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Oryza sativa
cluster # 4086 cluster # 4086       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4086#0 length = 1834 sequences # 1  
consensus_4086#1 length = 1680 sequences # 2  

consensusID : consensus_4086#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1834
fasta sequence
                              [ACCAACTTTATCCTCGCCCCCTCCACACCACCCCTCTCTCCCCTCCCCTCTCAAACACCACCGCCACCGCCATGGTCACGCCCTTCCCCTCCTCCTAGCACCACCTCTCCCCTTCCCGCGCTACGCGGGACGAGGACCAGGGATGGCTCCCCCCACCGCCGTCTCCGCCTCCACCGCCGGCCTGATCTGGTCCTTGTCGCCCTCGCTCTCGCTCGTCGTCACCACCTCGGTGGCGCTTCTGCTCGTGCTCGGCGGTGTGTCCGGGATCCGCGTCAACGTCATCCGGCTCCCGTCGGCGTCGCCGTTCCCGGCGTTCCGGGAGGCGCCGGCGTTCAGGAATGGCGACGGGTGCCCGCCGGCGAGGGGGTCGGCGGCGGCGGAGGGGGGGCGGGTGGACGTGGCCATGACGCTCGACGCCAACTACCTGAGGGGCACCATGGCCGCCGTGTTCTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCGTCGCGTTCCACTTCCTCGCCGCGCGCTCCGACCCGGACGCCGGCGACCTCGCCGCCGCCATCCGCGCCACCTTCCCCTACCTCGGCGCCGCCGTCAGCGTCTACCGCTTCGACCCGTCGCGCGTCCGCGGCCGCATCTCCCGCTCGGTGCGCCGCGCGCTCGACCAGCCGCTCAACTACGCGCGCGTCTACCTCGCCGACACGCTCCCCGCCGGCGTGCGCCGCGTCCTCTACCTCGACTCCGACGTCGTCGTCGTCGACGACGTGCGGAAGCTCTGGTCGGTGGACCTCGCCGGGCACGTGGTGGCGGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGACGCGTTCTGGTCGGACGGCGAGCTCAGCGGCGCCGCGTTCCGACGCGGCCGCCGCCGGCCGCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACATGGGGCGGTGGCGTGACGGCGGGTACACGCGGCGGGTGGAGGAGTGGATGGCGGTGCAGAAGCGGAGGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGACATCAAGGCGGTGGATCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGCGGAGGGGAAATGCCGGAGCCTGCACCCGGGCCCGGTCAGCCTCCTCCATTGGAGTGGCAAGGGGAAGCCATGGCTGCGCCTCGACTCGCGGAAGCCCTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTACAAGGCCGCCGTACCCGCGCTCGAGGAGTGAGCTAGCTAGCTAGCTCGCCGCCGGCGAGCCGAGGCGGCGGCGTGATTGCATTGCATGCATTCGAGGGCAGACATACGAGAGAAGAGGAGAGAGGGAGAGGGAGAGGAGGTGTGTACACGTACGTACGCACGTGCGTGCGTGCATGCATGCATGCATGTGTCCATACGTGCAAAACACAAAAGGGGCAAAAAAAAAAAAAAGTTGTGACGTCATGCAAAACGGCACAAATAAGATTAATTAGGACTGGAAGTGGTGAAGAAATACATGCCAAGAGGATCAATGGAAGGAAGGCGCTCCGTCTCGTAGAAAAACTAATCCTAATTACGAATCTAAATACATATGTATCTAGGTTTATAACTAGGATTGACTTTTTTTTACAGAGTAGTACATATGTGGATGCATGTGCCGATCTCTTTTTCTTTCTTCCTCTTGTTTTGGGTTCCTTGAAAAATTTTCTACCGTTGAATTTGATTCATCATGGTGACGATGATGTACATAGGTGTTTTGATTGGAGTACGATGTGTAAAAAATTAGGGTGGTGAGATCAGAAGTGGGTGG]

[+] EMBL AK071716             [ACCAACTTTATCCTCGCCCCCTCCACACCACCCCTCTCTCCCCTCCCCTCTCAAACACCACCGCCACCGCCATGGTCACGCCCTTCCCCTCCTCCTAGCACCACCTCTCCCCTTCCCGCGCTACGCGGGACGAGGACCAGGGATGGCTCCCCCCACCGCCGTCTCCGCCTCCACCGCCGGCCTGATCTGGTCCTTGTCGCCCTCGCTCTCGCTCGTCGTCACCACCTCGGTGGCGCTTCTGCTCGTGCTCGGCGGTGTGTCCGGGATCCGCGTCAACGTCATCCGGCTCCCGTCGGCGTCGCCGTTCCCGGCGTTCCGGGAGGCGCCGGCGTTCAGGAATGGCGACGGGTGCCCGCCGGCGAGGGGGTCGGCGGCGGCGGAGGGGGGGCGGGTGGACGTGGCCATGACGCTCGACGCCAACTACCTGAGGGGCACCATGGCCGCCGTGTTCTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCGTCGCGTTCCACTTCCTCGCCGCGCGCTCCGACCCGGACGCCGGCGACCTCGCCGCCGCCATCCGCGCCACCTTCCCCTACCTCGGCGCCGCCGTCAGCGTCTACCGCTTCGACCCGTCGCGCGTCCGCGGCCGCATCTCCCGCTCGGTGCGCCGCGCGCTCGACCAGCCGCTCAACTACGCGCGCGTCTACCTCGCCGACACGCTCCCCGCCGGCGTGCGCCGCGTCCTCTACCTCGACTCCGACGTCGTCGTCGTCGACGACGTGCGGAAGCTCTGGTCGGTGGACCTCGCCGGGCACGTGGTGGCGGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGACGCGTTCTGGTCGGACGGCGAGCTCAGCGGCGCCGCGTTCCGACGCGGCCGCCGCCGGCCGCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACATGGGGCGGTGGCGTGACGGCGGGTACACGCGGCGGGTGGAGGAGTGGATGGCGGTGCAGAAGCGGAGGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGACATCAAGGCGGTGGATCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGCGGAGGGGAAATGCCGGAGCCTGCACCCGGGCCCGGTCAGCCTCCTCCATTGGAGTGGCAAGGGGAAGCCATGGCTGCGCCTCGACTCGCGGAAGCCCTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTACAAGGCCGCCGTACCCGCGCTCGAGGAGTGAGCTAGCTAGCTAGCTCGCCGCCGGCGAGCCGAGGCGGCGGCGTGATTGCATTGCATGCATTCGAGGGCAGACATACGAGAGAAGAGGAGAGAGGGAGAGGGAGAGGAGGTGTGTACACGTACGTACGCACGTGCGTGCGTGCATGCATGCATGCATGTGTCCATACGTGCAAAACACAAAAGGGGCAAAAAAAAAAAAAAGTTGTGACGTCATGCAAAACGGCACAAATAAGATTAATTAGGACTGGAAGTGGTGAAGAAATACATGCCAAGAGGATCAATGGAAGGAAGGCGCTCCGTCTCGTAGAAAAACTAATCCTAATTACGAATCTAAATACATATGTATCTAGGTTTATAACTAGGATTGACTTTTTTTTACAGAGTAGTACATATGTGGATGCATGTGCCGATCTCTTTTTCTTTCTTCCTCTTGTTTTGGGTTCCTTGAAAAATTTTCTACCGTTGAATTTGATTCATCATGGTGACGATGATGTACATAGGTGTTTTGATTGGAGTACGATGTGTAAAAAATTAGGGTGGTGAGATCAGAAGTGGGTGG]


>consensus_4086#0 ACCAACTTTATCCTCGCCCCCTCCACACCACCCCTCTCTCCCCTCCCCTCTCAAACACCA CCGCCACCGCCATGGTCACGCCCTTCCCCTCCTCCTAGCACCACCTCTCCCCTTCCCGCG CTACGCGGGACGAGGACCAGGGATGGCTCCCCCCACCGCCGTCTCCGCCTCCACCGCCGG CCTGATCTGGTCCTTGTCGCCCTCGCTCTCGCTCGTCGTCACCACCTCGGTGGCGCTTCT GCTCGTGCTCGGCGGTGTGTCCGGGATCCGCGTCAACGTCATCCGGCTCCCGTCGGCGTC GCCGTTCCCGGCGTTCCGGGAGGCGCCGGCGTTCAGGAATGGCGACGGGTGCCCGCCGGC GAGGGGGTCGGCGGCGGCGGAGGGGGGGCGGGTGGACGTGGCCATGACGCTCGACGCCAA CTACCTGAGGGGCACCATGGCCGCCGTGTTCTCCATCCTGCAGCACACGGCGTGCCCGGA GAGCGTCGCGTTCCACTTCCTCGCCGCGCGCTCCGACCCGGACGCCGGCGACCTCGCCGC CGCCATCCGCGCCACCTTCCCCTACCTCGGCGCCGCCGTCAGCGTCTACCGCTTCGACCC GTCGCGCGTCCGCGGCCGCATCTCCCGCTCGGTGCGCCGCGCGCTCGACCAGCCGCTCAA CTACGCGCGCGTCTACCTCGCCGACACGCTCCCCGCCGGCGTGCGCCGCGTCCTCTACCT CGACTCCGACGTCGTCGTCGTCGACGACGTGCGGAAGCTCTGGTCGGTGGACCTCGCCGG GCACGTGGTGGCGGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGACGC GTTCTGGTCGGACGGCGAGCTCAGCGGCGCCGCGTTCCGACGCGGCCGCCGCCGGCCGCC GTGCTACTTCAACACCGGCGTGATGGTGATGGACATGGGGCGGTGGCGTGACGGCGGGTA CACGCGGCGGGTGGAGGAGTGGATGGCGGTGCAGAAGCGGAGGCGGATCTACCACCTCGG CTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGACATCAAGGCGGTGGATCACCGGTG GAACCAGCACGGGCTCGGCGGCGACAACGCGGAGGGGAAATGCCGGAGCCTGCACCCGGG CCCGGTCAGCCTCCTCCATTGGAGTGGCAAGGGGAAGCCATGGCTGCGCCTCGACTCGCG GAAGCCCTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTACAAGGCCGCCGTACC CGCGCTCGAGGAGTGAGCTAGCTAGCTAGCTCGCCGCCGGCGAGCCGAGGCGGCGGCGTG ATTGCATTGCATGCATTCGAGGGCAGACATACGAGAGAAGAGGAGAGAGGGAGAGGGAGA GGAGGTGTGTACACGTACGTACGCACGTGCGTGCGTGCATGCATGCATGCATGTGTCCAT ACGTGCAAAACACAAAAGGGGCAAAAAAAAAAAAAAGTTGTGACGTCATGCAAAACGGCA CAAATAAGATTAATTAGGACTGGAAGTGGTGAAGAAATACATGCCAAGAGGATCAATGGA AGGAAGGCGCTCCGTCTCGTAGAAAAACTAATCCTAATTACGAATCTAAATACATATGTA TCTAGGTTTATAACTAGGATTGACTTTTTTTTACAGAGTAGTACATATGTGGATGCATGT GCCGATCTCTTTTTCTTTCTTCCTCTTGTTTTGGGTTCCTTGAAAAATTTTCTACCGTTG AATTTGATTCATCATGGTGACGATGATGTACATAGGTGTTTTGATTGGAGTACGATGTGT AAAAAATTAGGGTGGTGAGATCAGAAGTGGGTGG



consensusID : consensus_4086#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1680
fasta sequence
                              [CTTTCCCCACCATCTCCAATGGTGGCCCCCCTCGTCGCCTAGAGCACCGACCCCAACGTTGCCCAAGGACCAGGGTGGCCACCTCTCCTCCTCCCCCCGCCGCGGTCCCCCCTCGCCGCCGGCTCGCCGGCGACGAAGACGTCGTCGTGCCCCCACCACCACCACCACCACTCGGCCACCCACCGGTCCTTGTCCAATTCGCTCTCTCCACCCCCGCCCGCCGCGCGGTCGTCGTAGCAACGGCCGCGGGCACCGCCACCATGGCGCGCTGCGGGAGCGCCATCGCCGCCGTCGCGGCGCTGCTCGTCCTGCTCGGCGGGCACGCGGCCGCGCGCATCCGGGTGGAGCACTCCGGGATGGTGATCCGGCGGCCGTCGTCGTCCATCCCGAGCTTCCGGGAGGCCCCCGCGTTCCGCAACGGCGAGGAGTGCGGCGGCGGGGGGAGGGTGGACGTGGCCATGACGCTGGACGCCAACTACCTCCGGGGCACCATGGCCGGCGTGCTGTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCGTGTCGTTCCACTTCCTCGCGGCCGGGATGGACGCCGACCTCGCGGCGGCGGTGCGCGCCACGTTCCCGTACCTGGACCTCCGCGTGTACCGCTTCGACCCGTCCCGCGTCCGCGGCCGCATCTCCCGCTCCATCCGCCACGCGCTCGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTCCCGCCCGACGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCGTCGACGACATCCGCGCGCTGGCGTCCGTCGACCTCGGCGGCCACGTCGTCGGCGCGCCCGAGTACTGCCACGCCAACTTCACCAACTACTTCACCGACGCGTTCTGGTCGGACCCGGCGCTCAACGGCACGTTCGCCGGCCGCCGCCCGTGCTACTTCAACACCGGCGTCATGGTCATGGACGTCGGCAAGTGGCGCGCCGGCGGCTACACCCGCCGCGTCGAGCGGTGGATGGAGGTGCAGAAGCAGACGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTCCTCGTTCTCGCCGGTGACATCCAGGCCGTCGACCACCGCTGGAACCAGCACGGCCTCGGCGGCGACAACGTCAAGGGGCGGTGCCGTGGCCTCCACCCGGGGCCCATCAGCCTCCTCCATTGGAGCGGCAAGGGGAAGCCATGGATCCGGCTCGACGCGCGGCGCCCGTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTTCCGGCCATCGTCGCCGGTGCTCGAGGAGTGAGCAGCAGCAGCATCGAGCCATGCACAAGCTAAACTGATCAATCTCCTACTTTGTTCTTGCAGAAGCTT-AAAGATTTTTTTTAAAAAAAAAGAAAGAAGTTGGCAAGAACATGATGAAGAAATTGATTTTTCTTCAAAGGAAAAGGAGAAGAAATTAATGTGCAATCAGCAATGGGTGCTATGATCTGTGCTGCTAGCTGCTGTTTTGGGGGGTCTCGATTGGGAAATTAAGCAAAAATCGATGAGGATATGAACGTGCGAATTGCTTCATGATCTCTTTGGTTTATCTTGTATAGGACACAATGTTGTAATTAATTTTGTGAGGATTAGTGTGAATACTGGGAGCTAGGTGGGGGAAGGAACCGACTTACTCTGAC]

[+] EMBL AK100121             [CTTTCCCCACCATCTCCAATGGTGGCCCCCCTCGTCGCCTAGAGCACCGACCCCAACGTTGCCCAAGGACCAGGGTGGCCACCTCTCCTCCTCCCCCCGCCGCGGTCCCCCCTCGCCGCCGGCTCGCCGGCGACGAAGACGTCGTCGTGCCCCCACCACCACCACCACCACTCGGCCACCCACCGGTCCTTGTCCAATTCGCTCTCTCCACCCCCGCCCGCCGCGCGGTCGTCGTAGCAACGGCCGCGGGCACCGCCACCATGGCGCGCTGCGGGAGCGCCATCGCCGCCGTCGCGGCGCTGCTCGTCCTGCTCGGCGGGCACGCGGCCGCGCGCATCCGGGTGGAGCACTCCGGGATGGTGATCCGGCGGCCGTCGTCGTCCATCCCGAGCTTCCGGGAGGCCCCCGCGTTCCGCAACGGCGAGGAGTGCGGCGGCGGGGGGAGGGTGGACGTGGCCATGACGCTGGACGCCAACTACCTCCGGGGCACCATGGCCGGCGTGCTGTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCGTGTCGTTCCACTTCCTCGCGGCCGGGATGGACGCCGACCTCGCGGCGGCGGTGCGCGCCACGTTCCCGTACCTGGACCTCCGCGTGTACCGCTTCGACCCGTCCCGCGTCCGCGGCCGCATCTCCCGCTCCATCCGCCACGCGCTCGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTCCCGCCCGACGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCGTCGACGACATCCGCGCGCTGGCGTCCGTCGACCTCGGCGGCCACGTCGTCGGCGCGCCCGAGTACTGCCACGCCAACTTCACCAACTACTTCACCGACGCGTTCTGGTCGGACCCGGCGCTCAACGGCACGTTCGCCGGCCGCCGCCCGTGCTACTTCAACACCGGCGTCATGGTCATGGACGTCGGCAAGTGGCGCGCCGGCGGCTACACCCGCCGCGTCGAGCGGTGGATGGAGGTGCAGAAGCAGACGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTCCTCGTTCTCGCCGGTGACATCCAGGCCGTCGACCACCGCTGGAACCAGCACGGCCTCGGCGGCGACAACGTCAAGGGGCGGTGCCGTGGCCTCCACCCGGGGCCCATCAGCCTCCTCCATTGGAGCGGCAAGGGGAAGCCATGGATCCGGCTCGACGCGCGGCGCCCGTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTTCCGGCCATCGTCGCCGGTGCTCGAGGAGTGAGCAGCAGCAGCATCGAGCCATGCACAAGCTAAACTGATCAATCTCCTACTTTGTTCTTGCAGAAGCTT AAAGATTTTTTTTAAAAAAAAAGAAAGAAGTTGGCAAGAACATGATGAAGAAATTGATTTTTCTTCAAAGGAAAAGGAGAAGAAA                                                                                                                                                                                                                               ]
[+] EMBL AK072250             [   TCCCCACCATCTCCAATGGTGGCCCCCCTCGTCGCCTAGAGCACCGACCCCAACGTTGCCCAAGGACCAGGGTGGCCACCTCTCCTCCTCCCCCCGCCGCGGTCCCCCCTCGCCGCCGGCTCGCCGGCGACGAAGACGTCGTCGTGCCCCCACCACCACCACCACCACTCGGCCACCCACCGGTCCTTGTCCAATTCGCTCTCTCCACCCCCGCCCGCCGCGCGGTCGTCGTAGCAACGGCCGCGGGCACCGCCACCATGGCGCGCTGCGGGAGCGCCATCGCCGCCGTCGCGGCGCTGCTCGTCCTGCTCGGCGGGCACGCGGCCGCGCGCATCCGGGTGGAGCACTCCGGGATGGTGATCCGGCGGCCGTCGTCGTCCATCCCGAGCTTCCGGGAGGCCCCCGCGTTCCGCAACGGCGAGGAGTGCGGCGGCGGGGGGAGGGTGGACGTGGCCATGACGCTGGACGCCAACTACCTCCGGGGCACCATGGCCGGCGTGCTGTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCGTGTCGTTCCACTTCCTCGCGGCCGGGATGGACGCCGACCTCGCGGCGGCGGTGCGCGCCACGTTCCCGTACCTGGACCTCCGCGTGTACCGCTTCGACCCGTCCCGCGTCCGCGGCCGCATCTCCCGCTCCATCCGCCACGCGCTCGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTCCCGCCCGACGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCGTCGACGACATCCGCGCGCTGGCGTCCGTCGACCTCGGCGGCCACGTCGTCGGCGCGCCCGAGTACTGCCACGCCAACTTCACCAACTACTTCACCGACGCGTTCTGGTCGGACCCGGCGCTCAACGGCACGTTCGCCGGCCGCCGCCCGTGCTACTTCAACACCGGCGTCATGGTCATGGACGTCGGCAAGTGGCGCGCCGGCGGCTACACCCGCCGCGTCGAGCGGTGGATGGAGGTGCAGAAGCAGACGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTCCTCGTTCTCGCCGGTGACATCCAGGCCGTCGACCACCGCTGGAACCAGCACGGCCTCGGCGGCGACAACGTCAAGGGGCGGTGCCGTGGCCTCCACCCGGGGCCCATCAGCCTCCTCCATTGGAGCGGCAAGGGGAAGCCATGGATCCGGCTCGACGCGCGGCGCCCGTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTTCCGGCCATCGTCGCCGGTGCTCGAGGAGTGAGCAGCAGCAGCATCGAGCCATGCACAAGCTAAACTGATCAATCTCCTACTTTGTTCTTGCAGAAGCTTAAAAGATTTTTTTTAAAAAAAAAGAAAGAAGTTGGCAAGAACATGATGAAGAAATTGATTTTTCTTCAAAGGAAAAGGAGAAGAAATTAATGTGCAATCAGCAATGGGTGCTATGATCTGTGCTGCTAGCTGCTGTTTTGGGGGGTCTCGATTGGGAAATTAAGCAAAAATCGATGAGGATATGAACGTGCGAATTGCTTCATGATCTCTTTGGTTTATCTTGTATAGGACACAATGTTGTAATTAATTTTGTGAGGATTAGTGTGAATACTGGGAGCTAGGTGGGGGAAGGAACCGACTTACTCTGAC]


>consensus_4086#1 CTTTCCCCACCATCTCCAATGGTGGCCCCCCTCGTCGCCTAGAGCACCGACCCCAACGTT GCCCAAGGACCAGGGTGGCCACCTCTCCTCCTCCCCCCGCCGCGGTCCCCCCTCGCCGCC GGCTCGCCGGCGACGAAGACGTCGTCGTGCCCCCACCACCACCACCACCACTCGGCCACC CACCGGTCCTTGTCCAATTCGCTCTCTCCACCCCCGCCCGCCGCGCGGTCGTCGTAGCAA CGGCCGCGGGCACCGCCACCATGGCGCGCTGCGGGAGCGCCATCGCCGCCGTCGCGGCGC TGCTCGTCCTGCTCGGCGGGCACGCGGCCGCGCGCATCCGGGTGGAGCACTCCGGGATGG TGATCCGGCGGCCGTCGTCGTCCATCCCGAGCTTCCGGGAGGCCCCCGCGTTCCGCAACG GCGAGGAGTGCGGCGGCGGGGGGAGGGTGGACGTGGCCATGACGCTGGACGCCAACTACC TCCGGGGCACCATGGCCGGCGTGCTGTCCATCCTGCAGCACACGGCGTGCCCGGAGAGCG TGTCGTTCCACTTCCTCGCGGCCGGGATGGACGCCGACCTCGCGGCGGCGGTGCGCGCCA CGTTCCCGTACCTGGACCTCCGCGTGTACCGCTTCGACCCGTCCCGCGTCCGCGGCCGCA TCTCCCGCTCCATCCGCCACGCGCTCGACCAGCCGCTCAACTACGCGCGCATCTACCTCG CCGACACGCTCCCGCCCGACGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCG TCGACGACATCCGCGCGCTGGCGTCCGTCGACCTCGGCGGCCACGTCGTCGGCGCGCCCG AGTACTGCCACGCCAACTTCACCAACTACTTCACCGACGCGTTCTGGTCGGACCCGGCGC TCAACGGCACGTTCGCCGGCCGCCGCCCGTGCTACTTCAACACCGGCGTCATGGTCATGG ACGTCGGCAAGTGGCGCGCCGGCGGCTACACCCGCCGCGTCGAGCGGTGGATGGAGGTGC AGAAGCAGACGCGGATCTACCACCTCGGCTCGCTGCCGCCGTTCCTCCTCGTTCTCGCCG GTGACATCCAGGCCGTCGACCACCGCTGGAACCAGCACGGCCTCGGCGGCGACAACGTCA AGGGGCGGTGCCGTGGCCTCCACCCGGGGCCCATCAGCCTCCTCCATTGGAGCGGCAAGG GGAAGCCATGGATCCGGCTCGACGCGCGGCGCCCGTGCGCCGTCGACTACCTCTGGGCGC CGTACGACCTCTTCCGGCCATCGTCGCCGGTGCTCGAGGAGTGAGCAGCAGCAGCATCGA GCCATGCACAAGCTAAACTGATCAATCTCCTACTTTGTTCTTGCAGAAGCTTAAAGATTT TTTTTAAAAAAAAAGAAAGAAGTTGGCAAGAACATGATGAAGAAATTGATTTTTCTTCAA AGGAAAAGGAGAAGAAATTAATGTGCAATCAGCAATGGGTGCTATGATCTGTGCTGCTAG CTGCTGTTTTGGGGGGTCTCGATTGGGAAATTAAGCAAAAATCGATGAGGATATGAACGT GCGAATTGCTTCATGATCTCTTTGGTTTATCTTGTATAGGACACAATGTTGTAATTAATT TTGTGAGGATTAGTGTGAATACTGGGAGCTAGGTGGGGGAAGGAACCGACTTACTCTGAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4086#0      ---------------------------------------------------ACCAACTTT 9
consensus_4086#1      CTTTCCCCACCATCTCCAATGGTGGCCCCCCTCGTCGCCTAGAGCACCGACCCCAACGTT 60
                                                                          ***** **

consensus_4086#0      ATCCTCGCCCCCTCCACACCACCCCTCTCTCCCCTCCCCTCTCAAACACCAC-CGCCACC 68
consensus_4086#1      GCCCAAGGACCAGGGTGGCCACCTCTCCTCCTCCCCCCGCCGCGGTCCCCCCTCGCCGCC 120
                        **  *  **       ***** ***   * ** ***  * *   * ** * **** **

consensus_4086#0      GCC------ATGGTCACGCCCTTCCCCTCCTCCTAGCACCACCTCTCCCCTTCCCGCGCT 122
consensus_4086#1      GGCTCGCCGGCGACGAAGACGTCGTCGTGCCCCCACCACCACCACCACCACTCGGCCACC 180
                      * *        *   * * * *   * * * ** * ******* *  **  **   * * 

consensus_4086#0      ACGCGGGACGAGGACCAGGGATGGCTCCCCCCACCGCCGTCTCCGCCTCCACCGCCG--- 179
consensus_4086#1      -CACCGGTCCTTGTCCAA--TTCGCTCTCTCCACCCCCGCCCGCCGCGCGGTCGTCGTAG 237
                       * * ** *   * ***    * **** * ***** *** *  *  * *   ** **   

consensus_4086#0      -GCCTGATCTGGTCCTTGTCGCCCTCGCTCTC-----GCTCGTCGTCACCACCTCGGTGG 233
consensus_4086#1      CAACGGCCGCGGGCACCGCCACCATGGCGCGCTGCGGGAGCGCCATCGCCGCCGTCGCGG 297
                         * *    ** *   * * ** * ** * *     *  ** * ** ** **   * **

consensus_4086#0      CGCTTCTGCTCGTGCTCGGCGGTGTGTCCGGGATCCGCGTCAACGTCATCCGGCTCCCGT 293
consensus_4086#1      CGCTGCTCGTCCTGCTCGGCGGGCACGCGGCCGCGCGCATCCGGGTGGAGCACTCCGGGA 357
                      **** **  ** **********     * *     *** **   **    *    *  * 

consensus_4086#0      CGGCGTCGCCGTTCCCGGCGTTCCGGGAGGCGCCGGCGTTCAGGAATGGCGACGGGTGCC 353
consensus_4086#1      TGGTGATCCGGCGGCCGTCGTC---GTCCATCCCGAGCTTCCGGGAGGCCCCCGCGTTCC 414
                       ** *   * *   *** ***    *      ***   *** ** * * *  ** ** **

consensus_4086#0      -CGCCGGCGAGGGGGTCGGCGGCGGCGGAGGGGGGGCGGGTGGACGTGGCCATGACGCTC 412
consensus_4086#1      GCAACGGCGAGGAGTGCGGCGGCGG-------GGGGAGGGTGGACGTGGCCATGACGCTG 467
                       *  ******** *  *********       **** ********************** 

consensus_4086#0      GACGCCAACTACCTGAGGGGCACCATGGCCGCCGTGTTCTCCATCCTGCAGCACACGGCG 472
consensus_4086#1      GACGCCAACTACCTCCGGGGCACCATGGCCGGCGTGCTGTCCATCCTGCAGCACACGGCG 527
                      **************  *************** **** * *********************

consensus_4086#0      TGCCCGGAGAGCGTCGCGTTCCACTTCCTCGCCGCGCGCTCCGACCCGGACGCCGGCGAC 532
consensus_4086#1      TGCCCGGAGAGCGTGTCGTTCCACTTCCTCGCGGC------CGGGATGGACGCC---GAC 578
                      **************  **************** **      **    *******   ***

consensus_4086#0      CTCGCCGCCGCCATCCGCGCCACCTTCCCCTACCTCGGCGCCGCCGTCAGCGTCTACCGC 592
consensus_4086#1      CTCGCGGCGGCGGTGCGCGCCACGTTCCCGTACCTGGACC------TCCGCGTGTACCGC 632
                      ***** ** **  * ******** ***** ***** * *       ** **** ******

consensus_4086#0      TTCGACCCGTCGCGCGTCCGCGGCCGCATCTCCCGCTCGGTGCGCCGCGCGCTCGACCAG 652
consensus_4086#1      TTCGACCCGTCCCGCGTCCGCGGCCGCATCTCCCGCTCCATCCGCCACGCGCTCGACCAG 692
                      *********** **************************  * **** *************

consensus_4086#0      CCGCTCAACTACGCGCGCGTCTACCTCGCCGACACGCTCCCCGCCGGCGTGCGCCGCGTC 712
consensus_4086#1      CCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTCCCGCCCGACGTGCGCCGCGTC 752
                      ****************** **********************  *** *************

consensus_4086#0      CTCTACCTCGACTCCGACGTCGTCGTCGTCGACGACGTGCGGAAGCTCTGGTCGGTGGAC 772
consensus_4086#1      ATCTACCTCGACTCCGACGTGGTGGTCGTCGACGACATCCGCGCGCTGGCGTCCGTCGAC 812
                       ******************* ** ************ * **   ***   *** ** ***

consensus_4086#0      CTCGCCGGGCACGTGGTGGCGGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTC 832
consensus_4086#1      CTCGGCGGCCACGTCGTCGGCGCGCCCGAGTACTGCCACGCCAACTTCACCAACTACTTC 872
                      **** *** ***** ** *  ***** ************************** ******

consensus_4086#0      ACCGACGCGTTCTGGTCGGACGGCGAGCTCAGCGGCGCCGCGTTCCGACGCGGCCGCCGC 892
consensus_4086#1      ACCGACGCGTTCTGGTCGGACCCGGCGCTCAACGGCAC---GTTC---GCCGGCCGCCGC 926
                      *********************   * ***** **** *   ****     **********

consensus_4086#0      CGGCCGCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACATGGGGCGGTGGCGTGAC 952
consensus_4086#1      C------CGTGCTACTTCAACACCGGCGTCATGGTCATGGACGTCGGCAAGTGGCGCGCC 980
                      *      ********************** ***** ****** * **   ****** * *

consensus_4086#0      GGCGGGTACACGCGGCGGGTGGAGGAGTGGATGGCGGTGCAGAAGCGGAGGCGGATCTAC 1012
consensus_4086#1      GGCGGCTACACCCGCCGCGTCGAGCGGTGGATGGAGGTGCAGAAGCAGACGCGGATCTAC 1040
                      ***** ***** ** ** ** ***  ******** *********** ** **********

consensus_4086#0      CACCTCGGCTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGACATCAAGGCGGTGGAT 1072
consensus_4086#1      CACCTCGGCTCGCTGCCGCCGTTCCTCCTCGTTCTCGCCGGTGACATCCAGGCCGTCGAC 1100
                      ************************** ** ** ******** ****** **** ** ** 

consensus_4086#0      CACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGCGGAGGGGAAATGCCGGAGCCTG 1132
consensus_4086#1      CACCGCTGGAACCAGCACGGCCTCGGCGGCGACAACGTCAAGGGGCGGTGCCGTGGCCTC 1160
                      ***** ************** ****************   *****   *****  **** 

consensus_4086#0      CACCCGGGCCCGGTCAGCCTCCTCCATTGGAGTGGCAAGGGGAAGCCATGGCTGCGCCTC 1192
consensus_4086#1      CACCCGGGGCCCATCAGCCTCCTCCATTGGAGCGGCAAGGGGAAGCCATGGATCCGGCTC 1220
                      ******** **  ******************* ****************** * ** ***

consensus_4086#0      GACTCGCGGAAGCCCTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTACAAGGCC 1252
consensus_4086#1      GACGCGCGGCGCCCGTGCGCCGTCGACTACCTCTGGGCGCCGTACGACCTCTTCC-GGCC 1279
                      *** *****   ** ************************************* *  ****

consensus_4086#0      GCCGT-ACCCGCGCTCGAGGAGTGAGCTAGCTAGCTAGCTCGCCGCCGGCGAGCCGAGGC 1311
consensus_4086#1      ATCGTCGCCGGTGCTCGAGGAGTGAGCAGCAGCAGCATCGAGCCATGCACAAGCTAAACT 1339
                        ***  ** * ***************         * *  ***     * ***  *   

consensus_4086#0      GGCGGCGTGATTGCATTGCATGCATTCGAGGGCAGACATACGAGAGAAGAGGAGAGAGGG 1371
consensus_4086#1      GATCAATCTCCTACTTTGTTCTTGCAGAAGCTTAAAGATTTTTTTTAAAAAAAAAGAAAG 1399
                      *          * * ***          **   * * **       ** *  * ***  *

consensus_4086#0      AGAGGGAGAGGAGGTGTGTACACGTACGTACGCACGTGCGTGCGTGCATGCATGCATGCA 1431
consensus_4086#1      AAGTTGGCAAGA-------ACATG-ATGAAGAAATTGATTTTTCTTCAAAGGAAAAGGAG 1451
                      *    *  * **       *** * * * *   *      *   * **       * *  

consensus_4086#0      TGTGTCCATACGTGCAAAACACAAAAGGGGCAAAAAAAAAAAAAAGTTGTGACGTCATGC 1491
consensus_4086#1      AAGAAATTAATGTGCAATCAGCAATGGGTGCTATGATCTGTGCTGCTAGCTGC-TGTTTT 1510
                               * ******    ***  ** ** *  *          * *   * *  *  

consensus_4086#0      AAAACGGCACAAATAAGATTAATTAGGACTGGAAGTGGTGAAGAAATACATGCCAAGAGG 1551
consensus_4086#1      GGGGGGTCTCGATTGGGA--AATTAAG-CAAAAATCGATGAGGATATGAACGT---GCGA 1564
                           * * * * *  **  ***** * *   **  * *** ** **  * *    * * 

consensus_4086#0      ATCAATGGAAGGAAGGCGCTCCGTCTCGTAGAAAAACTAATCCTAATTACGAATCTAAAT 1611
consensus_4086#1      ATTGCTTCATGA-----------TCTCTTTGG----TTTATCTTGTATAGGACACAATGT 1609
                      **   *  * *            **** * *      * *** *   ** **  * *  *

consensus_4086#0      ACATATGTATCTAGGTTTATAACTAGGATTGACTTTTTTTTACAGAGTAGTACATATGTG 1671
consensus_4086#1      -----TGTAATTAATTTTGTG---AGGATTAG------TGTGAATACTGGGAGCTAGGTG 1655
                           ****  **  *** *    ******        * *  * * * * *  ** ***

consensus_4086#0      GATGCATGTGCCGATCTCTTTTTCTTTCTTCCTCTTGTTTTGGGTTCCTTGAAAAATTTT 1731
consensus_4086#1      GGGGAAGGAACCGACTTACTCTGAC----------------------------------- 1680
                      *  * * *  ****  *  * *                                      

consensus_4086#0      CTACCGTTGAATTTGATTCATCATGGTGACGATGATGTACATAGGTGTTTTGATTGGAGT 1791
consensus_4086#1      ------------------------------------------------------------
                                                                                  

consensus_4086#0      ACGATGTGTAAAAAATTAGGGTGGTGAGATCAGAAGTGGGTGG 1834
consensus_4086#1      -------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)