cluster # 4060

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Oryza sativa
cluster # 4060 cluster # 4060 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4060#0 length = 471 sequences # 3

consensusID : consensus_4060#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 471
fasta sequence

                              [AACTACTCAACTGTAAATAAATTTTATTTTTTTATAATTTATAATATTTAATACATAATCATGTGCTAATAATCCATCATGTTTTCTGAGGGTGAACAGTGCTGGTTCGGACTAACCCTAAGCTTGGAGGAGACACTTGCTGGATCAAGACTCAATACTGTCATGTAGACAACAGGTTGAACTGATCTGGTTGGGCTACCGAGACCATATCTAAATTCTCAACCAGTTCTTATGTTCCTAATTGGCTATCATCCTCGCACTTTTGTGTCCAGTGACACAGAAATGGCCATAATGCTGCTCTCCTCCCACGCACAGCTCTCAAGATGCCGCGTGACATTACATGCAAAGAGCGTGAAGAGATCATCCATTATAGACTCCCCAAAATGGCTTGCCAATAGGGTCTCCGTCACCGCTCTTAAAGTTGTGGTGTGGTTGTTATCGATAGCCTCATGAACACTATATGGTCTCCCT]

[+] EMBL CB678390             [AACTACTCAACTGTAAATAAATTTTATTTTTTTATAATTTATAATATTTAATACATAATCATGTGCTAATAATCCATCATGTTTTCTGAGGGTGAACAGTGCTGGTTCGGACTATCCCTAAGCTTGGAGGAGACACTTGCTGGATCAAGACTCATTACTGTCATGTAGACAACAGGTTGAACTGATCTGGTTGGGCTACCGAGACCATATCTAAATTCTCAACCAGTTCTTATGTTCCTAATTGGCTATCATCCTCGCACTTTTGTGTCCAGTGACACAGAAATGGCCATAATGCTGCTCTCCTCCCACGCACAGCTCTCAAGATGCCGCGTGACATTACATGCAAAGAGCGTGAAGAGATCATCCATTATAGACTCCCCAAAATGGCTTGCCAATAGGGTCTCCGTCACCGCTCTTAAAGTTGTGGTGTGGTTGTTATCGATAACCTCATGAACACTATATGGTCTCCCT]
[+] EMBL CB675168             [                                    ATTTATAATATTTAATACATAATCATGTGCTAATAATCCATCATGTTTTCTGAGGGTGAACAGTGCTGGTTCGGACTAACCCTAAGCTTGGAGGAGACACTTGCTGGATCAAAACTCAATACTGTCATGTAGACAACAGGTTGAACTGATCTGGTTGGGCTACCGAAACCATATCTAAATTCTCAACCAGGTCTTATGTTCCTAATTGGCTATCATCCCCCCACTTTTGTGTCCAGTGACACAAAAATGGCCATAATGCTGCTCTCCTCCCACGCACAGCTCTCAAAATGCCGCGTGACATTACATGCAAAGAGCGTGAAAAGATCATCCATTATAAACTCCCCAAAATGGCTTGCCAATAGGGTCTCCGTCACCGCTCTTAAAGTTGTGGGGTGGTTGTTATCGATAGCCTCATGAACACTATATGGTCTCCCT]
[+] EMBL CB675956             [                                                                GCTAATAATCCATCATGTTTTCTGAGGGTGAACAGTGCTGGTTCGGACTAGCCCTAAGCTTGGAGGAGACACTTGCTGGATCAAGACTCAGTACTGTCATGTAGACAACAGGTTGAACTGATCTGGTTGGGCTACCGAGACCATATCTAAATTCTCAACCAGTTCTTATGTTCCTAATTGGCTATCATCCTCGCACTTTTGTGTCCAGTGACACAGAAATGGCCATAATGCTGCTCTCCTCCCACGCACAGCTCTCAAGATGCCGCGTGACATTACATGCAAAGAGCGTGAAGAGATCATCCATTATAGACTCCCCAAAATGGCTTGCCAATAGGGTCTCCGTCACCGCTCTTAAAGTTGTGGTGTGGTTGTTATCGATAGCCTCATGAACACTATATGGTCTCCCT]




>consensus_4060#0
AACTACTCAACTGTAAATAAATTTTATTTTTTTATAATTTATAATATTTAATACATAATC
ATGTGCTAATAATCCATCATGTTTTCTGAGGGTGAACAGTGCTGGTTCGGACTAACCCTA
AGCTTGGAGGAGACACTTGCTGGATCAAGACTCAATACTGTCATGTAGACAACAGGTTGA
ACTGATCTGGTTGGGCTACCGAGACCATATCTAAATTCTCAACCAGTTCTTATGTTCCTA
ATTGGCTATCATCCTCGCACTTTTGTGTCCAGTGACACAGAAATGGCCATAATGCTGCTC
TCCTCCCACGCACAGCTCTCAAGATGCCGCGTGACATTACATGCAAAGAGCGTGAAGAGA
TCATCCATTATAGACTCCCCAAAATGGCTTGCCAATAGGGTCTCCGTCACCGCTCTTAAA
GTTGTGGTGTGGTTGTTATCGATAGCCTCATGAACACTATATGGTCTCCCT

clustalw multiple alignements is not computed in this case