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Oryza sativa
cluster # 4011 cluster # 4011       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4011#0 length = 830 sequences # 3  

consensusID : consensus_4011#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 830
fasta sequence
                              [GCCGAGAAGAAGAGGCGACGAGAGTGACAGGCCGAGGAGGGAGGGGGATTCGAGGATCGCATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGGCGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTTGCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCTGCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACATGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCA]

[+] EMBL CB641915             [GCCGAGAAGAAGAGGCGACGAGAGTGACAGGCCGAGGAGGGAGGGGGATTCGAGGATCGCATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGGCGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTTGCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCTGCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACATGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCA]
[+] EMBL CB641916             [GCCCATAAGAAGAGGCGACGAGAGTGACAGGCCGAGGAGGGAGGGGGATTCGAGGATCGCATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGGCGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTTGCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACA                                                                                                                                 ]
[+] EMBL CF307815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTT ACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTT GTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACT                                                                                                                                                                                                                                                                                ]


>consensus_4011#0 GCCGAGAAGAAGAGGCGACGAGAGTGACAGGCCGAGGAGGGAGGGGGATTCGAGGATCGC ATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGGCGGAG GGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGG TCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGC ATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAA GTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGAT GAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTC ATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCA AGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGAC TTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGG CGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTT GCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCT GCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACA TGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)