These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4088#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 616 fasta sequence [GGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCATTCCATCGAGGAA-GGAGAAGTACTCGGAACGGGGACGATCGTCGAGATGGG--CACAGTG-ATGTGGGGAT-GCA-GTTAATATATTTGTGCAGGTTCTTCG-AAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAACAATTGGAGATGATTTGACAAGATTATGAAGGGC-AGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCA-TT-GCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGA-GTTTTCTTTTGTAAAACCAACCCTGGCTAATGT-AAACTAATGTAATGCA-ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG-TTTAT-CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC-ACATGAGATG-AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA] [+] EMBL CA766540 [GGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCATTCCATCGAGGAA GGAGAAGTACTCGGAACGGGGACGATCGTCGAGATGGG CACAGTG ATGTGGGGAT GCA GTTAATATATTTGTGCAGGTTCTTCG AAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAACAATTGGAGATGATTTGACAAGATTATGAAGGGC AGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCA TT GCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGA GTTTTCTTTTGTAAAACCAACCCTGGCTAATGT AAACTAATGTAATGCA ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG TTTAT CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGACGATCAAAGTTGAGAGAGCTTACAACATGAGATGNCGCTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTA ] [+] EMBL BI809805 [ CATCGAGAAAGGGAGAAGTACTCGGATCGGGGACGATCGTCGAGATGGGCACACAGTGAATGTGGGGATCCCACGTTAATATATTTGTGCAGGTTCTTCGAAAAGATGTTCATTTGAAGAACAATATATTTCTGTTCCGCCGAAAC ATTGGAGATGATTTGACAAGATTATGAAGGACAAGATTCCAGAGGTTTTATATGCCAAGGCGCTAAGTTGTTCAGGCACCAGTTGGCCGCCGAGGACATCCCAGTATTAGCAATTTGCATCAGAGGTTTTCTTTTGTAAAAACCACCCTGGCTAATGTAAAACTAATGTAATGCACATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAGTTTTATCCGAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC ACATGAGATG AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA] [+] EMBL BI809936 [ AATGT AAACTAATGTAATGCA ATGGAGCTTTCAACTCTGGTAGAAATTTCACTGTTTGCTTGTAAAG TTTAT CAAAAAATTGCATGGTGGACAGACTCTCAACTCTCAAGCATCTCTAGATTGATCAAGGTTGGAGAAAACTTGTTTCTGGAGCATGGAGATGATCAAAGTTGAGAGAGCTTAC ACATGAGATG AACTCTCAAATATCCCATTTGCTTGTTGGGGAGATGGTCACGATGAATTATAAGAAAGAAAGATCAATATATACGATTTTATTTGGGAAAGATAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||