These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4058#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2601 fasta sequence [AGCTGCTACCTTTGGGAGTTGGGTGGCGCCATGGCAACATCTTCGGTGGCCGCCATGCCGCACGACTCCACGCCATGGAGGGACCCCTCCAGGGCATCCTCCAGGCAGCCCGCCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAGTCGCCGCGCCCGCGCTGCCCCGACCACCAACACCACCACCACCACCACCACCACGATGCTGCTGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGGCGGAAGCAGATACTGGATCGGTGGGCGGCGGCGGCGGCGGCCGCGTCCGCCACGGCGTCCGCCGAGGCCCCCGCGCCGCAGGAGCAGAGGCGGAGGGCGAGGGACGCCGAGCTGTCCGCGCTCGCGTCGGCCACCCGCCCCGTGACCGCCCGCGCCGCCGTGTTCCGGGAGCCGTCCCCAGCGCCGTCGGACGCGTCGTCGGGGGCGGGGGCGGGGTGCGGGGGCGGGGCCGGGTGCGGCGCGGAGCTCCCGCCCGCGGCGCCGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATCGAGGCGGTGGGGCCCGCCACGCCGCGGCCCTGCGACTGGCCTCCGACTCCGACGGCGGCTCGCCGCGGGGCCGCGTGGGGTGCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCCGACGACGAGCTGGACGCCGCCAACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCGCCCGCGCCGATGCGCGCCGGGGTGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCCAGGCCGACGCAGCTGGTAGTCCGCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTCGCCATGATGGCCCATTGCCGGAGGTGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTGTCGCGGTTCTCGCACAAAGGCAGGATCCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAGGGATTTAAAGTTAAGGATGAAGTTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCAAAACATGAGCATGAGGCCTATACCACAAGCAAGTGCATTGCTGGTAACCAACATAAGGGTGGCCAGGTTTTGGCTGAGAAGTCTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGTTTAGGAAATGAACAAAATGATGGGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGTTGCAAAAACATGGTAAAATTATGTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTCGTGAGGTATGACGAGCATAGTACCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTGCATGAACTTTGCACTCCATCCTCAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGCCTGAATGGTTCATGGGAAGAGAGGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAATCACACTCAGAATGAATTTAATGATCGCCCCTGGATAGATTCCCCTAACTCATGGAGATCATTGTGTGTTGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGGTCCATC-ATGAAATATATGAACT-ACGGAAGTTGGTGGAAAGTTGTA-TTGCATCCCA-AGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCTCCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGAGGTTTAGGTCTTAGGAGGAAGAAGAGCTGCCACTCTATAGCTTTAGATGTGGAGTTTGTGAAGCCCTGGTTTTGAGGAGGCTTCTTGAATCACCTTCATTAACAACCAAAAGTATACGAGCTAGCGTTTCTTGAGAAATGTAAATATGTTTTGTGCAAGCGCAATGTGTACTAAGTACTGACAGAAAGGAACAAACGAAATATCTAATCCAAATGCTGATCTTGTTTCTGATCATTTTTCTTGCTTTCCTTTGTTTCCTTTAAGTTCTGTATTGAACATGTTTGTAGCCTTCAGTTCTGATAATGGGCTTGTCTTG] [+] EMBL AK120716 [AGCTGCTACCTTTGGGAGTTGGGTGGCGCCATGGCAACATCTTCGGTGGCCGCCATGCCGCACGACTCCACGCCATGGAGGGACCCCTCCAGGGCATCCTCCAGGCAGCCCGCCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAGTCGCCGCGCCCGCGCTGCCCCGACCACCAACACCACCACCACCACCACCACCACGATGCTGCTGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGGCGGAAGCAGATACTGGATCGGTGGGCGGCGGCGGCGGCGGCCGCGTCCGCCACGGCGTCCGCCGAGGCCCCCGCGCCGCAGGAGCAGAGGCGGAGGGCGAGGGACGCCGAGCTGTCCGCGCTCGCGTCGGCCACCCGCCCCGTGACCGCCCGCGCCGCCGTGTTCCGGGAGCCGTCCCCAGCGCCGTCGGACGCGTCGTCGGGGGCGGGGGCGGGGTGCGGGGGCGGGGCCGGGTGCGGCGCGGAGCTCCCGCCCGCGGCGCCGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATCGAGGCGGTGGGGCCCGCCACGCCGCGGCCCTGCGACTGGCCTCCGACTCCGACGGCGGCTCGCCGCGGGGCCGCGTGGGGTGCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCCGACGACGAGCTGGACGCCGCCAACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCGCCCGCGCCGATGCGCGCCGGGGTGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCCAGGCCGACGCAGCTGGTAGTCCGCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTCGCCATGATGGCCCATTGCCGGAGGTGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTGTCGCGGTTCTCGCACAAAGGCAGGATCCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAGGGATTTAAAGTTAAGGATGAAGTTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCAAAACATGAGCATGAGGCCTATACCACAAGCAAGTGCATTGCTGGTAACCAACATAAGGGTGGCCAGGTTTTGGCTGAGAAGTCTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGTTTAGGAAATGAACAAAATGATGGGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGTTGCAAAAACATGGTAAAATTATGTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTCGTGAGGTATGACGAGCATAGTACCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTGCATGAACTTTGCACTCCATCCTCAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGCCTGAATGGTTCATGGGAAGAGAGGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAATCACACTCAGAATGAATTTAATGATCGCCCCTGGATAGATTCCCCTAACTCATGGAGATCATTGTGTGTTGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGGTCCATC ATGAAATATATGAACT ACGGAAGTTGGTGGAAAGTTGTA TTGCATCCCA AGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCTCCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGAGGTTTAGGTCTTAGGAGGAAGAAGAGCTGCCACTCTATAGCTTTAGATGTGGAGTTTGTGAAGCCCTGGTTTTGAGGAGGCTTCTTGAATCACCTTCATTAACAACCAAAAGTATACGAGCTAGCGTTTCTTGAGAAATGTAAATATGTTTTGTGCAAGCGCAATGTGTACTAAGTACTGACAGAAAGGAACAAACGAAATATCTAATCCAAATGCTGATCTTGTTTCTGATCATTTTTCTTGCTTTCCTTTGTTTCCTTTAAGTTCTGTATTGAACATGTTTGTAGCCTTCAGTTCTGATAATGGGCTTGTCTTG] [+] EMBL CA767469 [ nGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAAT ACACTCAGAATGAATTTAATGATCGCCCCTGGATAGACTCCCCTAACTCATGGAGATCATTGTGTGTCGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGGTCCATC ATGAAATATATGAACT ACGGAAGTTGGTGGAAAGTTGTA TTGCATCCCA AGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAG ] [+] EMBL BI812357 [ GTCCATCAATGAAATATATGAACTCACGGAAGTTGGTGGAAAGTTGTATTTGCATCCCACAGTAAAGATCCAGCACTCCATTAAAGAGGAGATGT CAGT CACTTCGCGAACCAGGGTTGATGCCAAGCCAACCCGACACACCA C AAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGA CCACAGGAGTTGCCCAATCTGCC ATCTCCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGAGGTTTAGGTCTTAGGAGGAAGAAGAGCTGCCACTCTATAGCTTTAGATGTGGAGTTTGTGAAG CCTGGTTTTGAGGAGGCTTCTTGAATCACCTTCATTAACAACC AAAGTATACGAGCTAGCGTTTCTTGAGAAATGTAAATATGTTTTGTGCAAGCGC ATGTGTACTGAGTACTGACAGAAAGGAACCAACGAAATATCTAATCC AATGCTGATCTTGTTTCTGATCAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||