These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4662 fasta sequence [CATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGATGTGTATTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGCTACATCTTATAAGATAATTGTTACAGTCCCAAAAAGAATAACGTGGAAATGGTATCCAATAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATCACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCTCCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGGACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATGCATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGAGCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGAGCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCTTGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTACTAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCTGAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAACTTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATCAATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAGTTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCTAGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAAGTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACTCAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATCCATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAACATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGCCCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGTGGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAGGTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCATCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATGCCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTTTCTAAGTGTTAAAAAAAAAAAA] [+] EMBL AB103395 [CATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGATGTGTATTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGCTACATCTTATAAGATAATTGTTACAGTCCCAAAAAGAATAACGTGGAAATGGTATCCAATAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATCACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCTCCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGGACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATGCATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGAGCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGAGCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCTTGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTACTAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCTGAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAACTTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATCAATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAGTTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCTAGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAAGTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACTCAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATCCATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAACATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGCCCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGTGGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAGGTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCATCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATGCCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTTTCTAAGTGTTAAAAAAAAAAAA] [+] EMBL AK120933 [ TATTGATGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCATGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAACAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATCTCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATTGCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGATCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACTAGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGGGAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAACCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCCTGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGGTCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAATTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAACTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATTGCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCAAATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACCACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATCTGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTTCAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACAATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTCTGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACCCTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGACATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCATAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATTCGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAGCAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAACTGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGAGCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAAGGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGGCCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTTTCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGGCTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCTCGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCTCAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCATATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAGGGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGACATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCACGAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACCTACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGATCGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCGGGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAAGAGGCCGACAATGCTGGAGGTGGTGAGGGGGCTCAAGATGACCCACGGCATGGAATGTGGACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAACTAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTAGCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTTCAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTTCCTGTGGCAATGTGAGTG ] consensusID : consensus_4103#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTCATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTACCTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACCTGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATCAACTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA] [-] EMBL CA760725 [TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTCATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTACCTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCTCCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGATCAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAAGATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACACAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTTTGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTGTTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAGGTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACCTGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATCAACTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4103#0 ------------------------------------------------------------ consensus_4103#1 TGTGCCTCTGGGTAGTGTCTTCCTGTGCCCGTCTTTATGATGTTTGGTTGATTCTGTTTC 60 consensus_4103#0 ------------------------------------------------------------ consensus_4103#1 ATCCGATNTGATATAAAGCTGTACTCCTAGCACGTACTGTACTGTAGTGCCTTTTCCTAC 120 consensus_4103#0 --------------------------------------CATGGGCTTCTTGATCCTATCT 22 consensus_4103#1 CTTTTCTTGTGCTTGTGATGGATCGTGGATGGATGTTTCATGGGCTTCTTGATCCTATCT 180 ********************** consensus_4103#0 CCAGGTTTTTAGGCTTTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGAT 82 consensus_4103#1 CCAGGTTTTTAGGCTNTACGATGAGTGGTTTGCGTAACTTCTGCTTTTATTCTTGCTGAT 240 *************** ******************************************** consensus_4103#0 CAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAA 142 consensus_4103#1 CAGAGAGCAGTTCCTGGTTTTTGTTATGATGGTGTTGTTTCTTTTGGGGGCTAAGACCAA 300 ************************************************************ consensus_4103#0 GATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACA 202 consensus_4103#1 GATAATAGTATTAGTATATCCTTGTGGAGTTGTTGGAGCTATAGTGGCAACTGCCAAACA 360 ************************************************************ consensus_4103#0 CAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTT 262 consensus_4103#1 CAGCCCAACCAGCATTGCTTCGAGTCCTTCCACTAGATGTTGATTCAAGTAGGATAGGTT 420 ************************************************************ consensus_4103#0 TGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTG 322 consensus_4103#1 TGCTTGTTTCATGTTCTTGTACATTTGAGCTGACAATCGCATGAAAGCTGAGTGTTCCTG 480 ************************************************************ consensus_4103#0 TTCTTTTCTAATTGTTCAGGATGCATTTCTGAGAGGGCGTAATGGTTCAGACTGCAGAAG 382 consensus_4103#1 TTCTTTTCTAATTGTTCAGGATGCATTTTTGAGAGGGCGTAATGGTTCAGACTGCAGAAG 540 **************************** ******************************* consensus_4103#0 GATGTGTA-TTGCACAGTTTTATCTGTCAGTCATCTATATCCTACTTGAAGTTACAAGGC 441 consensus_4103#1 GTAATGAAATTGAAGTTCTTCCTTTGTGCTGAATGTTTGTAGAGCTTACAGTAGTGCACC 600 * ** * *** * ** * *** ** * * * *** *** * consensus_4103#0 TACATCTTATAAGATAATTGTTACAGT-CCCAAAAAGAATAACGTGGAAATGGTATCCAA 500 consensus_4103#1 TGGCATGAATTACATGAATCTTGCATCACCTCTTGCTCATTTGAGAGAAGTGGTATC-AA 659 * ** * ** * * ** ** ** ** *** ******* ** consensus_4103#0 TAGTTTCTGGCTTTTCATCCTGCTAGTGAGCTTCATCCCCATTTCTGCTTGGGCAGAATC 560 consensus_4103#1 CTCTAACGAATTCTTTGCGTCAAAAAAAAAAAAA-------------------------- 693 * * * ** * * consensus_4103#0 ACGTGATATAAGTACTCTGTTCACTCTGAGGGATTCAATCACCGAAGGAAAAGGCTTTCT 620 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCGTAACTGGTTTGATTCGGAAACTCCCCCATGCAGCTGGTCAGGCATAACTTGCATAGG 680 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 ACATAATGTTGTGGCGATTGATTTGTCCTCTGTTCCACTCTATGCTCCGTTTCCATTATG 740 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CATTGGGGCATTCCAGTCACTTGTTCGGCTCAACTTCAGTGGATGTGGGTTTTCCGGAGA 800 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCTTCCGGAAGCTTTGGGAAATTTGCAGAATCTCCAGTACCTAGACTTGAGCAATAACGA 860 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCTTACTGGGCCAATACCTATCTCACTATATAACCTGAAGATGCTGAAGGAAATGGTGCT 920 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGACTACAACTCCTTGTCAGGACAACTTAGTCCTGCTATTGCTCAGCTGCAGCACCTTAC 980 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TAAGCTATCTATATCCATGAATTCCATCTCCGGAAGCCTTCCACCAGATCTGGGCAGCCT 1040 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GAAGAACCTGGAGTTGTTGGACATTAAGATGAACACATTCAATGGATCTATACCAGCAAC 1100 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TTTTGGGAACCTGTCTTGTCTCTTGCACTTTGATGCTAGCCAGAATAACCTAACTGGATC 1160 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 AATATTCCCTGGAATAACCTCGTTGACAAACCTATTGACACTTGATCTATCATCAAACAG 1220 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TTTTGAGGGAACAATTCCTAGGGAGATTGGTCAACTGGAAAATCTGGAATTACTGATTCT 1280 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 AGGAAAGAATGATCTCACTGGAAGGATTCCACAAGAGATTGGTAGTCTGAAGCAGCTTAA 1340 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GTTACTTCATCTCGAGGAATGTCAGTTCACAGGCAAAATACCTTGGTCAATCAGTGGACT 1400 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAGCAGCTTGACAGAACTTGACATATCAGATAACAACTTTGACGCTGAGCTCCCATCATC 1460 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CATGGGTGAGCTTGGCAATCTAACACAGCTGATTGCAAAGAATGCTGGGCTCAGTGGGAA 1520 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CATGCCAAAAGAACTTGGGAATTGCAAGAAGCTTACTGTTATAAACCTGTCATTCAATGC 1580 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCTTATTGGACCTATTCCTGAAGAATTTGCAGATTTAGAGGCTATTGTCTCATTTTTTGT 1640 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GGAAGGAAATAAACTATCGGGTCGTGTCCCAGATTGGATTCAGAAATGGAAAAATGCAAG 1700 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GTCCATCAGGTTGGGACAGAACAAATTCAGTGGACCTTTGCCAGTGCTGCCATTGCAGCA 1760 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCTGCTAAGTTTCGCTGCAGAATCCAACCTTCTCTCAGGTTCTATACCTTCTCACATATG 1820 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCAAGCCAACTCCTTGCATTCACTCTTATTGCATCATAACAATCTGACTGGGACTATTGA 1880 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGAGGCATTTAAAGGGTGCACGAACCTCACTGAATTGAACTTGTTAGACAACCATATTCA 1940 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGGGGAGGTACCAGGATATTTAGCAGAATTACCCCTGGTTACTCTGGAGTTGTCACAAAA 2000 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAAATTCGCAGGGATGTTACCTGCGGAGCTGTGGGAGTCAAAAACCCTTCTAGAGATATC 2060 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCTCAGTAACAATGAAATTACCGGCCCAATACCTGAGAGTATTGGTAAACTCTCTGTATT 2120 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCAAAGGTTGCATATAGACAATAACTTACTCGAAGGGCCTATCCCTCAGTCTGTTGGTGA 2180 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCTAAGGAATCTGACCAATCTATCCCTGCGTGGCAATAGGTTATCTGGGATCATTCCACT 2240 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 AGCACTTTTCAACTGCAGAAAACTTGCCACGCTGGACTTGAGCTATAACAATCTGACTGG 2300 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GAACATTCCAAGTGCCATATCTCACTTGACATTGCTTGATAGCTTGATTTTGTCTTCCAA 2360 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCAGCTGTCTGGTTCTATCCCTGCTGAGATTTGCGTGGGATTTGAGAATGAGGCTCACCC 2420 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGACTCAGAGTTTCTTCAGCACCATGGTCTTCTTGATCTGTCATACAACCAATTGACTGG 2480 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCAGATCCCAACATCTATAAAGAACTGTGCAATGGTGATGGTGCTCAACCTCCAAGGCAA 2540 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TTTGCTGAATGGCACCATTCCTGTGGAGCTTGGCGAGCTAACAAATCTTACATCCATTAA 2600 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CTTGTCATTTAATGAATTTGTTGGACCAATGCTTCCATGGTCTGGACCTTTGGTTCAATT 2660 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCAAGGCCTTATTCTGTCCAATAACCACCTAGATGGCTCCATTCCTGCTAAGATAGGCCA 2720 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 AATCCTTCCCAAAATTGCAGTGCTAGACTTGTCAAGCAATGCACTCACTGGCACTCTACC 2780 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 ACAGTCTTTGCTCTGCAACAATTACCTAAACCATCTGGATGTCAGCAACAACCACCTATC 2840 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGGGCATATCCAGTTCTCTTGCCCCGATGGCAAAGAATACTCAAGTACACTGCTCTTCTT 2900 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAATTCAAGCAGCAACCATTTCTCAGGGAGCCTAGATGAGTCTATCTCGAACTTCACACA 2960 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 ATTGTCTACTCTTGATATCCACAACAATAGCCTCACTGGAAGGTTGCCTTCAGCACTTTC 3020 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGATCTCAGTTCTTTGAATTATCTTGATCTGTCGAGCAACAATCTCTATGGTGCCATACC 3080 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CTGTGGAATCTGCAATATATTTGGCCTCTCATTTGCCAACTTCTCAGGTAACTATATTGA 3140 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CATGTACAGCTTGGCAGATTGTGCTGCAGGAGGCATTTGTTCTACTAATGGTACTGATCA 3200 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TAAAGCATTGCATCCATATCATCGGGTTCGAAGGGCAATTACCATCTGTGCCTTTACATT 3260 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CGTCATCATCATTGTTTTAGTGCTTCTGGCTGTTTATCTGAGACGGAAGCTGGTTAGAAG 3320 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAGGCCTTTGGCTTTTGAATCTGCCAGTAAGGCCAAGGCTACAGTTGAGCCTACCTCAAC 3380 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TGATGAACTGCTAGGAAAGAAGTCAAGGGAACCTCTGAGTATCAATCTTGCAACATTTGA 3440 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCATGCACTTCTGAGGGTCACCGCGGATGATATTCTGAAAGCCACAGAAAACTTCAGTAA 3500 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GGTGCACATAATAGGTGATGGTGGATTTGGCACTGTCTACAAGGCAGCGCTCCCTGAAGG 3560 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCGGAGAGTCGCGATCAAGAGGCTCCATGGTGGCCATCAGTTCCAAGGTGACCGTGAGTT 3620 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCTAGCTGAGATGGAGACAATTGGAAAGGTGAAACATCCAAACCTCGTCCCTCTACTTGG 3680 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CTACTGTGTTTGTGGCGATGAACGATTCCTGATCTACGAGTACATGGAGAATGGGAGCCT 3740 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CGAGATGTGGCTGAGAAACCGAGCAGATGCACTTGAAGCTCTTGGATGGCCGGACCGTCT 3800 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAAGATCTGCCTCGGTTCAGCCCGTGGGCTCGCCTTCCTGCATCATGGCTTTGTGCCCCA 3860 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TATCATCCACCGGGACATGAAGTCGAGCAACATTCTACTGGATGAGAACTTCGAGCCGAG 3920 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GGTCTCTGACTTCGGCCTTGCAAGGATCATCAGTGCCTGTGAGACCCATGTCAGCACTGA 3980 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CATTGCCGGTACATTTGGATACATTCCTCCGGAGTATGGCCTCACAATGAAGTCCACCAC 4040 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GAAAGGCGACGTCTACAGCTTCGGCGTCGTCATGCTGGAGCTCCTCACCGGACGGCCACC 4100 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TACAGGCCAGGAGGAGGTGCAAGGGGGTGGAAACCTCGTCGGCTGGGTGCGGTGGATGAT 4160 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CGCCCGCGGTAAGCAGAACGAGCTGTTCGATCCATGCTTGCCGGTTTCAAGCGTGTGGCG 4220 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GGAGCAGATGGCGCGCGTGCTCGCCATCGCCCGGGACTGCACCGCCGACGAGCCGTTCAA 4280 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GAGGCCGACAATGCTGGAGGTGGTGAAGGGGCTCAAGATGACCCACGGCATGGAATGTGG 4340 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 ACCTCTGGTGGTGACCGTCTCCAGGGACATGTAATGCTCTCTGCTTGATCTTCCTGAAAC 4400 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TAATGTAGTAATAATGTAGTCAGTAGGGAGTAGGCTAATGGTAGTTAGGAGTAACTCGTA 4460 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 GCTATAGAGTAACCGAGCTATCTGGAGGCTGTAATGAGGGAAACTAGAGTTACTCATGTT 4520 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CAGGCTGTAGTTGGAACTAGTATTAAGACCTTTTATCTTGTACTATTGTCACTGGTGGTT 4580 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 CCTGTGGCAATGTGAGTGCTTAATGTGCTGTCGTTTGAATAAAAGTACTGCTTGCCTGTT 4640 consensus_4103#1 ------------------------------------------------------------ consensus_4103#0 TCTAAGTGTTAAAAAAAAAAAA 4662 consensus_4103#1 ---------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||