These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4091#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2248 fasta sequence [GTCACGCGCGCTCGCGCGCAGGAATCTCACATGCTGCTGCTGCCGCTGCTGCTGCTGGTGTGGTGGTAGGTTCCAGCTCCGTGAACCGGCAAAAAAAATCCTCCCCGTCTCGCCGCCCGCCGCGCCCGCGCCGCGCTTCTAACCCCCACCCACCCACCCACCGCCCGCGCGCGCGCGCGCGTCGGTGCTCCACCTGCATCCTCTAATCCCCGCGTGGGCGGCGCCTTGTCTGATCTGGTTGCCAGCCACAGCTCGCGGGATCTCGCGTGTTTCGGTGGAGGGGATTGCGGCGCCGTGTGATTCGGCGATTGGGATGAGAGAGGGGAGGCGGCGGCTGCGGCGGTGGCGATGAGTGGCTCGGCGGCGACGCTGGGGATGCGGTGCGGGAGCTACGGCTCCCTCGCGTCGGCCGGCGGCGGGAGGAAGGGCGGGGGCAGGGGGTGGGGGTGGCGAGGCGGCGGGGAGAAGGAGCGGCTGCAGCTGCTCCACCGCGCGCTGCGGCTGGTGGGCCGCCGGAGGGCCGGGGTGCTGCTGCTGCTCGCCGCTGCCTCCGCCGCCGTCTTCTGCTCCATCTTCGCCGTCGTCAAAGATGATAATGCTTCAATGATCATTGCAAATAACTATGAAGTCGCAAATACCATACAGAACTCTGTGTATCCCAGCATGACAAGGCCTCTAATGACGTCCAGCGACCAATTCTCTGCTAGTAGCGTCAACAAAACTGAACTTCCAAATCGACTTCGTCTTTCATTTGCAAACTTTACACATCATCCTTGTGAAGGTTTCTCAGTTGCCCCTCCCCTGGTTGATCCGAAACGCACTGGACCACGACCATGTGATGTTTGCTACGTGCCTGTAGACCAGGCGTTCGCTCTTATGCCTCCACAACCTTCACCATCTCCTGTCCTTAAGAACTTAAGTTATGTATTTGAAGACAACATCACTGCAAATTTCTCAAATCAGGGCTCTGTATTTGGTGGGCATCCATCTCTGGAGCAGAGAAATAAATCTTTTGACATTAGTGAGTCTATGACTGTCCACTGTGGCTTTGTTAGAGGAAAGAAACCTGGCCAAGGTTCTGGATTTGATATCAATGATGATGATCTGTTAGAGATGGAGAAATGCCGTGAGCTGGTTGTAGCTTCTGCTATTTTTGGGAATTATGATATGATTCAACATCCAAGGAATGCCAGCGAATTTTCAAAGGCAAATGCATGTTTTTATATGTTTGTAGATGAAGAAACAGAGGCTTATGTAAAAAATTCTAGCTCATTGTACAGAAACAACAAAGTTGGCTTATGGAGGCTAGTGGTCGTTCGAAATCTCCCATACGAAGATCCAAGGCGTACGGGGAAGATTCCTAAGCTTCTGCTCCATAGGCTTTTTCCAAATGTGAGATTTTCAGTTTGGATAGATGCAAAGCCTTAAGCTCGTTGTGGACCCTTATCTACTGCTTGAGAGGTTTTTGTGGAGGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGCCTTTGGTTCAATGAAGTTGACCGTTTCACCTCCAGGGATCAAATTAGTTTCAGCACCGT-CCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAA-CTTCGTTATTCAGGGATACCACAGGGAGCTACTAGAGC-AAAT-GATTGCA-TCC-GGTTGG-AAGCCCCC--TCCAA-CGGCC-AG-TGAA-CCAT-CTCGAAAACTCAGATTAGGTAGCAGGAAAGCTCCTCCATCAAAGAAGTCTTCCATGAAGCGGAAAAGAGTGAAGAAATCGAGCTCGCGGAGGCGTCTCCCCAAACCAATCACTAGGATGACTGATACTACTACCTGGCAAAAGTTGGGCGCATGATGATCCAGGGCTCTTTCCTCTTTGTTGACACAATTCACTTTGCTGGAGGGCGAGCTCATTCTATTAGGACACATACTTGTAGTTTTTTTTCCCTCCGACGAGATTTGTTCATAGTTTATTCTTGATTGTTGGTGTAAATAACAGCGAAAGCAATATAATCAAATATTTTCG] [+] EMBL AK120867 [GTCACGCGCGCTCGCGCGCAGGAATCTCACATGCTGCTGCTGCCGCTGCTGCTGCTGGTGTGGTGGTAGGTTCCAGCTCCGTGAACCGGCAAAAAAAATCCTCCCCGTCTCGCCGCCCGCCGCGCCCGCGCCGCGCTTCTAACCCCCACCCACCCACCCACCGCCCGCGCGCGCGCGCGCGTCGGTGCTCCACCTGCATCCTCTAATCCCCGCGTGGGCGGCGCCTTGTCTGATCTGGTTGCCAGCCACAGCTCGCGGGATCTCGCGTGTTTCGGTGGAGGGGATTGCGGCGCCGTGTGATTCGGCGATTGGGATGAGAGAGGGGAGGCGGCGGCTGCGGCGGTGGCGATGAGTGGCTCGGCGGCGACGCTGGGGATGCGGTGCGGGAGCTACGGCTCCCTCGCGTCGGCCGGCGGCGGGAGGAAGGGCGGGGGCAGGGGGTGGGGGTGGCGAGGCGGCGGGGAGAAGGAGCGGCTGCAGCTGCTCCACCGCGCGCTGCGGCTGGTGGGCCGCCGGAGGGCCGGGGTGCTGCTGCTGCTCGCCGCTGCCTCCGCCGCCGTCTTCTGCTCCATCTTCGCCGTCGTCAAAGATGATAATGCTTCAATGATCATTGCAAATAACTATGAAGTCGCAAATACCATACAGAACTCTGTGTATCCCAGCATGACAAGGCCTCTAATGACGTCCAGCGACCAATTCTCTGCTAGTAGCGTCAACAAAACTGAACTTCCAAATCGACTTCGTCTTTCATTTGCAAACTTTACACATCATCCTTGTGAAGGTTTCTCAGTTGCCCCTCCCCTGGTTGATCCGAAACGCACTGGACCACGACCATGTGATGTTTGCTACGTGCCTGTAGACCAGGCGTTCGCTCTTATGCCTCCACAACCTTCACCATCTCCTGTCCTTAAGAACTTAAGTTATGTATTTGAAGACAACATCACTGCAAATTTCTCAAATCAGGGCTCTGTATTTGGTGGGCATCCATCTCTGGAGCAGAGAAATAAATCTTTTGACATTAGTGAGTCTATGACTGTCCACTGTGGCTTTGTTAGAGGAAAGAAACCTGGCCAAGGTTCTGGATTTGATATCAATGATGATGATCTGTTAGAGATGGAGAAATGCCGTGAGCTGGTTGTAGCTTCTGCTATTTTTGGGAATTATGATATGATTCAACATCCAAGGAATGCCAGCGAATTTTCAAAGGCAAATGCATGTTTTTATATGTTTGTAGATGAAGAAACAGAGGCTTATGTAAAAAATTCTAGCTCATTGTACAGAAACAACAAAGTTGGCTTATGGAGGCTAGTGGTCGTTCGAAATCTCCCATACGAAGATCCAAGGCGTACGGGGAAGATTCCTAAGCTTCTGCTCCATAGGCTTTTTCCAAATGTGAGATTTTCAGTTTGGATAGATGCAAAGCCTTAAGCTCGTTGTGGACCCTTATCTACTGCTTGAGAGGTTTTTGTGGAGGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGCCTTTGGTTCAATGAAGTTGACCGTTTCACCTCCAGGGATCAAATTAGTTTCAGCACCGT CCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAA CTTCGTTATTCAGGGATACCACAGGGAGCTACTAGAGC AAAT GATTGCA TCC GGTTGG AAGCCCCC TCCAA CGGCC AG TGAA CCAT CTCGAAAACTCAGATTAGGTAGCAGGAAAGCTCCTCCATCAAAGAAGTCTTCCATGAAGCGGAAAAGAGTGAAGAAATCGAGCTCGCGGAGGCGTCTCCCCAAACCAATCACTAGGATGACTGATACTACTACCTGGCAAAAGTTGGGCGCATGATGATCCAGGGCTCTTTCCTCTTTGTTGACACAATTCACTTTGCTGGAGGGCGAGCTCATTCTATTAGGACACATACTTGTAGTTTTTTTTCCCTCCGACGAGATTTGTTCATAGTTTATTCTTGATTGTTGGTGTAAATAACAGCGAAAGCAATATAATCAAATATTTTCG] [+] EMBL CA764824 [ aggggGATCCAAGGCGTACGGGGAAGATTCCTAAGCTTCTGCTCCATAGGCTTTTTCCAAATGTGAGATTTTCAGTTTGGATAGATGCAAAG CTTAAGCTCGTTGTGGACCCTTATCTACTACTTGAGAGGTTTTTGTGGAGGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGTCTTTGGTTCAATGAAGTTGACCGTTCCACCTCCAGGGATCAAATTAGTTTCAGCACCGTCCCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAACCTTCGTTATTCAGGGATACCGCAGGGAGCTACTAGAGCAAAATGGATTGCATTCCGGGTTGGAAAGCCCCCCTTNCAANGGGCCNAGTTGAANCCATCCTCCAAA ] [+] EMBL AK059402 [ GGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGCCTTTGGTTCAATGAAGTTGACCGTTTCACCTCCAGGGATCAAATTAGTTTCAGCACCGT CCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAA CTTCGTTATTCAGGGATACCACAGGGAGCTACTAGAGC AAAT GATTGCA TCC GGTTGG AAGCCCCC TCCAA CGGCC AG TGAA CCAT CTCGAAAACTCAGATTAGGTAGCAGGAAAGCTCCTCCATCAAAGAAGTCTTCCATGAAGCGGAAAAGAGTGAAGAAATCGAGCTCGCGGAGGCGTCTCCCCAAACCAATCACTAGGATGACTGATACTACTACCTGGCAAAAGTTGGGCGCATGATGATCCAGGGCTCTTTCCTCTTTGTTGACACAATTCACTTTGCTGGAGGGCGAGCTCATTCTATTAGGACACATACTTGTAGTTTTTTTTCCCTCCGACGAGATTTGTTCATAGTTTATTCTTGATTGTTGGTGTAAATAACAGCGAAAGCAATATAATCAAATATTTTCG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||