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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4107 cluster # 4107       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4107#0 length = 636 sequences # 3  

consensusID : consensus_4107#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 636
fasta sequence
                              [TTCATATACCAGAGACGACCATCCGTTGTACATCTTCTGATGTGGATCTACTGGAAAACACGTTCCAGAAGCGCATGTGGCACGATGCGTTCTCTTTTTCTTCAGATGGACAGAACACTTCAGGAGGAGGGGATGCATCTGGAGAATCGTTGAAGGAAGTGCAAGAAATGCAAATGAATTGTGAGAAAGGGCTCAGATACATGGCTTGCGAGGCTCCATTAGTAGGACC-ATGGCTGAATTATGGAAACTGAAGAACTCGGAGACTCCTGAGAGCGAGTGGGCAGTGCAAGCTGCTGCCGCTTCCATCT-ACTCGACTTGCAACCTGGTCATGAGAACCGAGAATGTTTCTTGCTTCTGATCTCTTCTCACAACTGGAATTAGTTTCTTGCTTCTTCTTTTTTCTTTTCTTTTTCATTTTACTGATCTTTACCTCAGTCAGCGTTGTGTGTTAGGTTATGTTTTTTTTTCTCTCTTTATCTATAGCCTGGCAATGATCTCATGTTGAGTAAATCTGCAGTGGTTTGTGCTGCACTGCTTCATGTAACGTGAAATACTCTGTAACGTCTGCTGTTTCCAACTTACAATTTCACAGCCGCGTGAAATAACAAATTTATTCCTGTAAAAAAAAAAAAAAAA]

[+] EMBL BM038713             [TTCATATACCAGAGACGACCATCCGTTGTACATCTTCTGATGTGGATCTACTGGAAAACACGTTCCAGAAGCGCATGTGGCACGATGCGTTCTCTTTTTCTTCAGATGGACAGAACACTTCAGGAGGAGGGGATGCATCTGGAGAATCGTTGAAGGAAGTGCAAGAAATGCAAATGAATTGTGAGAAAGGGCTCAGATACATGGCTTGCGAGGCTCCATTAGTAGGACC ATGGCTGAATTATGGAAACTGAAGAACTCGGAGACTCCTGAGAGCGAGTGGGCAGTGCAAGCTGCTGCCGCTTCCATCT ACTCGACTTGCAACCTGGTCATGAGAACCGAGAATGTTTCTTGCTTCTGATCTCTTCTCAC ACTGGAATTAGTTTCTTGCTTCTTCTTTTTTCTTTTCTTTTTCATTTTACTGATCTTTACCTCAGTCAGCGTTGTGTGTTAGGTTATGTTTTTTTTTCTCTCTTTATCTATAGCCTGGCAATGATCTCATGTTGAGTAAATCTGCAGTGGTTTGTGCTGCACTGCTTCATGTAACGTGAAATACTCTGTAACGTCTGCTGTTTCCAACTTACAATTTCACAGCCGCGTGAAATAAC AATTTATTCCTGTAAAAA           ]
[+] EMBL AU029749             [                                                                                                                                                                     AAATGCAAATGAATTGTGAGAAAGGGCTCAGATACATGGCTTGCGAGGCTCCATTAGTAGGACCAATGGCTGAATTATGGAAACTGAAGAACTCGGAGACTCCTGAGAGCGAGTGGGCNGTGCAAGCTGCTGCCGCTTCCATCT ACTCGACTTGCAACCTGGTCATGAGAACCGAGAATGTTTCTTGCTTCTGATCTCTTCTCACAACTGGAATTAGTTTCTTGCTTCTTCTTTTTTCTTTTCTTTTTCATTTTACTGATCTTTACCTCAGTCAGCGTTGTGTGTTAGGTTATGTTTTTTTNTCTCTCTTTATCTATAGCCTGGCAATGATCTCATGTTGAGTAAATCTGCAGTGGTTTGTGCTGCACTGCTTCATGTAACGTGAAATACTCTGTAACGTCTGCTGTTTCCAACTTACAATTTCACAGCCGCGTGAAATAACAAATTTATTCCTGTAAAAAAAAAAAAAAAA]
[+] EMBL AA753957             [                                                                                                                                                                                                                                                       ACTGAAGAACTCGGAGACTCCTGAGAGCGAGTGGGCAGTGCAAGCTGCTGCCGCTTCCATCTAACTCGACTTGCAACCTGGTCATGAGAACCGAGAATGTTTCTTGCTTCTGATCTCTTCTCACAACTGGAATTAGTTTCTTGCTTCTTCTTTTTTCTTTTCTTTTTCATTTTACTGATCTTTACCTCAGTCAGCGTTGTGTGTTAGGTTATGTTTTTTTTTCTCTCTTTATCTATAGCCTGGCAATGATCTCATGTTGAGTAAATCTGCAGTGGTTTGTGCTGCACTGCTTCATGTAACGTGAAATACTCTGTAACGTCTGCTGTTTCCAACTTACAATTTCACAGCCGCGTGAAATAACAAATTTATTCCTGTAAAAAAAAA       ]


>consensus_4107#0 TTCATATACCAGAGACGACCATCCGTTGTACATCTTCTGATGTGGATCTACTGGAAAACA CGTTCCAGAAGCGCATGTGGCACGATGCGTTCTCTTTTTCTTCAGATGGACAGAACACTT CAGGAGGAGGGGATGCATCTGGAGAATCGTTGAAGGAAGTGCAAGAAATGCAAATGAATT GTGAGAAAGGGCTCAGATACATGGCTTGCGAGGCTCCATTAGTAGGACCATGGCTGAATT ATGGAAACTGAAGAACTCGGAGACTCCTGAGAGCGAGTGGGCAGTGCAAGCTGCTGCCGC TTCCATCTACTCGACTTGCAACCTGGTCATGAGAACCGAGAATGTTTCTTGCTTCTGATC TCTTCTCACAACTGGAATTAGTTTCTTGCTTCTTCTTTTTTCTTTTCTTTTTCATTTTAC TGATCTTTACCTCAGTCAGCGTTGTGTGTTAGGTTATGTTTTTTTTTCTCTCTTTATCTA TAGCCTGGCAATGATCTCATGTTGAGTAAATCTGCAGTGGTTTGTGCTGCACTGCTTCAT GTAACGTGAAATACTCTGTAACGTCTGCTGTTTCCAACTTACAATTTCACAGCCGCGTGA AATAACAAATTTATTCCTGTAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)