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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4010 cluster # 4010       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4010#0 length = 1111 sequences # 3  

consensusID : consensus_4010#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1111
fasta sequence
                              [CACGTCTCAGTACACCTGAGTCCTTCAGGCCCTGTCCCTCTCTACAGGCAAGATTGCAGCCACTGGTGCTTGCCTGGGGTCCCTGATACCTGGAATGAGCTTGTCTACAACCTCTTGTTGAAAAGACAATCTATGATAGGTCAAAATGTACCTCTTGTTGGCACCAAAACACTGAAAGCTGGCTGGCGAAAGCTAAATAAGTACAACTTGACAATTTGAAGAGGGAAGTAAATCCAGCAGCTCATCAGGACAGAACAAAGCTTCATCCAGTGTCTTGGGTGATGCTGCTCCTCAGCTGATCCATTCACTTCCCAACGAGTAGGTAATAGTAGTTATCCTAGTGAGTGGACACATTTTTGGAACATTTTAGAGTTGGTTGGCAGGAAGCTGCACCGCTCTGCTCTGATCTGTAGTAGCTTAGCCTGTATTGCCAAGGTGATATGCTATCTTGGTATTTCATACAGAGAGGTTATGAGGTGAGCATAGCTAGCTAGGAGCTCCAGCAATGAATGATGTAAATATATAATTCTACTACAATCCGCGAGAAAC-GTGACTGTTTCGATTCAAGGGGAGCATTGTGAGTAGCTGTGACTGNTTCAGAGCATGTGCATTATTTCAGCTGCTGCCTCTGGATAGAACGCATAGTTGGCCAGTTGGGATCGTTTCTGCCCGATCTTACACGTTTGTCTGATGATGAATGGAGCCAGCACGTTTGTCTGTCACGGCACGCTGCCGTAGTGCTGCCCCATCTTGCCGGCATCCTGTCCCGGTTGACGCAATTCTGTAATTCACTGCAGCCGACTACCAAGTTTAGTTGTAGAGTTATGGATTTTGGTCTGCACTGTAAGATGGGCACTACTGGTTACTTCAGCTAACAAGTACTACTTGTGTATAGGCTGGGTTTAATATAAATCTATTATCTAAAAAACAAGTACTACTGGTTCTGGTCTGTTTTTATACTTGTTACTTCAGCTAACAAGAGATGTCTAGTTGTAGTGAAATATATATTCCCTCCACCTAAATTTTTCTTACTATTTTATTTTCCTATTTGTAATTTCTATGTATCCAAGACTTGAATGAAGAGAGTATATCTTTGTTTAGCAACAAAAAA]

[+] EMBL CA765351             [CACGTCTCAGTACACCTGAGTCCTTCAGGCCCTGTCCCTCTCTACAGGCAAGATTGCAGCCACTGGTGCTTGCCTGGGGTCCCTGATACCTGGAATGAGCTTGTCTACAACCTCTTGTTGAAAAGACAATCTATGATAGGTCAAAATGTACCTCTTGTTGGCACCAAAACACTGAAAGCTGGCTGGCGAAAGCTAAATAAGTACAACTTGACAATTTGAAGAGGGAAGTAAATCCAGCAGCTCATCAGGACAGAACAAAGCTTCATCCAGTGTCTTGGGTGATGCTGCTCCTCAGCTGATCCATTCACTTCCCAACGAGTAGGTAATAGTAGTTATCCTAGTGAGTGGACACATTTTTGGAACATTTTAGAGTTGGTTGGCAGGAAGCTGCACCGCTCTGCTCTGATCTGTAGTAGCTTAGCCTGTATTGCCAAGGTGATATGCTATCTTGGTATTTCATACAGAGAGGTTATGAGGTGAGCATAGCTAGCTAGGAGCTCCAGCAATGAATGATGTAAATATATAATTCTACTACAATCCGCGAGAAAC GTGACTGTTTCGATTCAAGGGGAGCATTGTGAGTAGCTGTGACTGNTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA757643             [                                                                                                                                                               GGCACCAGAACACTGAAAGCTGGCTGGCGAAAGCTAAATAAGTACAACTTGACAATTTGAAGAGGGAAGTAAATCCAGCAGCTCATCAGGACAGAACAAAGCTTCATCCAGTGTCTTGGGTGATGCTGCTCCTCAGCTGATCCATTCACTTCCCAACGAGTAGGTAATAGTAGTTATCCTAGTGAGTGGACACATTTTTGGAACATTTTAGAGTTGGTTGGCAGGAAGCTGCACCGCTCTGCTCTGATCTGTAGTAGCTTAGCCTGTATTGCCAAGGTGATATGCTATCTTGGTATTTCATACAGAGAGGTTATGAGGTGAGCATAGCTAGCTAGGAGCTCCAGCAATGAATGATGTAAATATATAATTCTACTACAATCCGCGAGAAAC GTGACTGTTTCGATTCAGATGGA CATTaaatagta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU101016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAGAGGTTATGAGGTGAGCATAGCTAGCTAGGAGCTCCAGCAATGAATGATGTAAATATATAATTCTACTACAATCCGCGAGAAACGGTGACTGTTTCGATTCAAGGGGAGCATTGTGAGTAGCTGTGACTGTTTCAGAGCATGTGCATTATTTCAGCTGCTGCCTCTGGATAGAACGCATAGTTGGCCAGTTGGGATCGTTTCTGCCCGATCTTACACGTTTGTCTGATGATGAATGGAGCCAGCACGTTTGTCTGTCACGGCACGCTGCCGTAGTGCTGCCCCATCTTGCCGGCATCCTGTCCCGGTTGACGCAATTCTGTAATTCACTGCAGCCGACTACCAAGTTTAGTTGTAGAGTTATGGATTTTGGTCTGCACTGTAAGATGGGCACTACTGGTTACTTCAGCTAACAAGTACTACTTGTGTATAGGCTGGGTTTAATATAAATCTATTATCTAAAAAACAAGTACTACTGGTTCTGGTCTGTTTTTATACTTGTTACTTCAGCTAACAAGAGATGTCTAGTTGTAGTGAAATATATATTCCCTCCACCTAAATTTTTCTTACTATTTTATTTTCCTATTTGTAATTTCTATGTATCCAAGACTTGAATGAAGAGAGTATATCTTTGTTTAGCAACAAAAAA]


>consensus_4010#0 CACGTCTCAGTACACCTGAGTCCTTCAGGCCCTGTCCCTCTCTACAGGCAAGATTGCAGC CACTGGTGCTTGCCTGGGGTCCCTGATACCTGGAATGAGCTTGTCTACAACCTCTTGTTG AAAAGACAATCTATGATAGGTCAAAATGTACCTCTTGTTGGCACCAAAACACTGAAAGCT GGCTGGCGAAAGCTAAATAAGTACAACTTGACAATTTGAAGAGGGAAGTAAATCCAGCAG CTCATCAGGACAGAACAAAGCTTCATCCAGTGTCTTGGGTGATGCTGCTCCTCAGCTGAT CCATTCACTTCCCAACGAGTAGGTAATAGTAGTTATCCTAGTGAGTGGACACATTTTTGG AACATTTTAGAGTTGGTTGGCAGGAAGCTGCACCGCTCTGCTCTGATCTGTAGTAGCTTA GCCTGTATTGCCAAGGTGATATGCTATCTTGGTATTTCATACAGAGAGGTTATGAGGTGA GCATAGCTAGCTAGGAGCTCCAGCAATGAATGATGTAAATATATAATTCTACTACAATCC GCGAGAAACGTGACTGTTTCGATTCAAGGGGAGCATTGTGAGTAGCTGTGACTGNTTCAG AGCATGTGCATTATTTCAGCTGCTGCCTCTGGATAGAACGCATAGTTGGCCAGTTGGGAT CGTTTCTGCCCGATCTTACACGTTTGTCTGATGATGAATGGAGCCAGCACGTTTGTCTGT CACGGCACGCTGCCGTAGTGCTGCCCCATCTTGCCGGCATCCTGTCCCGGTTGACGCAAT TCTGTAATTCACTGCAGCCGACTACCAAGTTTAGTTGTAGAGTTATGGATTTTGGTCTGC ACTGTAAGATGGGCACTACTGGTTACTTCAGCTAACAAGTACTACTTGTGTATAGGCTGG GTTTAATATAAATCTATTATCTAAAAAACAAGTACTACTGGTTCTGGTCTGTTTTTATAC TTGTTACTTCAGCTAACAAGAGATGTCTAGTTGTAGTGAAATATATATTCCCTCCACCTA AATTTTTCTTACTATTTTATTTTCCTATTTGTAATTTCTATGTATCCAAGACTTGAATGA AGAGAGTATATCTTTGTTTAGCAACAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)