCCATGACAAAGATATTTATGAGAAATATGTTGGACTAAAGAATTTGCGAGATCAAAAGAAAAGATGTCCCATTTTATGCTTTGATTTCATGCAAGGTAAAGGATAGTTTTAATCTCTTAAACCCTAACAAGATCTATCGTCAACGTCTATATCATCAAGAAGACTTACGGTATGAAGCCAAGTGACAATTCAAATACTTGAGGGCTATGAAGGTACGTTCAACCGATGGAGCAATTTCAAATGAAGAACTACCGAGATAATAGAAATCCGGTTGAAGAACCTATGACTGTGGAAATTTAAGAAATATATGGAGATCAACAGA-TATGGGATGATGGCAACCATTCCAATTCATGGAGAACACTCTGAATACACTCAGCCAACCGAGAAGATTCATGAAAGCCACCGGAACCAGTTATAAGCCACCTCCACTTCCAAACCTTCTGAATAACCTGTACAAATTCTATAGTCAAGGCCAAACCCCATTGAATAACCTGTACAAACAAGATTTTGTACCCAAACCATCATCTACCCTACTTAGAAATATATGTAACCTAGAAGA]

[+] EMBL CF306230             [AAAAGAATAACTATTTTACTATAATAATATAACCCCCTCCGAAGACTCTAGTCCTTGGTATTTCCAGAAGGGCAGTAAATAAAAGCCTTTGGTTATGTTAGCATGAGTCAAAATTATTGCAATCCAAGCAACAAGATGTACAAGATTTGAGG AATTACTAGTCCACAAGACATTCTACATGCCTAAGCCATGACAAAGATATTTATGAGAAATATGTTGGACTAAAGAATTTGCGAGATCAAAAGAAAAGATGTCCCATTTTATGCTTTGATTTCATGCAAGGTAAAGGATAGTTTTAATCTCTTAAACCCTAACAAGATCTATCGTCAACGTCTATATCATCAAGAAGACTTACGGTATGAAGCCAAGTGACAATTCAAATACTTGAGGGCTATGAAGGTACGTTCAACCGATGGAGCAATTTCAAATGAAGAACTACCGAGATAATAGAAATCCGGTTGAAGAACCTATGACTGTGGAAATTTAAGAAATATATGGAGATCAACAGANTATGGGATGATGGCAACCATTCCAATTCATGGAGAACACTCTGAATACACTCAGCCAACCGAGAAGATTCATGAAAGCCACCGGAACCAGTTATAAGCCACCTCCACTTCCAAACCTTCTGAATAACCTGTACAAATTCTATAGTCAAGGCCAAACCCCATTGA                                                                         ]
[+] EMBL CF305877             [             TTTTACTATAATAATATAACCCCCTCCGAAGACTCTAGTCCTTGGTATTTCCAGAAGGGCAGTAAATAAAAGCCTTTGGTTATGTTAGCATGAGTCAAAATTATTGCAATCCAAGCAACAAGATGTACAAGATTTGAGGTATTTACTAGTCCACAAGACATTCTACATGCCTAAGCCATGACAAAGATATTTATGAGAAATATGTTGGACTAAAGAATTTGCGAGATCAAAAGAAAAGATGTCCCATTTTATGCTTTGATTTCATGCAAGGTAAAGGATAGTTTTAATCTCTTAAACCCTAACAAGATCTATCGTCAACGTCTATATCATCAAGAAGACTTACGGTATGAAGCCAAGTGACAATTCAAATACTTGAGGGCTATGAAGGTACGTTCAACCGATGGAGCAATTTCAAATGAAGAACTACCGAGATAATAGAAATCCGGTTGAAGAACCTATGACTGTGGAAATTTAAGAAATATATGGAGATCAACAGA TATGGGATGATGGCAACCATTCCAATTCATGGAGAACACTCTGAATACACTCAGCCAACCGAGAAGATTCATGAAA                                                                                                                                                                 ]
[+] EMBL CF307038             [                                                                                                 TTAGCATGAGTCAAAATTATTGCAATCCAAGCAACAAGATGTACAAGATTTGAGG AATTACTAGTCCACAAGACATTCTACATGCCTAAGCCATGACAAAGATATTTATGAGAAATATGTTGGACTAAAGAATTTGCGAGATCAAAAGAAAAGATGTCCCATTTTATGCTTTGATTTCATGCAAGGTAAAGGATAGTTTTAATCTCTTAAACCCTAACAAGATCTATCGTCAACGTCTATATCATCAAGAAGACTTACGGTATGAAGCCAAGTGACAATTCAAATACTTGAGGGCTATGAAGGTACGTTCAACCGATGGAGCAATTTCAAATGAAGAACTACCGAGATAATAGAAATCCGGTTGAAGAACCTATGACTGTGGAAATTTAAGAAATATATGGAGATCAACAGA TATGGGATGATGGCAACCATTCCAATTCATGGAGAACACTCTGAATACACTCAGCCAACCGAGAAGATTCATGAAAGCCACCGGAACCAGTTATAAGCCACCTCCACTTCCAAACCTTCTGAATAACCTGTACAAATTCTATAGTCAAGGCCAAACCCCATTGAATAACCTGTACAAACAAGATTTTGTACCCAAACCATCATCTACCCTACTTAGAAATATATGTAACCTAGAAGA]


>consensus_3992#0 AAAAGAATAACTATTTTACTATAATAATATAACCCCCTCCGAAGACTCTAGTCCTTGGTA TTTCCAGAAGGGCAGTAAATAAAAGCCTTTGGTTATGTTAGCATGAGTCAAAATTATTGC AATCCAAGCAACAAGATGTACAAGATTTGAGGAATTACTAGTCCACAAGACATTCTACAT GCCTAAGCCATGACAAAGATATTTATGAGAAATATGTTGGACTAAAGAATTTGCGAGATC AAAAGAAAAGATGTCCCATTTTATGCTTTGATTTCATGCAAGGTAAAGGATAGTTTTAAT CTCTTAAACCCTAACAAGATCTATCGTCAACGTCTATATCATCAAGAAGACTTACGGTAT GAAGCCAAGTGACAATTCAAATACTTGAGGGCTATGAAGGTACGTTCAACCGATGGAGCA ATTTCAAATGAAGAACTACCGAGATAATAGAAATCCGGTTGAAGAACCTATGACTGTGGA AATTTAAGAAATATATGGAGATCAACAGATATGGGATGATGGCAACCATTCCAATTCATG GAGAACACTCTGAATACACTCAGCCAACCGAGAAGATTCATGAAAGCCACCGGAACCAGT TATAAGCCACCTCCACTTCCAAACCTTCTGAATAACCTGTACAAATTCTATAGTCAAGGC CAAACCCCATTGAATAACCTGTACAAACAAGATTTTGTACCCAAACCATCATCTACCCTA CTTAGAAATATATGTAACCTAGAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)