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Oryza sativa
cluster # 4075 cluster # 4075       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4075#0 length = 2134 sequences # 1  
consensus_4075#1 length = 829 sequences # 1  
consensus_4075#2 length = 763 sequences # 1  

consensusID : consensus_4075#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2134
fasta sequence
                              [GGCCAGGCTCGATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACTACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACGGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGGTATGGAGTGGTGGGGTTCTAAACCTTATTTTGATGTAAAATTATTGCCATTGTATTCATTTCTATCTGTTCCAGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAGTATGTCAATTGTCTTCCTTACCCTTTTATATCTGGTCCTGTTTAGTTGATGAAGTAGTTGGTGGGTTGTACTGCTTATCTTTTAGTTTTTTTTAATACATTATCATATTGGGTAATCTATAGGTGTAGCATTGTTGTAATGAAAAAAAGGGAACTAACTTAGTTCACTGTATGAAGCTTGAAATTAATTGCTTATAACTGTTTGTATACGATTACTTGAAATTTCTTATGGTTCTAGAGCATGTAGCATATGATTCTCACTTCAATGCTGATAGTATAATATGTATGGGCCACATCTTTAGTTCTTTACTCATCTTCTTTTAGACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTTTGTGCTATCTCTTATGCCTTAAGTTTGCACATTTTTTCAGTATGGAGTATGGACTGTGTATATTCTTTTGAATGTTAGTTAATGAATGAAATACCATGGAAAATAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCACATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTTGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATTTCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGACACAAATATCAAATTAAAGGCCATTAGCTCCTCTTAGCAATCTAAC]

[+] EMBL AK102776             [GGCCAGGCTCGATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACTACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACGGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGGTATGGAGTGGTGGGGTTCTAAACCTTATTTTGATGTAAAATTATTGCCATTGTATTCATTTCTATCTGTTCCAGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAGTATGTCAATTGTCTTCCTTACCCTTTTATATCTGGTCCTGTTTAGTTGATGAAGTAGTTGGTGGGTTGTACTGCTTATCTTTTAGTTTTTTTTAATACATTATCATATTGGGTAATCTATAGGTGTAGCATTGTTGTAATGAAAAAAAGGGAACTAACTTAGTTCACTGTATGAAGCTTGAAATTAATTGCTTATAACTGTTTGTATACGATTACTTGAAATTTCTTATGGTTCTAGAGCATGTAGCATATGATTCTCACTTCAATGCTGATAGTATAATATGTATGGGCCACATCTTTAGTTCTTTACTCATCTTCTTTTAGACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTTTGTGCTATCTCTTATGCCTTAAGTTTGCACATTTTTTCAGTATGGAGTATGGACTGTGTATATTCTTTTGAATGTTAGTTAATGAATGAAATACCATGGAAAATAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCACATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTTGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATTTCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGACACAAATATCAAATTAAAGGCCATTAGCTCCTCTTAGCAATCTAAC]


>consensus_4075#0 GGCCAGGCTCGATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGC TGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGC GGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGG CGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGA TGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCC TCACCACTACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCA TATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGA AACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAG CAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACG GTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTG TTATCCCATTGGTATGGAGTGGTGGGGTTCTAAACCTTATTTTGATGTAAAATTATTGCC ATTGTATTCATTTCTATCTGTTCCAGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTC ATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTG CTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGC CCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATG ATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAAGGCATCCTGAGG ACAGCAAGAATGTTTCTCAAGTATGTCAATTGTCTTCCTTACCCTTTTATATCTGGTCCT GTTTAGTTGATGAAGTAGTTGGTGGGTTGTACTGCTTATCTTTTAGTTTTTTTTAATACA TTATCATATTGGGTAATCTATAGGTGTAGCATTGTTGTAATGAAAAAAAGGGAACTAACT TAGTTCACTGTATGAAGCTTGAAATTAATTGCTTATAACTGTTTGTATACGATTACTTGA AATTTCTTATGGTTCTAGAGCATGTAGCATATGATTCTCACTTCAATGCTGATAGTATAA TATGTATGGGCCACATCTTTAGTTCTTTACTCATCTTCTTTTAGACCCTGAAGAAACAGA AAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATG TGGTTGATACGTTAGGTTTGTGCTATCTCTTATGCCTTAAGTTTGCACATTTTTTCAGTA TGGAGTATGGACTGTGTATATTCTTTTGAATGTTAGTTAATGAATGAAATACCATGGAAA ATAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTT TTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATG ACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCT TTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTT GGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATG TCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAA ACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCACATGGAAGTATG GAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTTGCAGGGACAGGT TGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATTTCTCTGTACAGT CTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGACACAAATATCAA ATTAAAGGCCATTAGCTCCTCTTAGCAATCTAAC



consensusID : consensus_4075#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 829
fasta sequence
                              [GCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACTACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACCGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCT]

[+] EMBL CB675948             [GCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGTCGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGCTCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACTACTACCCTCTCATCCTTCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACCGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGAGTACTATTCAAGCTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAAAATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCT]


>consensus_4075#1 GCACGCCGGCGTCGGCGGCGCGCGGCGGCCGGGCGCTGTACGAGCTGTACAGGGCGGCGA GCCGCGCGGCGGCGCCGGCGGCGCTTCTATGGCGGCGGCTACGAGGACTGGAGCACCCGT CGCGTTGGCCCGAGCGGCTGGGCAGGCCGTCGGTGGCGCGGCCTCGTCCGGGCTCGCCGC TCGTGTGGTTCCACGCCGTATCCCTCGGCGAGGGGATGGCCGCGCTCCCGGTCGTACGCC ACTGCGCCCGCCTCCACCCTGGTCTCCCCATCCTCCTCACCACTACTACCCTCTCATCCT TCGAAGTGATGAAAGACTTGCTCCCGGATGGTGTCATATATCAGTTTGCACCCCTTGACT GTCCTGATGCAATAGAAAGTTTCATTGGATACTGGAAACCAAATTTGATACTTCTTATGG AAAGTGAACTCTGGCCAAACCTCATTTTGTCTGCAGCAGAGAAAGGGATTGCAGTGGTTC TTTTAAATGCGCGCATGTCATTGAAGTCTTTCAACCGTTGGTCCTTGCCTCTAGGGTTGC AGTTAGTCTCTTTGATGCTCTCCAAACTATCACTTGTTATCCCATTGAGTACTATTCAAG CTGTTCGTTTTCAATTACTTCATGCACCACCACAGATCATCCATTTTGCTGGCGATTTAA AATACGCTGTTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTC AGCAGCAGTTCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATG AAATCATTCTCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCT



consensusID : consensus_4075#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 763
fasta sequence
                              [AATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCACATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTTGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATTTCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGACACAAATAGCAAATTAAAGGCCATTAGCTCCTCTTAGCAATC]

[-] EMBL CB675949             [AATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGGCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCACATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTTGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATTTCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGACACAAATAGCAAATTAAAGGCCATTAGCTCCTCTTAGCAATC]


>consensus_4075#2 AATTCTCGTCCCAAGGCATCCTGAGGACAGCAAGAATGTTTCTCAAACCCTGAAGAAACA GAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATA TGTGGTTGATACGTTAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTAT TGGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGG TTGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTG GCAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACT AAAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGC GTTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCAC TATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGC ACATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACT TGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAAT TTCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATG ACACAAATAGCAAATTAAAGGCCATTAGCTCCTCTTAGCAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4075#0      GGCCAGGCTCGATGCGGACGGCCCGCACGCCGGCGTCGGCGGCGCGCGGCGGCC-GGGCG 59
consensus_4075#1      ------------------------GCACGCCGGCGTCGGCGGCGCGCGGCGGCC-GGGCG 35
consensus_4075#2      ---------------------------------AATTCTCGTCCCAAGGCATCCTGAGGA 27
                                                         *   ** * *  ***  ** * *  

consensus_4075#0      CTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGC-GCCGGCGGCGCTTCTATGGCG 118
consensus_4075#1      CTGTACGAGCTGTACAGGGCGGCGAGCCGCGCGGCGGC-GCCGGCGGCGCTTCTATGGCG 94
consensus_4075#2      CAGCAAGAATGTTTCT------CAAACCCTGAAGAAACAGAAAGTGAATTTTGTGCTGAG 81
                      * * * **    * *       * * **  *  *   * *   * *    ** *   * *

consensus_4075#0      GCGGCTACGAGGACTGGAGCACCCGT-CGCGTTGGCCCGAGCGGCTGG-GCAGGCCGTCG 176
consensus_4075#1      GCGGCTACGAGGACTGGAGCACCCGT-CGCGTTGGCCCGAGCGGCTGG-GCAGGCCGTCG 152
consensus_4075#2      GTCAACAAGAGAAGTGGTGTCTTCAAACACCAGTATATATGTGGTTGATACGTTAGGTGA 141
                      *     * *** * *** *    *   * *          * ** **   *     **  

consensus_4075#0      GTGGCGCGGCCTCGTCCGGGCT-CGCCGCTCG-TGTGGTTCCACGCCGTATCCCTCGGCG 234
consensus_4075#1      GTGGCGCGGCCTCGTCCGGGCT-CGCCGCTCG-TGTGGTTCCACGCCGTATCCCTCGGCG 210
consensus_4075#2      ATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATTGGGGGTTCTTTTTTGCCCGG 201
                       *   *    ***  * *** * * **  * * ***  **    *   * *    *   *

consensus_4075#0      AGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCA 294
consensus_4075#1      AGGGGATGGCCGCGCTCCCGGTCGTACGCCACTGCGCCCGCCTCCACCCTGGTCTCCCCA 270
consensus_4075#2      CTTAGCTGGACATAATATT--TCTGAGGCTGCTGCAGTTGGTTGCGCTGTTATGACTG-G 258
                          * *** *    *     **  * **  ****    *  * * *  *  *  *    

consensus_4075#0      TCCTCCTCACCACTACTACCCTCTCATCCT--TCGAAGTGATGAAAGACTTGCTCCCGGA 352
consensus_4075#1      TCCTCCTCACCACTACTACCCTCTCATCCT--TCGAAGTGATGAAAGACTTGCTCCCGGA 328
consensus_4075#2      TCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATG-TGGCAAATAAATCCTTTAG 317
                      ****  *       *** *  **  ** **  ***** ** **  * *      *     

consensus_4075#0      TGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGG 412
consensus_4075#1      TGGTGTCATATATCAGTTTGCACCCCTTGACTGTCCTGATGCAATAGAAAGTTTCATTGG 388
consensus_4075#2      CTGTCAAGCAGGTCAAA--GGAGAATATGAACTTTTGGAAGCACTAAAACAACTGCTTGG 375
                        **     *  ***    * *     ***   *   ** *** ** **    *  ****

consensus_4075#0      ATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTT 472
consensus_4075#1      ATACTGGAAACCAAATTTGATACTTCTTATGGAAAGTGAACTCTGGCCAAACCTCATTTT 448
consensus_4075#2      TGATTCTAGAGC---TCTGGAA--GCATGTCAAAGAGCCGCAAAAGATGCGTTTTCCTTT 430
                        * *  * * *   * **  *   * * *  **      *    *       *   ***

consensus_4075#0      GTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTC 532
consensus_4075#1      GTCTGCAGCAGAGAAAGGGATTGCAGTGGTTCTTTTAAATGCGCGCATGTCATTGAAGTC 508
consensus_4075#2      ATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACTATTGGTTCC 490
                       * *      ***      ** *     *   ***      * **      ****    *

consensus_4075#0      TTT-CAACGGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAAC 591
consensus_4075#1      TTT-CAACCGTTGGTCCTTGCCTCTAGGGTTGCAGTTAGTCTCTTTGATGCTCTCCAAAC 567
consensus_4075#2      CAAACAGACACATGCGACAGCTTCTCGAGT---AGTTAGTATG---GAAGGCTTGCACAT 544
                          **       *     ** *** * **   ******* *    ** *   * ** * 

consensus_4075#0      TATCACTTGTTATCCCATTGGTATGGAGTGGTGGGGTTCTAAACCTTATTTTGATGTAAA 651
consensus_4075#1      TATCACTTGTTATCCCATTG---------------------------------------- 587
consensus_4075#2      GGAAGTATGGAAAATCAGGGT--------------------------------------- 565
                             **  *   **  *                                        

consensus_4075#0      ATTATTGCCATTGTATTCATTTCTATCTGTTCCAGAGTACTATTCAAGCTGTT--CGTTT 709
consensus_4075#1      -----------------------------------AGTACTATTCAAGCTGTT--CGTTT 610
consensus_4075#2      -----------------------------------AGTCACATTTAAAACATTGACATCT 590
                                                         ***   *** **    **  * * *

consensus_4075#0      TCAATTACTTCATGCACCACCACAGATCATCCATTT-TGCTGGCGATTTAAAATACGCTG 768
consensus_4075#1      TCAATTACTTCATGCACCACCACAGATCATCCATTT-TGCTGGCGATTTAAAATACGCTG 669
consensus_4075#2      TCTAGTAACTTGCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGG 650
                      ** * **  *              **  **  **   * **    ***   ** *    *

consensus_4075#0      TTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGT 828
consensus_4075#1      TTGGTGACATTGCTGCTGGGGAGAAAGAGGTAGCTGCAATAGAAGATCTTCAGCAGCAGT 729
consensus_4075#2      TCTCACGAATTTCT-CTGTACAGTCTGATGCA--CATAACAAACTTGTACTCCTAGCATG 707
                      *       *** ** ***   **   ** * *     ** * *           ****  

consensus_4075#0      TCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTC 888
consensus_4075#1      TCAGCAATAGGCCCATCTGGATGGCAGCTTCTATCCACAAAGGGGAAGATGAAATCATTC 789
consensus_4075#2      CCGGTGACAGATG-ACACAAATAGCAAATT--------AAAGGCCA---TTAGCTC-CTC 754
                       * *  * **    *     ** ***  **        *****  *   * *  **  **

consensus_4075#0      TCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCTACTTTTAATTCTCGTCCCAA 948
consensus_4075#1      TCCGTGTTCATGATGAGTTAACCAGGGCGTATCCTACTCT-------------------- 829
consensus_4075#2      TTAGCAATC--------------------------------------------------- 763
                      *  *   **                                                   

consensus_4075#0      GGCATCCTGAGGACAGCAAGAATGTTTCTCAAGTATGTCAATTGTCTTCCTTACCCTTTT 1008
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ATATCTGGTCCTGTTTAGTTGATGAAGTAGTTGGTGGGTTGTACTGCTTATCTTTTAGTT 1068
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TTTTTTAATACATTATCATATTGGGTAATCTATAGGTGTAGCATTGTTGTAATGAAAAAA 1128
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      AGGGAACTAACTTAGTTCACTGTATGAAGCTTGAAATTAATTGCTTATAACTGTTTGTAT 1188
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ACGATTACTTGAAATTTCTTATGGTTCTAGAGCATGTAGCATATGATTCTCACTTCAATG 1248
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      CTGATAGTATAATATGTATGGGCCACATCTTTAGTTCTTTACTCATCTTCTTTTAGACCC 1308
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TGAAGAAACAGAAAGTGAATTTTGTGCTGAGGTCAACAAGAGAAGTGGTGTCTTCAAACA 1368
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      CCAGTATATATGTGGTTGATACGTTAGGTTTGTGCTATCTCTTATGCCTTAAGTTTGCAC 1428
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ATTTTTTCAGTATGGAGTATGGACTGTGTATATTCTTTTGAATGTTAGTTAATGAATGAA 1488
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ATACCATGGAAAATAGGTGAATTAAGAATGCTCTACAGGGTTACTCCAATAGCTGTTATT 1548
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      GGGGGTTCTTTTTTGCCCGGCTTAGCTGGACATAATATTTCTGAGGCTGCTGCAGTTGGT 1608
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TGCGCTGTTATGACTGGTCCTAGTGTTGGGCACTTCTATCATATGCTGGTCGAAATGTGG 1668
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      CAAATAAATCCTTTAGCTGTCAAGCAGGTCAAAGGAGAATATGAACTTTTGGAAGCACTA 1728
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      AAACAACTGCTTGGTGATTCTAGAGCTCTGGAAGCATGTCAAAGAGCCGCAAAAGATGCG 1788
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TTTTCCTTTATGTCAGATGGAGTTGTCAATCGTGTATGGAATTTAGTCCACCCGTTCACT 1848
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ATTGGTTCCCAAACAGACACATGCGACAGCTTCTCGAGTAGTTAGTATGGAAGGCTTGCA 1908
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      CATGGAAGTATGGAAAATCAGGGTAGTCACATTTAAAACATTGACATCTTCTAGTAACTT 1968
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      GCAGGGACAGGTTGACAATGTATGAGTCCTCTTTATTAGGAAGATAAGGTCTCACGAATT 2028
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TCTCTGTACAGTCTGATGCACATAACAAACTTGTACTCCTAGCATGCCGGTGACAGATGA 2088
consensus_4075#1      ------------------------------------------------------------
consensus_4075#2      ------------------------------------------------------------
                                                                                  

consensus_4075#0      CACAAATATCAAATTAAAGGCCATTAGCTCCTCTTAGCAATCTAAC 2134
consensus_4075#1      ----------------------------------------------
consensus_4075#2      ----------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)