cluster # 4012

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Oryza sativa
cluster # 4012 cluster # 4012 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4012#0 length = 833 sequences # 3

consensusID : consensus_4012#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 833
fasta sequence

                              [CCCTCCTGTGAAAGAAAGGCATTGTGAGAGCCCAAATCCTGGCTAGTTTCATTGGTCCAAGTGCTGAGCTACTGATACCAACAACCGCCATCGGAGAGAATGGGCGTGGACGACATCATCGCCGAGCTGCGCGTGCTGCCGGCCAAGATCCTTCTCAAGAAGAAGCCCAAGCAGTTCCAGAAGGTGGAGGTGAAGGTTCGGATGGACTGCGAAGGGTGCGAGAGGAAGGTCCGGAAAGCAGTTGAGGAGATGAAGGGCGTTA-CAGCGTNGAGGTTGCCGCGACG-AGAACAAGGTTACGGTNACGGGTTACGTGGAGCAGGAGGAGGTGGTGGGGCGGCTGCGGCGTCGCGCCGGGAAGAAGGCGGAGCCGTGGCCGTACGTGCCGTACGACGTGGTGCCCCACCCCTACGCCCCCGGCGCGTACGACAAGAAGGCTCCCCCCGGCTACG-TCCGCAACGCGCTCGCCGACCCGGACGCCGCGCCGCTCGCCCGCGCCACCGAGGAAGAGGAGAAGCTTGCCTCCGCCTTCAGCGACGAGAACCCCAACTCCTGCGCCGTCATGTAGTATAGCCATTATAGTTAGCTAGTCATGCACCCATGCGGCCATGCCATGTCTTATTGTTTTTTTTTTTTAAGTGTGCTGCTTTGTTTTGAGCTTGTAGTCTCAAGTGTGTCTGTGTGCAGTCTGTTCGCCGCTACGCTTTGTACACTGATTATTAGTTGGGAGTTGTAGGATGAGTCCCTCGTGGCTGTCAAAGTTTTGCCTAAAATTTTTGTATGAAACGTGTTTGAGTACGATCGAGATGAGCAAATGTTTCTTTGGCTCATAAAAA]

[+] EMBL C29149               [CCCTCCTGTGAAAGAAAGGCATTGTGAGAGCCCAAATCCTGGCTAGTTTCATTGGTCCAAGTGCTGAGCTACTGATACCAACAACCGCCATCGGAGAGAATGGGCGTGGACGACATCATCGCCGAGCTGCGCGTGCTGCCGGCCAAGATCCTTCTCAAGAAGAAGCCCAAGCAGTTCCAGAAGGTGGAGGTGAAGGTTCGGATGGACTGCGAAGGGTGCGAGAGGAAGGTCCGGAAAGCAGTTGAGGAGATGAAGGGCGTTA CAGCGTNGAGGTTGCCGCGACG AGAACAAGGTTACGGTNACGGGTTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK105367             [                             GCCCAAATCCTGGCTAGTTTCATTGGTCCAAGTGCTGAGCTACTGATACCAACAACCGCCATCGGAGAGAATGGGCGTGGACGACATCATCGCCGAGCTGCGCGTGCTGCCGGCCAAGATCCTTCTCAAGAAGAAGCCCAAGCAGTTCCAGAAGGTGGAGGTGAAGGTTCGGATGGACTGCGAAGGGTGCGAGAGGAAGGTCCGGAAAGCAGTGGAGGAGATGAAGGGCGTGAGCAGCGTGGAGGTGGACGCGAAGCAGAACAAGGTGACGGTGACGGGTTACGTGGAGCAGGAGGAGGTGGTGGGGCGGCTGCGGCGTCGCGCCGGGAAGAAGGCGGAGCCGTGGCCGTACGTGCCGTACGACGTGGTGCCCCACCCCTACGCCCCCGGCGCGTACGACAAGAAGGCTCCCCCCGGCTACG TCCGCAACGCGCTCGCCGACCCGGACGCCGCGCCGCTCGCCCGCGCCACCGAGGAAGAGGAGAAGCTTGCCTCCGCCTTCAGCGACGAGAACCCCAACTCCTGCGCCGTCATGTAGTATAGCCATTATAGTTAGCTAGTCATGCACCCATGCGGCCATGCCATGTCTTATTGTTTTTTTTTTTTAAGTGTGCTGCTTTGTTTTGAGCTTGTAGTCTCAAGTGTGTCTGTGTGCAGTCTGTTCGCCGCTACGCTTTGTACACTGATTATTAGTTGGGAGTTGTAGGATGAGTCCCTCGTGGCTGTCAAAGTTTTGCCTAAAATTTTTGTATGAAACGTGTTTGAGTACGATCGAGATGAGCAAATGTTTCTTTGGCTCATAA   ]
[+] EMBL AU101038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTACGTTCCGCAACGCGTTCGCCGACCCGGACGNCGCGCCGCTCGCCCGCGCCACCGAGGAAGAGGAGAAGCTTGCCTCCGCCTTCAGCGACGAGAACCCCAACTCCTGCGCCGTCATGTAGTATAGCCATTATAGTTAGCTAGTCATGCACCCATGCGGCCATGCCATGTCTTATTG TTTTTTTTTTTAAGTGTGCTGCTTTGTTTTGAGCTTGTAGTCTCAAGTGTGTCTGTGTGCAGTCTGTTCG TTCTACGCTTTGTACACTGATTATTAGTTGGGAGTTGTAGGATGAGTCCCTCGTGGCTGTCAAAGTTTTGCCTAAAATTTTTGTATGAAACGTGTTTGAGTACGATCGAGATGAGCAAATGTTTCTTTGGCTCAAAAAAA]




>consensus_4012#0
CCCTCCTGTGAAAGAAAGGCATTGTGAGAGCCCAAATCCTGGCTAGTTTCATTGGTCCAA
GTGCTGAGCTACTGATACCAACAACCGCCATCGGAGAGAATGGGCGTGGACGACATCATC
GCCGAGCTGCGCGTGCTGCCGGCCAAGATCCTTCTCAAGAAGAAGCCCAAGCAGTTCCAG
AAGGTGGAGGTGAAGGTTCGGATGGACTGCGAAGGGTGCGAGAGGAAGGTCCGGAAAGCA
GTTGAGGAGATGAAGGGCGTTACAGCGTNGAGGTTGCCGCGACGAGAACAAGGTTACGGT
NACGGGTTACGTGGAGCAGGAGGAGGTGGTGGGGCGGCTGCGGCGTCGCGCCGGGAAGAA
GGCGGAGCCGTGGCCGTACGTGCCGTACGACGTGGTGCCCCACCCCTACGCCCCCGGCGC
GTACGACAAGAAGGCTCCCCCCGGCTACGTCCGCAACGCGCTCGCCGACCCGGACGCCGC
GCCGCTCGCCCGCGCCACCGAGGAAGAGGAGAAGCTTGCCTCCGCCTTCAGCGACGAGAA
CCCCAACTCCTGCGCCGTCATGTAGTATAGCCATTATAGTTAGCTAGTCATGCACCCATG
CGGCCATGCCATGTCTTATTGTTTTTTTTTTTTAAGTGTGCTGCTTTGTTTTGAGCTTGT
AGTCTCAAGTGTGTCTGTGTGCAGTCTGTTCGCCGCTACGCTTTGTACACTGATTATTAG
TTGGGAGTTGTAGGATGAGTCCCTCGTGGCTGTCAAAGTTTTGCCTAAAATTTTTGTATG
AAACGTGTTTGAGTACGATCGAGATGAGCAAATGTTTCTTTGGCTCATAAAAA

clustalw multiple alignements is not computed in this case