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Oryza sativa
cluster # 404 cluster # 404       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_404#0 length = 2569 sequences # 2  

consensusID : consensus_404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2569
fasta sequence
                              [CTCTCAATCGCTCCCTGAGCTAGAGCTGTCCCTGCCAAAGGCAAATAATACCAGATGAACACGGCAGCCTCTCGATCTCGACAACTCGGGGCGGAATAATTCTGGTGTTCTTCTCATCACCGATCGTTTCTGTACATGTAACAAGTTGAGGATCGTGGCGCCTGCATGCATTTGGTGGACGCCACGTCAAGAATAACCGAGGTTACAGGTGTCTCCCCCTGCATGCAGCAGGGGGCATCTGCAGCTTGCGGAACTCGGATGGTTTGAGTTTGAACGAGTTGCAGCATGTCCCCCATGGAGTCCCGTCCTGATGATCTTGTTCCTCCCGCGATGCACAAGCCGGCGATCCAATGCGCCGCCGCCGAGGACGCGAGCCTGCTGCGAAGCCCGACGGTGTCGTCGGAGGAGTTCATACAGTTCAAGAGGAAAGCCACGACGATCTTGGAGGAGTACTTCTCCACGGACGACGTCGCGGCGACGGCGAACGAGCTGAGGGAGCTGCGCGTGCCGTGCTACCACTACTACTTCGTCAAGAAGCTGGTCTCGGTGGCCATGGACCGCCACGACAGGGAGAAGGAGATGGCGGCCGTGCTGCTGTCCTCGCTGTACGGCGACGTCATCGACCGGCCGCAGGTGTACAAGGGGTTCGGCAAGCTCGCCGAGTCCTGCGACGACCTGTCCGTCGACACGCCCGACGCCGTCGACATCCTCGCCGTGTTCGTCGCCCGCGCCATCATCGACGACATACTCCCGCCGGCGTTCCTGGCCAAGCAGCTGACGTGCCTGCCGGAGGGATGCAAGGGCGCCGAGGTTCTTCACAGGGCGGAGAAAAGCTACCTGTCCGTGCCGCACCACGGCGAGATCATCCTGCAGAGGTGGGGCGGGAGCAAGAGCATCACGGTGGAGGAGGCCAAGGCCAAGATCGCTGACATCCTCGAGGAGTACCTCGCCGCCGGCGACATCGGAGAGGCTTGCCGGTGCATCAGGGGCCTCAAGATCTCTTTCTTCCACCACGACATCGTCAAGCGCGCCCTCACCCTCGCCATGGAGCGCGGAGGCGGCGCCGAGGGGCACATCCTGGATCTCCTCAAGTCGGCGTCCGACGAAGGCATCATCAACGAGAGCCAGATCACCAAAGGGTTCAACCGCCTCATCGATTCCGTCGACGATCTGACGCTCGACGTGCCAAACGCGAGGCGCCTCCTGAAATCGATGATCCTGAAGGCCTCGTCGGAGGGATGGCTCTGCGCGTCGTCGCTGAAGCCGCTGGGCCCCGAGCCGAAGAAGGCCGTCGTCGAGGACGACGCTGCGGTGCGGCAGTTCAAGGCGAAGACATTGTCGATCATAAAGGAGTACTTCTTGACAGGGGACATCATCGAGGTGATGAGCAGCCTGGAGGCCGAGAACTACGCGTGTTCCTCCTCCTACAACGCCATCTTCGTCAAGAAGCTGATCACCTCCGCGATGGACCGGAAGAGCCGCGAGAAGGAGATGGCGTCCGTGCTGCTGTCCTCGCTCGGAATGCCGCCGGAGGACGTCGTGTCGGGGTTCCACCTCCTGATCGAGTCCGCCGAGGACGCCGCGCTGGACAACCCCGCCATCGTCGAGGACCTGACCATGTTCTTCGCCAGGTCAGTGGTCGACGAGGTGATCGCGCCATCGAACCTAGAGAAAATGGAGGAGGAGGCCGGCCGCGGCAAGCCAGGGGGATCCTCCACCGGCTTATTGGCGCTCCGGAACGCCCGTGCCCTGCTCGGCGCGAAGCTCTCTGCGGAGCGGATACTGCGTTGCTGGGGCGGCGGCGCCACCGGCAAGGCCGGGTGGGAGCTGGACGACGTGAAGGACAAGATCGGCAGGCTGCTGCAGGAGTACGACTGCGGCGGCGACATCCGGGAGGCGTGCCAGTGCATCAAGGAGCTCGGGATGCCATTCTTCCACCACGAGGTGGTGAAGAAGGCGCTGGTGGCGATCATGGAGAAGCGTGGCAAGGACGAGCGGCTGTGGGGCCTCCTCGCCGAGTGCTACGGCCGCGGCCTCATCACGCCGAACCAGATGACCAAGGGCTTCGAGCGGGTGGCCGGCTGCGTCGACGACCTCGCGCTCGACGTGCCGGACGCCGGCAAGCAGTTATGCTGCTACGTCGAGCGCGCCAAGAAGGGTGGATGGCTGGACGCGTCCTTCCCCAACGGTGTGCGCTCGTGAAGAACACCCGGTTAATTTATATACATGCAGATGCAGCACTGGCATTCCAGGGGATTTCATTTGCAACTTTACACAGCTATATACTACTTTGCATTCCGTTCCATGTATGTATCAGCAAAGGGAATATGACTAGCACAAGAAAGAAAATTGTTGTCA------TAGGATTAGGAAGCTTTGATCTTCCATTTTAGCAGTTGCGCGGCGTTTAGCCCGGAGGATTTGTGCATTGAAGAGTTTGTGTTGTTTTTAATATGATGTGAGAGTTTCTGTTGTTTTTGTTTTGTGAATTGGCTGCTGAGAGAATTACCATGCTACACCTTGTTATCTTATCACATCCTATATATCTATAAAGTTTATCTCCACTAAATGT]

[+] EMBL AK070688             [CTCTCAATCGCTCCCTGAGCTAGAGCTGTCCCTGCCAAAGGCAAATAATACCAGATGAACACGGCAGCCTCTCGATCTCGACAACTCGGGGCGGAATAATTCTGGTGTTCTTCTCATCACCGATCGTTTCTGTACATGTAACAAGTTGAGGATCGTGGCGCCTGCATGCATTTGGTGGACGCCACGTCAAGAATAACCGAGGTTACAGGTGTCTCCCCCTGCATGCAGCAGGGGGCATCTGCAGCTTGCGGAACTCGGATGGTTTGAGTTTGAACGAGTTGCAGCATGTCCCCCATGGAGTCCCGTCCTGATGATCTTGTTCCTCCCGCGATGCACAAGCCGGCGATCCAATGCGCCGCCGCCGAGGACGCGAGCCTGCTGCGAAGCCCGACGGTGTCGTCGGAGGAGTTCATACAGTTCAAGAGGAAAGCCACGACGATCTTGGAGGAGTACTTCTCCACGGACGACGTCGCGGCGACGGCGAACGAGCTGAGGGAGCTGCGCGTGCCGTGCTACCACTACTACTTCGTCAAGAAGCTGGTCTCGGTGGCCATGGACCGCCACGACAGGGAGAAGGAGATGGCGGCCGTGCTGCTGTCCTCGCTGTACGGCGACGTCATCGACCGGCCGCAGGTGTACAAGGGGTTCGGCAAGCTCGCCGAGTCCTGCGACGACCTGTCCGTCGACACGCCCGACGCCGTCGACATCCTCGCCGTGTTCGTCGCCCGCGCCATCATCGACGACATACTCCCGCCGGCGTTCCTGGCCAAGCAGCTGACGTGCCTGCCGGAGGGATGCAAGGGCGCCGAGGTTCTTCACAGGGCGGAGAAAAGCTACCTGTCCGTGCCGCACCACGGCGAGATCATCCTGCAGAGGTGGGGCGGGAGCAAGAGCATCACGGTGGAGGAGGCCAAGGCCAAGATCGCTGACATCCTCGAGGAGTACCTCGCCGCCGGCGACATCGGAGAGGCTTGCCGGTGCATCAGGGGCCTCAAGATCTCTTTCTTCCACCACGACATCGTCAAGCGCGCCCTCACCCTCGCCATGGAGCGCGGAGGCGGCGCCGAGGGGCACATCCTGGATCTCCTCAAGTCGGCGTCCGACGAAGGCATCATCAACGAGAGCCAGATCACCAAAGGGTTCAACCGCCTCATCGATTCCGTCGACGATCTGACGCTCGACGTGCCAAACGCGAGGCGCCTCCTGAAATCGATGATCCTGAAGGCCTCGTCGGAGGGATGGCTCTGCGCGTCGTCGCTGAAGCCGCTGGGCCCCGAGCCGAAGAAGGCCGTCGTCGAGGACGACGCTGCGGTGCGGCAGTTCAAGGCGAAGACATTGTCGATCATAAAGGAGTACTTCTTGACAGGGGACATCATCGAGGTGATGAGCAGCCTGGAGGCCGAGAACTACGCGTGTTCCTCCTCCTACAACGCCATCTTCGTCAAGAAGCTGATCACCTCCGCGATGGACCGGAAGAGCCGCGAGAAGGAGATGGCGTCCGTGCTGCTGTCCTCGCTCGGAATGCCGCCGGAGGACGTCGTGTCGGGGTTCCACCTCCTGATCGAGTCCGCCGAGGACGCCGCGCTGGACAACCCCGCCATCGTCGAGGACCTGACCATGTTCTTCGCCAGGTCAGTGGTCGACGAGGTGATCGCGCCATCGAACCTAGAGAAAATGGAGGAGGAGGCCGGCCGCGGCAAGCCAGGGGGATCCTCCACCGGCTTATTGGCGCTCCGGAACGCCCGTGCCCTGCTCGGCGCGAAGCTCTCTGCGGAGCGGATACTGCGTTGCTGGGGCGGCGGCGCCACCGGCAAGGCCGGGTGGGAGCTGGACGACGTGAAGGACAAGATCGGCAGGCTGCTGCAGGAGTACGACTGCGGCGGCGACATCCGGGAGGCGTGCCAGTGCATCAAGGAGCTCGGGATGCCATTCTTCCACCACGAGGTGGTGAAGAAGGCGCTGGTGGCGATCATGGAGAAGCGTGGCAAGGACGAGCGGCTGTGGGGCCTCCTCGCCGAGTGCTACGGCCGCGGCCTCATCACGCCGAACCAGATGACCAAGGGCTTCGAGCGGGTGGCCGGCTGCGTCGACGACCTCGCGCTCGACGTGCCGGACGCCGGCAAGCAGTTATGCTGCTACGTCGAGCGCGCCAAGAAGGGTGGATGGCTGGACGCGTCCTTCCCCAACGGTGTGCGCTCGTGAAGAACACCCGGTTAATTTATATACATGCAGATGCAGCACTGGCATTCCAGGGGATTTCATTTGCAACTTTACACAGCTATATACTACTTTGCATTCCGTTCCATGTATGTATCAGCAAAGGGAATATGACTAGCACAAGAAAGAAAATTGTTGTCA      TAGGATTAGGAAGCTTTGATCTTCCATTTTAGCAGTTGCGCGGCGTTTAGCCCGGAGGATTTGTGCATTGAAGAGTTTGTGTTGTTTTTAATATGATGTGAGAGTTTCTGTTGTTTTTGTTTTGTGAATTGGCTGCTGAGAGAATTACCATGCTACACCTTGTTATCTTATCACATCCTATATATCTATAAAGTTTATCTCCACTAAATGT]
[+] EMBL AA750869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGCAGATGCAGCACTGGCATTCCAGGGGATTTCATTTGCAACTTTACACAGCTATATACTACTTTGCATTCCGTTCCATGTATGTATCAGCAAAGGGAATATGACTAGCACAAGAAAGAAAATTGTTGTCATAGGATTAGGATTAGGAAGCTTTGATCTTCCATTTTAGCAGTTGCGCGGCGTTTAGCCCGGAGGATTTGGGCAT                                                                                                                                               ]


>consensus_404#0 CTCTCAATCGCTCCCTGAGCTAGAGCTGTCCCTGCCAAAGGCAAATAATACCAGATGAAC ACGGCAGCCTCTCGATCTCGACAACTCGGGGCGGAATAATTCTGGTGTTCTTCTCATCAC CGATCGTTTCTGTACATGTAACAAGTTGAGGATCGTGGCGCCTGCATGCATTTGGTGGAC GCCACGTCAAGAATAACCGAGGTTACAGGTGTCTCCCCCTGCATGCAGCAGGGGGCATCT GCAGCTTGCGGAACTCGGATGGTTTGAGTTTGAACGAGTTGCAGCATGTCCCCCATGGAG TCCCGTCCTGATGATCTTGTTCCTCCCGCGATGCACAAGCCGGCGATCCAATGCGCCGCC GCCGAGGACGCGAGCCTGCTGCGAAGCCCGACGGTGTCGTCGGAGGAGTTCATACAGTTC AAGAGGAAAGCCACGACGATCTTGGAGGAGTACTTCTCCACGGACGACGTCGCGGCGACG GCGAACGAGCTGAGGGAGCTGCGCGTGCCGTGCTACCACTACTACTTCGTCAAGAAGCTG GTCTCGGTGGCCATGGACCGCCACGACAGGGAGAAGGAGATGGCGGCCGTGCTGCTGTCC TCGCTGTACGGCGACGTCATCGACCGGCCGCAGGTGTACAAGGGGTTCGGCAAGCTCGCC GAGTCCTGCGACGACCTGTCCGTCGACACGCCCGACGCCGTCGACATCCTCGCCGTGTTC GTCGCCCGCGCCATCATCGACGACATACTCCCGCCGGCGTTCCTGGCCAAGCAGCTGACG TGCCTGCCGGAGGGATGCAAGGGCGCCGAGGTTCTTCACAGGGCGGAGAAAAGCTACCTG TCCGTGCCGCACCACGGCGAGATCATCCTGCAGAGGTGGGGCGGGAGCAAGAGCATCACG GTGGAGGAGGCCAAGGCCAAGATCGCTGACATCCTCGAGGAGTACCTCGCCGCCGGCGAC ATCGGAGAGGCTTGCCGGTGCATCAGGGGCCTCAAGATCTCTTTCTTCCACCACGACATC GTCAAGCGCGCCCTCACCCTCGCCATGGAGCGCGGAGGCGGCGCCGAGGGGCACATCCTG GATCTCCTCAAGTCGGCGTCCGACGAAGGCATCATCAACGAGAGCCAGATCACCAAAGGG TTCAACCGCCTCATCGATTCCGTCGACGATCTGACGCTCGACGTGCCAAACGCGAGGCGC CTCCTGAAATCGATGATCCTGAAGGCCTCGTCGGAGGGATGGCTCTGCGCGTCGTCGCTG AAGCCGCTGGGCCCCGAGCCGAAGAAGGCCGTCGTCGAGGACGACGCTGCGGTGCGGCAG TTCAAGGCGAAGACATTGTCGATCATAAAGGAGTACTTCTTGACAGGGGACATCATCGAG GTGATGAGCAGCCTGGAGGCCGAGAACTACGCGTGTTCCTCCTCCTACAACGCCATCTTC GTCAAGAAGCTGATCACCTCCGCGATGGACCGGAAGAGCCGCGAGAAGGAGATGGCGTCC GTGCTGCTGTCCTCGCTCGGAATGCCGCCGGAGGACGTCGTGTCGGGGTTCCACCTCCTG ATCGAGTCCGCCGAGGACGCCGCGCTGGACAACCCCGCCATCGTCGAGGACCTGACCATG TTCTTCGCCAGGTCAGTGGTCGACGAGGTGATCGCGCCATCGAACCTAGAGAAAATGGAG GAGGAGGCCGGCCGCGGCAAGCCAGGGGGATCCTCCACCGGCTTATTGGCGCTCCGGAAC GCCCGTGCCCTGCTCGGCGCGAAGCTCTCTGCGGAGCGGATACTGCGTTGCTGGGGCGGC GGCGCCACCGGCAAGGCCGGGTGGGAGCTGGACGACGTGAAGGACAAGATCGGCAGGCTG CTGCAGGAGTACGACTGCGGCGGCGACATCCGGGAGGCGTGCCAGTGCATCAAGGAGCTC GGGATGCCATTCTTCCACCACGAGGTGGTGAAGAAGGCGCTGGTGGCGATCATGGAGAAG CGTGGCAAGGACGAGCGGCTGTGGGGCCTCCTCGCCGAGTGCTACGGCCGCGGCCTCATC ACGCCGAACCAGATGACCAAGGGCTTCGAGCGGGTGGCCGGCTGCGTCGACGACCTCGCG CTCGACGTGCCGGACGCCGGCAAGCAGTTATGCTGCTACGTCGAGCGCGCCAAGAAGGGT GGATGGCTGGACGCGTCCTTCCCCAACGGTGTGCGCTCGTGAAGAACACCCGGTTAATTT ATATACATGCAGATGCAGCACTGGCATTCCAGGGGATTTCATTTGCAACTTTACACAGCT ATATACTACTTTGCATTCCGTTCCATGTATGTATCAGCAAAGGGAATATGACTAGCACAA GAAAGAAAATTGTTGTCATAGGATTAGGAAGCTTTGATCTTCCATTTTAGCAGTTGCGCG GCGTTTAGCCCGGAGGATTTGTGCATTGAAGAGTTTGTGTTGTTTTTAATATGATGTGAG AGTTTCTGTTGTTTTTGTTTTGTGAATTGGCTGCTGAGAGAATTACCATGCTACACCTTG TTATCTTATCACATCCTATATATCTATAAAGTTTATCTCCACTAAATGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)