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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3996#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1289 fasta sequence
[GAGCGCTGCCATCCTCTCCTCCTAGCTAGGTCGATCGACGTCGAGAATGGCAGATCGGCAGCAGCAGCACGCGCACGGCGAGGGCCGGACGGCGGCGCAGCGCCTCGGGTACGCGCCCGCGGCGTCGGCGGACTCGCCGTCGACGACGCTGCTCCGGCGGGTGCAGACGCACGCGCCGAACTCCACCCAGGTGGTCGGCTTCCTCACGCTGGCCGTCTCCGGCGCCGTCCTCCTGCTCCTGACCGGGCTCACGCTCACCGGCGCCGTCGTGGCGCTCATCTTCCTGGGGCCGATCGCGCTGCTCACCAGCCCCATCTGGGTGCCCGTCGCCGTCGCGCTCTTCGTGCTCGCCGCGGCCGCGCTCTCCGCCTGCGCCTTCGTCGTCGTCGCC-GTCGCCGCCGGCACGTGGATGTACCGCTACTTCACGGGGAGGCACCCCGTCGGCGCCGACCGGGTGGACTACGCGCGCAGCCGGATCGCCGACACGGC-TAGCCACGTCAAGGAC-TACGCGCGCGA-GTACGGCGGCTACCTGCATAGCCGGGC-CAAGGATGCCGCGCCCGGCGCGTAAGCCGCCCGC-GC-GC-GCC-ACATGTGTGTC-GGTGTGTGGCATGCAGCTTAGATGTGATCGTTCTTCTTCGGTGTGTTTGTGTTGTCGATTTCCTCACTTCTTCTGTAGGCTACTTTAATTTGGTATTTTGA---TCTTCTTCTTCTCTGGATCGTACGTCACTCGGGTTGTATTTAGTTTGGATCATAAGACGTCGCACCGGGCTGAATTGATCTTCGTCATTTGGCCTGATTCGATCTCGCAATGGTCGATCGCAATTCCTCCCAGCTCGAGGTTACGCTCAATGACGACTCTTTGCGTGTGAGATGTGACCTAGCTAGAAAAGTCCAAAATTTTATCGTTTTCGCAAAGCAAAAGATGTGAAGAAGCAAACGGCACAGCATTAAACAAGCAAGAAGTTAACCAAACAATCTGAATTGGAAGCGGTTTTGATATGTTTTTTCAGTTGGGACTGGAGGCGAGCGGCGCCACAAACCAAATTCTGCCTCACCAAATGAGCTGAGATCAGCGTGCAACGGCGCAACCAGTTCCGTGCAACAGTCGAAGATGCATTCAGAGATCAGTGCGCCCACCAGTTCCAGTCGAGCAGAGGGCATCCGCCATGCCGGCAACAACACCGAACCATCGCATCACGAACCGCCGTGAAGACCGAAGAAGAAACAGGGAGACAGGGTAGAGATAGGAGAGGAGGGGATGACACGTGGGGCCTATTCTTAAAAAAGATGAA]
[+] EMBL AK108377 [GAGCGCTGCCATCCTCTCCTCCTAGCTAGGTCGATCGACGTCGAGAATGGCAGATCGGCAGCAGCAGCACGCGCACGGCGAGGGCCGGACGGCGGCGCAGCGCCTCGGGTACGCGCCCGCGGCGTCGGCGGACTCGCCGTCGACGACGCTGCTCCGGCGGGTGCAGACGCACGCGCCGAACTCCACCCAGGTGGTCGGCTTCCTCACGCTGGCCGTCTCCGGCGCCGTCCTCCTGCTCCTGACCGGGCTCACGCTCACCGGCGCCGTCGTGGCGCTCATCTTCCTGGGGCCGATCGCGCTGCTCACCAGCCCCATCTGGGTGCCCGTCGCCGTCGCGCTCTTCGTGCTCGCCGCGGCCGCGCTCTCCGCCTGCGCCTTCGTCGTCGTCGCC GTCGCCGCCGGCACGTGGATGTACCGCTACTTCACGGGGAGGCACCCCGTCGGCGCCGACCGGGTGGACTACGCGCGCAGCCGGATCGCCGACACGGC TAGCCACGTCAAGGAC TACGCGCGCGA GTACGGCGGCTACCTGCATAGCCGGGC CAAGGATGCCGCGCCCGGCGCGTAAGCCGCCCGC GC GC GCC ACATGTGTGTC GGTGTGTGGCATGCAGCTTAGATGTGATCGTTCTTCTTCGGTGTGTTTGTGTTGTCGATTTCCTCACTTCTTCTGTAGGCTACTTTAATTTGGTATTTTGA TCTTCTTCTTCTCTGGATCGTACGTCACTCGGGTTGTATTTAGTTTGGATCATAAGACGTCGCACCGGGCTGAATTGATCTTCGTCATTTGGCCTGATTCGATCTCGCAATGGTCGATCGCAATTCCTCCCAGCTCGAGGTTACGCTCAATGACGACTCTTTGCGTGTGAGATGTGACCTAGCTAGAAAAGTCCAAAATTTTATCGTTTTCGCAAAGCAAAAGATGTGAAGAAGCAAACGGCACAGCATTAAACAAGCAAGAAGTTAACCAAACAATCTGAATTGGAAGCGGTTTTGATATGTTTTTTCAGTTGGGACTGGAGGCGAGCGGCGCCACAAACCAAATTCTGCCTCACCAAATGAGCTGAGATCAGCGTGCAACGGCGCAACCAGTTCCGTGCAACAGTCGAAGATGCATTCAGAGATCAGTGCGCCCACCAGTTCCAGTCGAGCAGAGGGCATCCGCCATGCCGGCAACAACACCGAACCATCGCATCACGAACCGCCGTGAAGACCGAAGAAGAAACAGGGAGACAGGGTAGAGATAGGAGAGGAGGGGATGACACGTGGGGCCTATTCTTAAAAAAGATGAA]
[+] EMBL AK063599 [ GCGCTGCCATCCTCTCCTCCTAGCTAGGTCGATCGACGTCGAGAATGGCAGATCGGCAGCAGCAGCACGCGCACGGCGAGGGCCGGACGGCGGCGCAGCGCCTCGGGTACGCGCCCGCGGCGTCGGCGGACTCGCCGTCGACGACGCTGCTCCGGCGGGTGCAGACGCACGCGCCGAACTCCACCCAGGTGGTCGGCTTCCTCACGCTGGCCGTCTCCGGCGCCGTCCTCCTGCTCCTGACCGGGCTCACGCTCACCGGCGCCGTCGTGGCGCTCATCTTCCTGGGGCCGATCGCGCTGCTCACCAGCCCCATCTGGGTGCCCGTCGCCGTCGCGCTCTTCGTGCTCGCCGCGGCCGCGCTCTCCGCCTGCGCCTTCGTCGTCGTCGCC GTCGCCGCCGGCACGTGGATGTACCGCTACTTCACGGGGAGGCACCCCGTCGGCGCCGACCGGGTGGACTACGCGCGCAGCCGGATCGCCGACACGGC TAGCCACGTCAAGGAC TACGCGCGCGA GTACGGCGGCTACCTGCATAGCCGGGC CAAGGATGCCGCGCCCGGCGCGTAAGCCGCCCGC GC GC GCC ACATGTGTGTC GGTGTGTGGCATGCAGCTTAGATGTGATCGTTCTTCTTCGGTGTGTTTGTGTTGTCGATTTCCTCACTTCTTCTGTAGGCTACTTTAATTTGGTATTTTGA TCT ]
[+] EMBL BI802432 [ CTTCGTCGTCGTCGCCTGTC CC CCGGCACGTGGATGTACCGCTACTTCACGGGGAGCCACCCCGTCGGCCCCGACCGGGTGGATTACGCGC CA CCGGTTCCCCGACACGGCTTAGCCACGTCAAGGACTTACGCGCGCGATGTACGGCGGCTACCTGCATACCCGGCCACAAGGATCCCGCCCCCGGCGCGTAA CCCCCCGCAGCAGCAGCCAACATGTGTGTCAGGTGTGTGGCATCCAGCTTAGATGTGATCGTTCTTCTTCGGTGTGTTTGTGTTGTCGATTTCCTCACTTCTTCTGTAGGCTACTTTAATTTGGTATTTGGATCTTCTTCTTCTTCTCTGGATCGTACGTCACTCGGGTTGTATTTAGTTTGGATCATAAGACGTCGCACCGGGCTGAATTGATCTTCGTCATTTGCCCTGATTCGATCTCCCAATGGTCGATC CAATTCCTCCCAGCTCGAGGTTACGCTCAAaaaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||