cluster # 4027

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Oryza sativa
cluster # 4027 cluster # 4027 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4027#0 length = 2208 sequences # 2

consensus_4027#1 length = 680 sequences # 1

consensusID : consensus_4027#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2208
fasta sequence

                              [TGTTTCGAAGCCCCCCCCACAACACGGGAACCCCGAATCTCCCCACCTCTCCCCTCCCATTCGACTAGGGTTTTTCTCTAGGGCTTGGGGAACCTCGGCGAGGCGCGTCGGCGATGTCGCTCCGGCCGAGCGAGCGGATGGGGATCCGCCAGAAGGGCTACAAGGCGTCGATGGACGCGGCGGAGGGGCGGCGGCGGCGGGAGGACATCACCGTGATACTCCGCAAGGCCGACCGCGATCGCGCCCTCAAGGAGAAGAGGCGGCGCCCCACGGCCACCGCCGCCGCCGAGGGGTTGCCGCAGGCGGCGCACTCGTCGGCCATCGAGAAGAAGTTGGAGAGCCTGCCGATGATGGTGCAGGGGTTGTACTCGGATGACAGCAGCATGCAGTTGGAGTCGACCACGCAGTTCAGGAAGCTGCTCTCTGTCGACCATTGTCCTCCAATTGATGAGGTGATTAGATCTGGAGTGCTCCCTCGCTTTGTGGAATTCCTCACCAGGGAGGAGTACCCCCAGCTCCAGTTTGAGGCAGCATGGGCTCTCACCAATATTGCTTCAGGAACAGCAGCCAACACAATGGCAGTTATTGAACATGGTGCTGTGCCCATCTTTGTGAAGCTCCTCAGCTCACCAAGAGAGGATGTCCGTGAACAGGCTGTCTGGGCCCTGGGAAATGTGGCTGGGGATTCCACAAAATGCCGTAACCTGGTTCTTATGCATGGTGCAATGTTACCGCTACTGCAGCAGCTCAATGAGCATGCTAAACTCTCGATGCTGAGGAACAGTGCCTGGACCCTTTCTAACTTCTGCCGTGGCAAGCCGCAGCCTGACTTCAAGCATGTTGAACCTGCGCTTCCAGTGCTGCGGGAGCTCATCCTCTCTCAAGATGAGGAGATCCTAACGGACTCATGTTGGGCACTCTCTTACCTGTCAGATGGTTCTAATGACAATATACAAGCTGTGATTGAAACTGGCGTGTGTGATTGGCTTGTTGAGCTCCTTAGCCATCCTTCACCTGTGGTGCTCATTCCTGCTCTCCGCACGGTTGGCAACATTGTAACTGGGGATGATGCGCAGACCCAGTGTATTGTTGGTCATCCCCAAGCACTTCCCTGTCTTTTCAATCTTTTGACAACAACTCAAAAGAAAAGCGTCAAGAGAGAAGCTTGCTGGACAATCTCCAACATCACAGCTGGAACTAAAGAGCAGATTCAGGCTGTGATCGATTCAAACATAATTGCTCCTCTATTGCATCTGTTGCAACATGCTGAGTTTGATGTCAAAAAGGAGGCTGTTTGGGCAATTTCTAATGCCACATCTGGTGGGACATTCAATCAGATAGAGTATCTTGTTAGTCAGGGTTGCATCAAGCCGCTTTGTGATTTACTTGTTCACCAAGATTCCAAAACAGTGTTAACTTGTTTGGAGGCCCTTGATAATATCTTGAGGGTTGGGGAGGCTAAGAAGAACTTGGGGGCTTGTAATATGAACATATTTGTGCCGATGGTTGATGAAGCTGATGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATGTTGAGATATATAATAAGGCAGTTTATGTGCTTGAGTCATACTGGGTGCAGGAGGATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTAAAGGTAAATTTCTATTCACTAATGGTTGGAACTGTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATGCACCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATCGGAGAGTCAAGTTATCCGAGTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGGTTGGTTCATATGGATTATGGTTCTCCACACAAGGGGGTGGGTACTGGAAATTGGTCGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCAGTAGCGTAAGCTGGTATGTCTGTGGAGGTAAAAAAAAAAGGGAAAAGACAAAAATACTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAG]

[+] EMBL AK100070             [TGTTTCGAAGCCCCCCCCACAACACGGGAACCCCGAATCTCCCCACCTCTCCCCTCCCATTCGACTAGGGTTTTTCTCTAGGGCTTGGGGAACCTCGGCGAGGCGCGTCGGCGATGTCGCTCCGGCCGAGCGAGCGGATGGGGATCCGCCAGAAGGGCTACAAGGCGTCGATGGACGCGGCGGAGGGGCGGCGGCGGCGGGAGGACATCACCGTGATACTCCGCAAGGCCGACCGCGATCGCGCCCTCAAGGAGAAGAGGCGGCGCCCCACGGCCACCGCCGCCGCCGAGGGGTTGCCGCAGGCGGCGCACTCGTCGGCCATCGAGAAGAAGTTGGAGAGCCTGCCGATGATGGTGCAGGGGTTGTACTCGGATGACAGCAGCATGCAGTTGGAGTCGACCACGCAGTTCAGGAAGCTGCTCTCTGTCGACCATTGTCCTCCAATTGATGAGGTGATTAGATCTGGAGTGCTCCCTCGCTTTGTGGAATTCCTCACCAGGGAGGAGTACCCCCAGCTCCAGTTTGAGGCAGCATGGGCTCTCACCAATATTGCTTCAGGAACAGCAGCCAACACAATGGCAGTTATTGAACATGGTGCTGTGCCCATCTTTGTGAAGCTCCTCAGCTCACCAAGAGAGGATGTCCGTGAACAGGCTGTCTGGGCCCTGGGAAATGTGGCTGGGGATTCCACAAAATGCCGTAACCTGGTTCTTATGCATGGTGCAATGTTACCGCTACTGCAGCAGCTCAATGAGCATGCTAAACTCTCGATGCTGAGGAACAGTGCCTGGACCCTTTCTAACTTCTGCCGTGGCAAGCCGCAGCCTGACTTCAAGCATGTTGAACCTGCGCTTCCAGTGCTGCGGGAGCTCATCCTCTCTCAAGATGAGGAGATCCTAACGGACTCATGTTGGGCACTCTCTTACCTGTCAGATGGTTCTAATGACAATATACAAGCTGTGATTGAAACTGGCGTGTGTGATTGGCTTGTTGAGCTCCTTAGCCATCCTTCACCTGTGGTGCTCATTCCTGCTCTCCGCACGGTTGGCAACATTGTAACTGGGGATGATGCGCAGACCCAGTGTATTGTTGGTCATCCCCAAGCACTTCCCTGTCTTTTCAATCTTTTGACAACAACTCAAAAGAAAAGCGTCAAGAGAGAAGCTTGCTGGACAATCTCCAACATCACAGCTGGAACTAAAGAGCAGATTCAGGCTGTGATCGATTCAAACATAATTGCTCCTCTATTGCATCTGTTGCAACATGCTGAGTTTGATGTCAAAAAGGAGGCTGTTTGGGCAATTTCTAATGCCACATCTGGTGGGACATTCAATCAGATAGAGTATCTTGTTAGTCAGGGTTGCATCAAGCCGCTTTGTGATTTACTTGTTCACCAAGATTCCAAAACAGTGTTAACTTGTTTGGAGGCCCTTGATAATATCTTGAGGGTTGGGGAGGCTAAGAAGAACTTGGGGGCTTGTAATATGAACATATTTGTGCCGATGGTTGATGAAGCTGATGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATGTTGAGATATATAATAAGGCAGTTTATGTGCTTGAGTCATACTGGGTGCAGGAGGATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTAAAGGTAAATTTCTATTCACTAATGGTTGGAACTGTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATGCACCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATCGGAGAGTCAAGTTATCCGAGTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGGTTGGTTCATATGGATTATGGTTCTCCACACAAGGGGGTGGGTACTGGAAATTGGTCGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCAGTAGCGTAAGCTGGTATGTCTGTGGAGGTAAAAAAAAAAGGGAAAAGACAAAAATACTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCA ]
[+] EMBL AK058467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGCCACATCTGGTGGGACATTCAATCAGATAGAGTATCTTGTTAGTCAGGGTTGCATCAAGCCGCTTTGTGATTTACTTGTTCACCAAGATTCCAAAACAGTGTTAACTTGTTTGGAGGCCCTTGATAATATCTTGAGGGTTGGGGAGGCTAAGAAGAACTTGGGGGCTTGTAATATGAACATATTTGTGCCGATGGTTGATGAAGCTGATGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATGTTGAGATATATAATAAGGCAGTTTATGTGCTTGAGTCATACTGGGTGCAGGAGGATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTAAAGGTAAATTTCTATTCACTAATGGTTGGAACTGTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATGCACCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATCGGAGAGTCAAGTTATCCGAGTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGGTTGGTTCATATGGATTATGGTTCTCCACACAAGGGGGTGGGTACTGGAAATTGGTCGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCAGTAGCGTAAGCTGGTATGTCTGTGGAGGTAAAAAAAAAAGGGAAAAGACAAAAATACTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAG]




>consensus_4027#0
TGTTTCGAAGCCCCCCCCACAACACGGGAACCCCGAATCTCCCCACCTCTCCCCTCCCAT
TCGACTAGGGTTTTTCTCTAGGGCTTGGGGAACCTCGGCGAGGCGCGTCGGCGATGTCGC
TCCGGCCGAGCGAGCGGATGGGGATCCGCCAGAAGGGCTACAAGGCGTCGATGGACGCGG
CGGAGGGGCGGCGGCGGCGGGAGGACATCACCGTGATACTCCGCAAGGCCGACCGCGATC
GCGCCCTCAAGGAGAAGAGGCGGCGCCCCACGGCCACCGCCGCCGCCGAGGGGTTGCCGC
AGGCGGCGCACTCGTCGGCCATCGAGAAGAAGTTGGAGAGCCTGCCGATGATGGTGCAGG
GGTTGTACTCGGATGACAGCAGCATGCAGTTGGAGTCGACCACGCAGTTCAGGAAGCTGC
TCTCTGTCGACCATTGTCCTCCAATTGATGAGGTGATTAGATCTGGAGTGCTCCCTCGCT
TTGTGGAATTCCTCACCAGGGAGGAGTACCCCCAGCTCCAGTTTGAGGCAGCATGGGCTC
TCACCAATATTGCTTCAGGAACAGCAGCCAACACAATGGCAGTTATTGAACATGGTGCTG
TGCCCATCTTTGTGAAGCTCCTCAGCTCACCAAGAGAGGATGTCCGTGAACAGGCTGTCT
GGGCCCTGGGAAATGTGGCTGGGGATTCCACAAAATGCCGTAACCTGGTTCTTATGCATG
GTGCAATGTTACCGCTACTGCAGCAGCTCAATGAGCATGCTAAACTCTCGATGCTGAGGA
ACAGTGCCTGGACCCTTTCTAACTTCTGCCGTGGCAAGCCGCAGCCTGACTTCAAGCATG
TTGAACCTGCGCTTCCAGTGCTGCGGGAGCTCATCCTCTCTCAAGATGAGGAGATCCTAA
CGGACTCATGTTGGGCACTCTCTTACCTGTCAGATGGTTCTAATGACAATATACAAGCTG
TGATTGAAACTGGCGTGTGTGATTGGCTTGTTGAGCTCCTTAGCCATCCTTCACCTGTGG
TGCTCATTCCTGCTCTCCGCACGGTTGGCAACATTGTAACTGGGGATGATGCGCAGACCC
AGTGTATTGTTGGTCATCCCCAAGCACTTCCCTGTCTTTTCAATCTTTTGACAACAACTC
AAAAGAAAAGCGTCAAGAGAGAAGCTTGCTGGACAATCTCCAACATCACAGCTGGAACTA
AAGAGCAGATTCAGGCTGTGATCGATTCAAACATAATTGCTCCTCTATTGCATCTGTTGC
AACATGCTGAGTTTGATGTCAAAAAGGAGGCTGTTTGGGCAATTTCTAATGCCACATCTG
GTGGGACATTCAATCAGATAGAGTATCTTGTTAGTCAGGGTTGCATCAAGCCGCTTTGTG
ATTTACTTGTTCACCAAGATTCCAAAACAGTGTTAACTTGTTTGGAGGCCCTTGATAATA
TCTTGAGGGTTGGGGAGGCTAAGAAGAACTTGGGGGCTTGTAATATGAACATATTTGTGC
CGATGGTTGATGAAGCTGATGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATG
TTGAGATATATAATAAGGCAGTTTATGTGCTTGAGTCATACTGGGTGCAGGAGGATGACC
AACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGT
TTGGCAGTTTCGGTAAAGGTAAATTTCTATTCACTAATGGTTGGAACTGTGAATCTGAAT
CTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATG
CACCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATCGGAGAGTCAAGTTATCCGAGTCAT
GGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGG
TCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGG
TTGGTTCATATGGATTATGGTTCTCCACACAAGGGGGTGGGTACTGGAAATTGGTCGGTC
GGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCA
GTAGCGTAAGCTGGTATGTCTGTGGAGGTAAAAAAAAAAGGGAAAAGACAAAAATACTTG
GAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAG

consensusID : consensus_4027#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence

                              [TTTGTGCCGATGGTTGATGAAGCTGGTGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATGTTGAGATATATAATAAGGCAGTTTATGTGCCTGAGTCATACTGGGTGCAGGAGGATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTAAAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATGCCCCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATTGGAGAGTCAAGTTATCCGAGTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGGTTGGTTCATATGGATTATGGTTCTCCCCCCAAGGGGGTGGGTACTGGAAATTGGTCGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCAGTAGCGTAAGCTGGTATGTCTGTGGAAGTAAAAAAAAAAGGGAAAAGACAAAAATTCTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAGTGGGTTTTGGAAAAAAAAAAAAAAAAA]

[-] EMBL CA762986             [TTTGTGCCGATGGTTGATGAAGCTGGTGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATGTTGAGATATATAATAAGGCAGTTTATGTGCCTGAGTCATACTGGGTGCAGGAGGATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTAAAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATGCCCCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATTGGAGAGTCAAGTTATCCGAGTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGGTTGGTTCATATGGATTATGGTTCTCCCCCCAAGGGGGTGGGTACTGGAAATTGGTCGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCAGTAGCGTAAGCTGGTATGTCTGTGGAAGTAAAAAAAAAAGGGAAAAGACAAAAATTCTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAGTGGGTTTTGGAAAAAAAAAAAAAAAAA]




>consensus_4027#1
TTTGTGCCGATGGTTGATGAAGCTGGTGGCTTGGACAAAATTGAGGATCTCCAGAACCAT
GACAATGTTGAGATATATAATAAGGCAGTTTATGTGCCTGAGTCATACTGGGTGCAGGAG
GATGACCAACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATG
TTTCAGTTTGGCAGTTTCGGTAAAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGG
AAATGCCCCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATTGGAGAGTCAAGTTATCCGA
GTCATGGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAG
CAAGGTCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTAT
AGCGGTTGGTTCATATGGATTATGGTTCTCCCCCCAAGGGGGTGGGTACTGGAAATTGGT
CGGTCGGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCC
TTTCAGTAGCGTAAGCTGGTATGTCTGTGGAAGTAAAAAAAAAAGGGAAAAGACAAAAAT
TCTTGGAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAGTGGGTTT
TGGAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4027#0      TGTTTCGAAGCCCCCCCCACAACACGGGAACCCCGAATCTCCCCACCTCTCCCCTCCCAT 60
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TCGACTAGGGTTTTTCTCTAGGGCTTGGGGAACCTCGGCGAGGCGCGTCGGCGATGTCGC 120
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TCCGGCCGAGCGAGCGGATGGGGATCCGCCAGAAGGGCTACAAGGCGTCGATGGACGCGG 180
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      CGGAGGGGCGGCGGCGGCGGGAGGACATCACCGTGATACTCCGCAAGGCCGACCGCGATC 240
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      GCGCCCTCAAGGAGAAGAGGCGGCGCCCCACGGCCACCGCCGCCGCCGAGGGGTTGCCGC 300
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      AGGCGGCGCACTCGTCGGCCATCGAGAAGAAGTTGGAGAGCCTGCCGATGATGGTGCAGG 360
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      GGTTGTACTCGGATGACAGCAGCATGCAGTTGGAGTCGACCACGCAGTTCAGGAAGCTGC 420
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TCTCTGTCGACCATTGTCCTCCAATTGATGAGGTGATTAGATCTGGAGTGCTCCCTCGCT 480
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TTGTGGAATTCCTCACCAGGGAGGAGTACCCCCAGCTCCAGTTTGAGGCAGCATGGGCTC 540
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TCACCAATATTGCTTCAGGAACAGCAGCCAACACAATGGCAGTTATTGAACATGGTGCTG 600
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TGCCCATCTTTGTGAAGCTCCTCAGCTCACCAAGAGAGGATGTCCGTGAACAGGCTGTCT 660
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      GGGCCCTGGGAAATGTGGCTGGGGATTCCACAAAATGCCGTAACCTGGTTCTTATGCATG 720
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      GTGCAATGTTACCGCTACTGCAGCAGCTCAATGAGCATGCTAAACTCTCGATGCTGAGGA 780
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      ACAGTGCCTGGACCCTTTCTAACTTCTGCCGTGGCAAGCCGCAGCCTGACTTCAAGCATG 840
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TTGAACCTGCGCTTCCAGTGCTGCGGGAGCTCATCCTCTCTCAAGATGAGGAGATCCTAA 900
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      CGGACTCATGTTGGGCACTCTCTTACCTGTCAGATGGTTCTAATGACAATATACAAGCTG 960
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TGATTGAAACTGGCGTGTGTGATTGGCTTGTTGAGCTCCTTAGCCATCCTTCACCTGTGG 1020
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TGCTCATTCCTGCTCTCCGCACGGTTGGCAACATTGTAACTGGGGATGATGCGCAGACCC 1080
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      AGTGTATTGTTGGTCATCCCCAAGCACTTCCCTGTCTTTTCAATCTTTTGACAACAACTC 1140
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      AAAAGAAAAGCGTCAAGAGAGAAGCTTGCTGGACAATCTCCAACATCACAGCTGGAACTA 1200
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      AAGAGCAGATTCAGGCTGTGATCGATTCAAACATAATTGCTCCTCTATTGCATCTGTTGC 1260
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      AACATGCTGAGTTTGATGTCAAAAAGGAGGCTGTTTGGGCAATTTCTAATGCCACATCTG 1320
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      GTGGGACATTCAATCAGATAGAGTATCTTGTTAGTCAGGGTTGCATCAAGCCGCTTTGTG 1380
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      ATTTACTTGTTCACCAAGATTCCAAAACAGTGTTAACTTGTTTGGAGGCCCTTGATAATA 1440
consensus_4027#1      ------------------------------------------------------------
                                                                                  

consensus_4027#0      TCTTGAGGGTTGGGGAGGCTAAGAAGAACTTGGGGGCTTGTAATATGAACATATTTGTGC 1500
consensus_4027#1      -----------------------------------------------------TTTGTGC 7
                                                                           *******

consensus_4027#0      CGATGGTTGATGAAGCTGATGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATG 1560
consensus_4027#1      CGATGGTTGATGAAGCTGGTGGCTTGGACAAAATTGAGGATCTCCAGAACCATGACAATG 67
                      ****************** *****************************************

consensus_4027#0      TTGAGATATATAATAAGGCAGTTTATGTGCTTGAGTCATACTGGGTGCAGGAGGATGACC 1620
consensus_4027#1      TTGAGATATATAATAAGGCAGTTTATGTGCCTGAGTCATACTGGGTGCAGGAGGATGACC 127
                      ****************************** *****************************

consensus_4027#0      AACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGT 1680
consensus_4027#1      AACAGCCCTTTCTTATTCCATCTGTATCTGAATCTGAATCTGACAATGAAATGTTTCAGT 187
                      ************************************************************

consensus_4027#0      TTGGCAGTTTCGGTAAAGGTAAATTTCTATTCACTAATGGTTGGAACTGTGAATCTGAAT 1740
consensus_4027#1      TTGGCAGTTTCGGTAAAG------------------------------------------ 205
                      ******************                                          

consensus_4027#0      CTGACAATGAAATGTTTCAGTTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATG 1800
consensus_4027#1      --------------------TTTGGCAGTTTCGGTGAAGTGCCCGATTTGGATGGAAATG 245
                                          ****************************************

consensus_4027#0      CACCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATCGGAGAGTCAAGTTATCCGAGTCAT 1860
consensus_4027#1      CCCCGTAGCTGTCTGTTCAGGGGGCTTTCCAGAATTGGAGAGTCAAGTTATCCGAGTCAT 305
                      * ********************************* ************************

consensus_4027#0      GGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGG 1920
consensus_4027#1      GGTTTGGTCCTGCTAACTTGTTATGAGGCAGCAGTCAGGGTTCGTCCGATAAGAGCAAGG 365
                      ************************************************************

consensus_4027#0      TCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGG 1980
consensus_4027#1      TCAGGGTATGGCAATTAGGTACATTGCTTTTGTGTGGTTCGGGTGTCTTGTGTATAGCGG 425
                      ************************************************************

consensus_4027#0      TTGGTTCATATGGATTATGGTTCTCCACACAAGGGGGTGGGTACTGGAAATTGGTCGGTC 2040
consensus_4027#1      TTGGTTCATATGGATTATGGTTCTCCCCCCAAGGGGGTGGGTACTGGAAATTGGTCGGTC 485
                      ************************** * *******************************

consensus_4027#0      GGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCA 2100
consensus_4027#1      GGGGAAGGGCATACTCTTGCTTGTGTTGTCGGGTTAGCTATTACTTTTACCTTCCTTTCA 545
                      ************************************************************

consensus_4027#0      GTAGCGTAAGCTGGTATGTCTGTGGAGGTAAAAAAAAAAGGGAAAAGACAAAAATACTTG 2160
consensus_4027#1      GTAGCGTAAGCTGGTATGTCTGTGGAAGTAAAAAAAAAAGGGAAAAGACAAAAATTCTTG 605
                      ************************** **************************** ****

consensus_4027#0      GAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAG------------ 2208
consensus_4027#1      GAAGCTGTAAAGCCATAGTTTACATTGTTGTTAATCATGAGAACCCAGTGGGTTTTGGAA 665
                      ************************************************            

consensus_4027#0      ---------------
consensus_4027#1      AAAAAAAAAAAAAAA 680