Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 407 cluster # 407       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_407#0 length = 567 sequences # 2  

consensusID : consensus_407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 567
fasta sequence
                              [TGCCTTTCCGTCGCCATCGTCGGCGGCTTGGGTGTATGGTGACGTATGCGCCGGCGAGCTCCGCGTGCCGTATCAACACCACCTTGCAGACTGCTACTGTGAAGAGCGACGTAGTGTGCTCGTCGGAATCGCCGTGGGACCCATCATCGTCCGCGTCCGGGTGGGGGCGCGCGTTGGCATGCGCTCCAGATGTTCGTCGAAATGCCGCGCCGCAAGTCTGCACAGGAGAGACAGGGTTTCCACCCCGCGTGAGGCACTGAGGCGACATGAACGGTCACGGCGCATTCTCAGACCGACGAGGACGATCATGACGGCTTGACGCGCAGCATGTCCTTGGTCACGCACCTACATGTACTAAATTCCCTCCGACCCACCTTCCAGGGTGTTTCGCGGTGATCACCTCAACTCTGCTTTATCCTTCCCTTTGTCTGCTCCATAAACCCACGGGGTGGGGCTTATGGCGTAGTCTTCTTCATTTGTCTTCACGAGTACACTGCTTGCTGCCCACTGAACGCCCAAACTGGTGTTCTGTGGTGAAACCTTGATTTCAGGCAAAAACTTGAAATT]

[+] EMBL CB638751             [TGCCTTTCCGTCGCCATCGTCGGCGGCTTGGGTGTATGGTGACGTATGCGCCGGCGAGCTCCGCGTGCCGTATCAACACCACCTTGCAGACTGCTACTGTGAAGAGCGACGTAGTGTGCTCGTCGGAATCGCCGTGGGACCCATCATCGTCCGCGTCCGGGTGGGGGCGCGCGTTGGCATGCGCTCCAGATGTTCGTCGAAATGCCGCGCCGCAAGTCTGCACAGGAGAGACAGGGTTTCCACCCCGCGTGAGGCACTGAGGCGACATGAACGGTCACGGCGCATTCTCAGACCGACGAGGACGATCATGACGGCTTGACGCGCAGCATGTCCTTGGTCACGCACCTACATGTACTAAATTCCCTCCGACCCACCTTCCAGGGTGTTTCGCGGTGATCACCTCAACTCTGCTTTATCCTTCCCTTTGTCTGCTCCATAAACCCACGGGGTGGGGCTTATGGCGTAGTCTTCTTCATTTGTCTTCACGAGTACACTGCTTGCTGCCCACTGAACGCCCAAACTGGTGTTCTGTGGTGAAACCTTGATTTCAGGCAAAAACTTGAAATT]
[+] EMBL CB638739             [TGCCTTTCCGTCGCCATCGTCGGCGGCTTGGGTGTATGGTGACGTATGCGCCGGCGAGCTCCGCGTGCCGTATCAACACCACCTTGCAGACTGCTACTGTGAAGAGCGACGTAGTGTGCTCGTCGGAATCGCCGTGGGACCCATCATCGTCCGCGTCCGGGTGGGGGCGCGCGTTGGCATGCGCTCCAGATGTTCGTCGAAATGCCGCGCCGCAAGTCTGCACAGGAGAGACAGGGTTTCCACCCCGCGTGAGGCACTGAGGCGACATGAACGGTCACGGCGCATTCTCAGACCGACGAGGACGATCATGACGGCTTGACGCGCAGCATGTCCTTGGTCACGCACCTACATGTACTAAATTCCCTCCGACCCACCTTCCAGGGTGTTTCGCGGTGATCACCTCAACTCTGCTTTATCCTTCCCTTTGTCTGCTCCATAAACCCACGGGGTGGGGCTTATGGCGTAGTCTTCTTCATTTGTCTTCACGAGTACACTGCTTGCTGCCCACTGAACGCCCAAACTGGT                                          ]


>consensus_407#0 TGCCTTTCCGTCGCCATCGTCGGCGGCTTGGGTGTATGGTGACGTATGCGCCGGCGAGCT CCGCGTGCCGTATCAACACCACCTTGCAGACTGCTACTGTGAAGAGCGACGTAGTGTGCT CGTCGGAATCGCCGTGGGACCCATCATCGTCCGCGTCCGGGTGGGGGCGCGCGTTGGCAT GCGCTCCAGATGTTCGTCGAAATGCCGCGCCGCAAGTCTGCACAGGAGAGACAGGGTTTC CACCCCGCGTGAGGCACTGAGGCGACATGAACGGTCACGGCGCATTCTCAGACCGACGAG GACGATCATGACGGCTTGACGCGCAGCATGTCCTTGGTCACGCACCTACATGTACTAAAT TCCCTCCGACCCACCTTCCAGGGTGTTTCGCGGTGATCACCTCAACTCTGCTTTATCCTT CCCTTTGTCTGCTCCATAAACCCACGGGGTGGGGCTTATGGCGTAGTCTTCTTCATTTGT CTTCACGAGTACACTGCTTGCTGCCCACTGAACGCCCAAACTGGTGTTCTGTGGTGAAAC CTTGATTTCAGGCAAAAACTTGAAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)