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Oryza sativa
cluster # 4025 cluster # 4025       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4025#0 length = 1303 sequences # 3  

consensusID : consensus_4025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1303
fasta sequence
                              [GTGTATCGTTGCATGGTGCTGCAATCTCACGATGTATCGGATCTCTGCATCGGCAAGCCGCCGGTGAGGTGGCTGCCGCCGTCCTCCACCGTCGCCGATGCCATCGCCGAGATCGAGGCCGGCGGCGGCCGGGGTCCGGACGCTGCCGTCGCCGTGTGGGACGGGACGAAGGGGGAAGTGGATGGCAGGGTGTGCATGGCCGACGTGCACCTCTTCCTCTGCGGCGGCGACGGCGAGGCGGCCAGCCTGGCTTCCCCGGCCGCCGCGCTTCAGGCCACGCTCTCCGACCTCCTCGCCGCCGGCGCGCCGCCCGTCCGCCGCATCGAGCCCCACGCGAGTGTGGCGGAAGCGGTGGACGCCTTCTTGGACGACGCGCACTGCCTCGTCGTGCCGATCCGGGAGCGGTGGCGGCGCGCGGCGGCGGCGGGGGAGATGTGCATGTGCTGGCTCACGGTGGAGGACGTCGTGCGCTTCTTCGTCGGCTGCATCGGCCTCTTCGCCCCGACGGCCTCGCTCTCGGTTTCTCAGCTCGGCATCGTCCGCGAGGCCACGCTCGCCGTCGCCGCCGGCGACAGGGCGCTCTCCGCCGTGCCGCTCCTCAGCGCCGCGCTGGCGACGCACTCCTCCGTCGCCGTCATCACGGGCGCAGGCATCGCCCCCCGCCTCGCCGGCGAGGTGTCGCCGTCGGCGCTCTGCTCCTGCGACGTATCCGTCGCGGCGGCCATCGCCGCGCTCTCGGCTGGCGACCTCACGGCCTTCCTCCACCGCAGCGACCTCCGGTGCCGCCGCAACCTCCCCGGCATGGTCGACCTCCTGTACGCCGGCGACCCTTCGTCGTGGCCCCCCTCCCCCTCCTCCTCTTCCTCCTCCTCGTCGTCATCGTCGTCGTTATCCTCCTTCTCGTCTTCCTCCGACGACGAGGCGGAGGACGGGTACAAACACTATGCGCCAGCGCCGTGCGCGCGGCGAGACAACAACAGGCAGATCATCGCGTGCCACCCGGGGAGCTCGCTGGTGGCGGTGATGGCGCAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGGTGGACTTCGACGACGGCGAGCTGGTCGGCGTCGTCCGCTTCCTCGACGTGCTCTGGGTTCTTCGCGAACACCTCAACCAACCACCCCCTGATCTACCCATCGAATTTCTCATCAATTAATCCCAGTACTAAGCTTCGTTGATGTACATACGAGGACAAAAATTGCGACCATGAACTGAACCTTTTG-TTCATCTTAAATTTACGCCATGTGTTTCGTCGGCGGATGAACTTGAAACGA]

[+] EMBL AK109942             [GTGTATCGTTGCATGGTGCTGCAATCTCACGATGTATCGGATCTCTGCATCGGCAAGCCGCCGGTGAGGTGGCTGCCGCCGTCCTCCACCGTCGCCGATGCCATCGCCGAGATCGAGGCCGGCGGCGGCCGGGGTCCGGACGCTGCCGTCGCCGTGTGGGACGGGACGAAGGGGGAAGTGGATGGCAGGGTGTGCATGGCCGACGTGCACCTCTTCCTCTGCGGCGGCGACGGCGAGGCGGCCAGCCTGGCTTCCCCGGCCGCCGCGCTTCAGGCCACGCTCTCCGACCTCCTCGCCGCCGGCGCGCCGCCCGTCCGCCGCATCGAGCCCCACGCGAGTGTGGCGGAAGCGGTGGACGCCTTCTTGGACGACGCGCACTGCCTCGTCGTGCCGATCCGGGAGCGGTGGCGGCGCGCGGCGGCGGCGGGGGAGATGTGCATGTGCTGGCTCACGGTGGAGGACGTCGTGCGCTTCTTCGTCGGCTGCATCGGCCTCTTCGCCCCGACGGCCTCGCTCTCGGTTTCTCAGCTCGGCATCGTCCGCGAGGCCACGCTCGCCGTCGCCGCCGGCGACAGGGCGCTCTCCGCCGTGCCGCTCCTCAGCGCCGCGCTGGCGACGCACTCCTCCGTCGCCGTCATCACGGGCGCAGGCATCGCCCCCCGCCTCGCCGGCGAGGTGTCGCCGTCGGCGCTCTGCTCCTGCGACGTATCCGTCGCGGCGGCCATCGCCGCGCTCTCGGCTGGCGACCTCACGGCCTTCCTCCACCGCAGCGACCTCCGGTGCCGCCGCAACCTCCCCGGCATGGTCGACCTCCTGTACGCCGGCGACCCTTCGTCGTGGCCCCCCTCCCCCTCCTCCTCTTCCTCCTCCTCGTCGTCATCGTCGTCGTTATCCTCCTTCTCGTCTTCCTCCGACGACGAGGCGGAGGACGGGTACAAACACTATGCGCCAGCGCCGTGCGCGCGGCGAGACAACAACAGGCAGATCATCGCGTGCCACCCGGGGAGCTCGCTGGTGGCGGTGATGGCGCAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGGTGGACTTCGACGACGGCGAGCTGGTCGGCGTCGTCCGCTTCCTCGACGTGCTCTGGGTTCTTCGCGAACACCTCAACCAACCACCCCCTGATCTACCCATCGAATTTCTCATCAATTAATCCCAGTACTAAGCTTCGTTGATGTACATACGAGGACAAAAATTGCGACCATGAACTGAACCTTTTG TTCATCTTAAATTTACGCCATGTGTTTCGTCGGCGGATGAACTTGAAACGA]
[+] EMBL BI803543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTCTTCGCGAACACCTCAACCAACCACCCCCTGATCTACCCATCGAATTTCTCATCAATTAATCCCAGTACTAAGCTTCGTTGATGTACATACGAGGACAAAAATTGCGACCATGAACTGAACCTTTTG TTCAaaaaaaaaa                                      ]
[+] EMBL BI802988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCTTCGCGAACACCTCAACC ACCACCCCCTGATCTACCCATCGAATTTCTCATCAATTAATCCCAGTACTAAGCTTCGTTGATGTACATACGAGGAC AAAATTGCGACCATGCCCTGAACCTTTTGCTTCATCTTAAATTTAaaaaa                               ]


>consensus_4025#0 GTGTATCGTTGCATGGTGCTGCAATCTCACGATGTATCGGATCTCTGCATCGGCAAGCCG CCGGTGAGGTGGCTGCCGCCGTCCTCCACCGTCGCCGATGCCATCGCCGAGATCGAGGCC GGCGGCGGCCGGGGTCCGGACGCTGCCGTCGCCGTGTGGGACGGGACGAAGGGGGAAGTG GATGGCAGGGTGTGCATGGCCGACGTGCACCTCTTCCTCTGCGGCGGCGACGGCGAGGCG GCCAGCCTGGCTTCCCCGGCCGCCGCGCTTCAGGCCACGCTCTCCGACCTCCTCGCCGCC GGCGCGCCGCCCGTCCGCCGCATCGAGCCCCACGCGAGTGTGGCGGAAGCGGTGGACGCC TTCTTGGACGACGCGCACTGCCTCGTCGTGCCGATCCGGGAGCGGTGGCGGCGCGCGGCG GCGGCGGGGGAGATGTGCATGTGCTGGCTCACGGTGGAGGACGTCGTGCGCTTCTTCGTC GGCTGCATCGGCCTCTTCGCCCCGACGGCCTCGCTCTCGGTTTCTCAGCTCGGCATCGTC CGCGAGGCCACGCTCGCCGTCGCCGCCGGCGACAGGGCGCTCTCCGCCGTGCCGCTCCTC AGCGCCGCGCTGGCGACGCACTCCTCCGTCGCCGTCATCACGGGCGCAGGCATCGCCCCC CGCCTCGCCGGCGAGGTGTCGCCGTCGGCGCTCTGCTCCTGCGACGTATCCGTCGCGGCG GCCATCGCCGCGCTCTCGGCTGGCGACCTCACGGCCTTCCTCCACCGCAGCGACCTCCGG TGCCGCCGCAACCTCCCCGGCATGGTCGACCTCCTGTACGCCGGCGACCCTTCGTCGTGG CCCCCCTCCCCCTCCTCCTCTTCCTCCTCCTCGTCGTCATCGTCGTCGTTATCCTCCTTC TCGTCTTCCTCCGACGACGAGGCGGAGGACGGGTACAAACACTATGCGCCAGCGCCGTGC GCGCGGCGAGACAACAACAGGCAGATCATCGCGTGCCACCCGGGGAGCTCGCTGGTGGCG GTGATGGCGCAGGCGGTCGCGCACCGCGTGACGCAGGTGTGGGTGGTGGACTTCGACGAC GGCGAGCTGGTCGGCGTCGTCCGCTTCCTCGACGTGCTCTGGGTTCTTCGCGAACACCTC AACCAACCACCCCCTGATCTACCCATCGAATTTCTCATCAATTAATCCCAGTACTAAGCT TCGTTGATGTACATACGAGGACAAAAATTGCGACCATGAACTGAACCTTTTGTTCATCTT AAATTTACGCCATGTGTTTCGTCGGCGGATGAACTTGAAACGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)