cluster # 4023

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Oryza sativa
cluster # 4023 cluster # 4023 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4023#0 length = 2161 sequences # 3
consensusID : consensus_4023#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2161
fasta sequence
                              [GAACGACGCCGGAAATAGCAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAACTCGCCGCCGCCGCCGCGGCCGCGCCCCCACCTCGATCTCCCGCGTCGCCACCCCGAACGCCGCGCCGCCGATGCTGCCGCCCCGCCTCCGCCGCCCTGCCGCCGGCGACCTCTGCTGACGAGCATGGCCGCCGCGGCCCCCGCCGGCGCCCAGAACCGCTGCGTCTTCGTCGGGAACATTCCTTACGATGCGACGGAGGAGCAGCTCGTGCAGATTTGCGAGGAAGTCGGCCCTGTGGTCTCATTCAGATTGGTTATTGATAAAGAAACAGGGAAGCCAAAGGGTTATGGGTTTTGTGAGTACAAGGATGAGGAGACTGCTCTAAGTGCACGCCGGAACCTTCAAGGTTATGAAATTAATGGCCGTCAGTTACGTGTTGATTTTGCTGAAAATGGGAGGAATGCTGACAGAAACAGAGAAAAGGGTCGTGGAGGACCTGGAATGGCATCCAGTGTTGATACTCAGAAACAATTAGCTGGGACTCCGGTTGTAGGCGATACAGGTCTTCATCAGCCAGTTGGTCTTCCATCGGCTATTCATGCTGCATCTGTGATGGCTGGTATTCTTGGAGGATCTCAAACTGCAAATGTTCAAAATGGTTTACCTGTCCAGTATGGGCTTGGAAATGACCCTCTTACTCATTATTTGGCCAGAATGTCAAAGCACCAGTTGTATGAAATCATGTCTGAGTTGAAGTCCCTAACTAGTCAAAATAAGGATGTTGCCAACAAACTGCTGCAAGGAATTCCACAGCTGTCAAAGGCCCTATTTCAGTCACAAATAATGCTTGGAATGGTGACGCCCCAGATGATGCAGATGGCAAAGAGCCAACAGCCCTCTAGCTCCTTGGCACAATCATCATCTCACATAAGCGAACCATTTCCACAGCCAGATGCTATGATATCAAGTGTTCCAAGACCTTCTGCAAGCTTGCCAAACCCAAATGTCCTGCAGGACCCTTCTGCACAGCTGCATAATTTTCCTCAGTATCCGCATTCATCTCAGCCTGCGGGCACAATATTTCCACATGGAAGTCAGTCTGGGGTGGGCATACATCCTCCAATTGTATCTCAACTCCTTGGTGCCTCTTCCAGTGTTCCTCCTCTACCCCTTGCTACCTCAGGAAGCCTGATATCGCAGGTTCAGCCCCCATTTATGCCACATCACCCTAGGCCACCAGCTATGCCAGCGGGTATGCAACAACTACCATTGACTCATCCACATGTTCCCCAGGTACCTGCTATACCTGATATAGCACAGAAGGAAATGAGGTTTCCTGAGCAAGCAAATCGTTCGACGGAGTTTGCTCATCATCCAAAGTTGCGAAAATTGGAGGATGGAACATCCACACCTGGAATTGTAAACAACAATCCAGCTGTTTATCCTGCTCCATCCCAAGGAATGCTCCCTGGTGGACCATCAGGGAGCTATAATTCTGCTGCTGTTAGCTTCCAGCAGCCAGAGAACGAAGTGCCTCAGCTCACACCCGATGTTGAGTCGGCTCTTCTGCAGCAAGTCCTACAACTGACACCTGAGCAGCTTAGTTCGTTGCCAGTAGAGCAACAACAGCAGGTGATTCAGCTTCAAAAGATGCTATCGGCTGGTAAATAACCCCCATCTGAATCAGCATACCAAATTGTTGATCAAGCTATACAGAGTTGTGGAAAAAATGGTACATTTGTGAAGAAGAAACTGGGCGCATATGTCAACGGTTGATTTTGCCAAGCCACACCACCACACTTGTAACTTTGAAAATTGTTGGCATTTCTGGGCCATTAGTTTTGCTCAGGAGCATTCTTTGGAGATAAAATGTGATGGGAAAAGGCCTCTTATTGTCCATCACTTATGTATCATTATAGAAAAAAAGAATAATCTGTATCCATTTTTCTCATGTAATCTGTAGTGCAAGAACAATTTTGTCTTTAGAACTCTCTTAAAAGTAGTCCAGAGCTGTTTAGTTTGCTGTGTAATCTCCCAGCATCTTACTTTCTCTGTAGCTGTTTCTTCTCTCCCGGACTACATGTTTTGAAGTTAGTTGCTCAGATATTCGATTATTGCTGCTGCTTGATTCATTTACTACAGCCTGTGAGCGACTTTTGGAAAAAAAA]

[+] EMBL AK067921             [GAACGACGCCGGAAATAGCAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAACTCGCCGCCGCCGCCGCGGCCGCGCCCCCACCTCGATCTCCCGCGTCGCCACCCCGAACGCCGCGCCGCCGATGCTGCCGCCCCGCCTCCGCCGCCCTGCCGCCGGCGACCTCTGCTGACGAGCATGGCCGCCGCGGCCCCCGCCGGCGCCCAGAACCGCTGCGTCTTCGTCGGGAACATTCCTTACGATGCGACGGAGGAGCAGCTCGTGCAGATTTGCGAGGAAGTCGGCCCTGTGGTCTCATTCAGATTGGTTATTGATAAAGAAACAGGGAAGCCAAAGGGTTATGGGTTTTGTGAGTACAAGGATGAGGAGACTGCTCTAAGTGCACGCCGGAACCTTCAAGGTTATGAAATTAATGGCCGTCAGTTACGTGTTGATTTTGCTGAAAATGGGAGGAATGCTGACAGAAACAGAGAAAAGGGTCGTGGAGGACCTGGAATGGCATCCAGTGTTGATACTCAGAAACAATTAGCTGGGACTCCGGTTGTAGGCGATACAGGTCTTCATCAGCCAGTTGGTCTTCCATCGGCTATTCATGCTGCATCTGTGATGGCTGGTATTCTTGGAGGATCTCAAACTGCAAATGTTCAAAATGGTTTACCTGTCCAGTATGGGCTTGGAAATGACCCTCTTACTCATTATTTGGCCAGAATGTCAAAGCACCAGTTGTATGAAATCATGTCTGAGTTGAAGTCCCTAACTAGTCAAAATAAGGATGTTGCCAACAAACTGCTGCAAGGAATTCCACAGCTGTCAAAGGCCCTATTTCAGTCACAAATAATGCTTGGAATGGTGACGCCCCAGATGATGCAGATGGCAAAGAGCCAACAGCCCTCTAGCTCCTTGGCACAATCATCATCTCACATAAGCGAACCATTTCCACAGCCAGATGCTATGATATCAAGTGTTCCAAGACCTTCTGCAAGCTTGCCAAACCCAAATGTCCTGCAGGACCCTTCTGCACAGCTGCATAATTTTCCTCAGTATCCGCATTCATCTCAGCCTGCGGGCACAATATTTCCACATGGAAGTCAGTCTGGGGTGGGCATACATCCTCCAATTGTATCTCAACTCCTTGGTGCCTCTTCCAGTGTTCCTCCTCTACCCCTTGCTACCTCAGGAAGCCTGATATCGCAGGTTCAGCCCCCATTTATGCCACATCACCCTAGGCCACCAGCTATGCCAGCGGGTATGCAACAACTACCATTGACTCATCCACATGTTCCCCAGGTACCTGCTATACCTGATATAGCACAGAAGGAAATGAGGTTTCCTGAGCAAGCAAATCGTTCGACGGAGTTTGCTCATCATCCAAAGTTGCGAAAATTGGAGGATGGAACATCCACACCTGGAATTGTAAACAACAATCCAGCTGTTTATCCTGCTCCATCCCAAGGAATGCTCCCTGGTGGACCATCAGGGAGCTATAATTCTGCTGCTGTTAGCTTCCAGCAGCCAGAGAACGAAGTGCCTCAGCTCACACCCGATGTTGAGTCGGCTCTTCTGCAGCAAGTCCTACAACTGACACCTGAGCAGCTTAGTTCGTTGCCAGTAGAGCAACAACAGCAGGTGATTCAGCTTCAAAAGATGCTATCGGCTGGTAAATAACCCCCATCTGAATCAGCATACCAAATTGTTGATCAAGCTATACAGAGTTGTGGAAAAAATGGTACATTTGTGAAGAAGAAACTGGGCGCATATGTCAACGGTTGATTTTGCCAAGCCACACCACCACACTTGTAACTTTGAAAATTGTTGGCATTTGGGGGCCATTAGTTTTGCTAAGGAGCATTCTTTGGAGATAAAATGTGATGGGAAAAGGCCTCTTATTGTCCATCACTTATGTATCATTATAGAAAAAAAGAATAATCTGTATCCATTTTTCTCATGTAATCTGTAGTGCAAGAACAATTTTGTCTTTAGAACTCTCTTAAAAGTAGTCCAGAGCTGTTTAGTTTGCTGTGTAATCTCCCAGCATCTTACTTTCTCTGTAGCTGTTTCTTCTCTCCCGGACTACATGTTTTGAAGTTAGTTGCTCAG                                                                 ]
[-] EMBL CB662203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cnTAGGCCACCAGCTATGCCAGCGGGTATGCAACAACTACCATTGACTCATCCACATGTTCCCCAGGTACCTGCTATACCTGATATAGCACAGAAGGAAATGAGGTTTCCTGAGCAAGCAAATCGTTCGACGGAGTTTGCTCATCATCCAAAGTTGCGAAAATTGGAGGATGGAACATCCACACCTGGAATTGTAAACAACAATCCAGCTGTTTATCCTGCTCCATCCCAAGGAATGCTCCCTGGTGGACCATCAGGGAGCTATAATTCTGCTGCTGTTAGCTTCCAGCAGCCAGAGAACGAAGTGCCTCAGCTCACACCCGATGTTGAGTCGGCTCTTCTGCAGCAAGTCCTACAACTGACACCTGAGCAGCTTAGTTCGTTGCCAGTAGAGCAACAACAGCAGGTGATTCAGCTTCAAAAGATGCTATCGGCTGGTAAATAACCCCCATCTGAATCAGCATACCAAATTGTTGATCAAGCTATACAGAGTTGTGGAAAAAATGGTACATTTGTGAAGAAGAAACTGGGCGCATATGTCAACGGTTGATTTTGCCAAGCCACACCACCACACTTGTAACTTTGAAAATTGTTGGCATTTCTGGGCCATTAGTTTTGCTCAGGAGCATTCTTTGGAGATAAAATGTGATGGGAAAAGGCCTCTTATTGTCCATCACTTATGTATCATTATAGAAAAAAAGAATAATCTGTATCCATTTTTCTCATGTAATCTGTAGTGCAAGAACAATTTTGTCTTTAGAACTCTCTTAAAAGTAGTCCAGAGCTGTTT                                                                                                                                                        ]
[+] EMBL CA756831             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAGCCACACCACCACACTTGTAACTTTGAAAATTGTTGGCATTTCTGGGCCATTAGTTTTGCTCAAGAGCATTCTTTGGAGATAAAATGTGATGGGAAAAGGCCTCTTATTGTCCATCACTTATGTATCATTATAGAAAAAAAGAATAATCTGTATCCATTTTTCTCATGTAATCTGTAGTGCAAGAACAATTTTGTCTTTAGAACTCTCTTAAAAGTAGTCCACAGCTGTTTAGTTTGCTGTGTAATCTCCCAGCATCTTACTTTCTCTGTAGCTGTTTCTTCTCTCCCGGACTACATGTTTTGAAGTTAGTTGCTCAGATATTCGATTATTGCTGCTGCTTGATTCATTTACTACAGCCTGTGAGCGACTTTTGGAAAAAAAA]




>consensus_4023#0
GAACGACGCCGGAAATAGCAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAACTCGCCGC
CGCCGCCGCGGCCGCGCCCCCACCTCGATCTCCCGCGTCGCCACCCCGAACGCCGCGCCG
CCGATGCTGCCGCCCCGCCTCCGCCGCCCTGCCGCCGGCGACCTCTGCTGACGAGCATGG
CCGCCGCGGCCCCCGCCGGCGCCCAGAACCGCTGCGTCTTCGTCGGGAACATTCCTTACG
ATGCGACGGAGGAGCAGCTCGTGCAGATTTGCGAGGAAGTCGGCCCTGTGGTCTCATTCA
GATTGGTTATTGATAAAGAAACAGGGAAGCCAAAGGGTTATGGGTTTTGTGAGTACAAGG
ATGAGGAGACTGCTCTAAGTGCACGCCGGAACCTTCAAGGTTATGAAATTAATGGCCGTC
AGTTACGTGTTGATTTTGCTGAAAATGGGAGGAATGCTGACAGAAACAGAGAAAAGGGTC
GTGGAGGACCTGGAATGGCATCCAGTGTTGATACTCAGAAACAATTAGCTGGGACTCCGG
TTGTAGGCGATACAGGTCTTCATCAGCCAGTTGGTCTTCCATCGGCTATTCATGCTGCAT
CTGTGATGGCTGGTATTCTTGGAGGATCTCAAACTGCAAATGTTCAAAATGGTTTACCTG
TCCAGTATGGGCTTGGAAATGACCCTCTTACTCATTATTTGGCCAGAATGTCAAAGCACC
AGTTGTATGAAATCATGTCTGAGTTGAAGTCCCTAACTAGTCAAAATAAGGATGTTGCCA
ACAAACTGCTGCAAGGAATTCCACAGCTGTCAAAGGCCCTATTTCAGTCACAAATAATGC
TTGGAATGGTGACGCCCCAGATGATGCAGATGGCAAAGAGCCAACAGCCCTCTAGCTCCT
TGGCACAATCATCATCTCACATAAGCGAACCATTTCCACAGCCAGATGCTATGATATCAA
GTGTTCCAAGACCTTCTGCAAGCTTGCCAAACCCAAATGTCCTGCAGGACCCTTCTGCAC
AGCTGCATAATTTTCCTCAGTATCCGCATTCATCTCAGCCTGCGGGCACAATATTTCCAC
ATGGAAGTCAGTCTGGGGTGGGCATACATCCTCCAATTGTATCTCAACTCCTTGGTGCCT
CTTCCAGTGTTCCTCCTCTACCCCTTGCTACCTCAGGAAGCCTGATATCGCAGGTTCAGC
CCCCATTTATGCCACATCACCCTAGGCCACCAGCTATGCCAGCGGGTATGCAACAACTAC
CATTGACTCATCCACATGTTCCCCAGGTACCTGCTATACCTGATATAGCACAGAAGGAAA
TGAGGTTTCCTGAGCAAGCAAATCGTTCGACGGAGTTTGCTCATCATCCAAAGTTGCGAA
AATTGGAGGATGGAACATCCACACCTGGAATTGTAAACAACAATCCAGCTGTTTATCCTG
CTCCATCCCAAGGAATGCTCCCTGGTGGACCATCAGGGAGCTATAATTCTGCTGCTGTTA
GCTTCCAGCAGCCAGAGAACGAAGTGCCTCAGCTCACACCCGATGTTGAGTCGGCTCTTC
TGCAGCAAGTCCTACAACTGACACCTGAGCAGCTTAGTTCGTTGCCAGTAGAGCAACAAC
AGCAGGTGATTCAGCTTCAAAAGATGCTATCGGCTGGTAAATAACCCCCATCTGAATCAG
CATACCAAATTGTTGATCAAGCTATACAGAGTTGTGGAAAAAATGGTACATTTGTGAAGA
AGAAACTGGGCGCATATGTCAACGGTTGATTTTGCCAAGCCACACCACCACACTTGTAAC
TTTGAAAATTGTTGGCATTTCTGGGCCATTAGTTTTGCTCAGGAGCATTCTTTGGAGATA
AAATGTGATGGGAAAAGGCCTCTTATTGTCCATCACTTATGTATCATTATAGAAAAAAAG
AATAATCTGTATCCATTTTTCTCATGTAATCTGTAGTGCAAGAACAATTTTGTCTTTAGA
ACTCTCTTAAAAGTAGTCCAGAGCTGTTTAGTTTGCTGTGTAATCTCCCAGCATCTTACT
TTCTCTGTAGCTGTTTCTTCTCTCCCGGACTACATGTTTTGAAGTTAGTTGCTCAGATAT
TCGATTATTGCTGCTGCTTGATTCATTTACTACAGCCTGTGAGCGACTTTTGGAAAAAAA
A
clustalw multiple alignements is not computed in this case